Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate IR:Neg:B25P:Sug:08, complete genome.
ACC No: JQ707944
Dated: 2013-01-29 | Length: 2844 | CRC: -1410861832
ID JQ707944; SV 1; circular; genomic DNA; STD; VRL; 2844 BP.
XX
AC JQ707944;
XX
DT 28-MAY-2012 (Rel. 112, Created)
DT 29-JAN-2013 (Rel. 115, Last updated, Version 3)
XX
DE Beet curly top Iran virus isolate IR:Neg:B25P:Sug:08, complete genome.
XX
KW .
XX
OS Beet curly top Iran virus
OC Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
XX
RN [1]
RP 1-2844
RX PUBMED; 23081676.
RA Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.;
RT "Fulfilling Koch's postulates for beet curly top Iran virus and proposal
RT for consideration of new genus in the family Geminiviridae";
RL Arch. Virol. 158(2):435-443(2013).
XX
RN [2]
RP 1-2844
RA Heydarnejad J., Varsani A.;
RT "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique
RT geminivirus with a mastrevirus-like replication associated protein and
RT curtovirus-like capsid protein";
RL Unpublished.
XX
RN [3]
RP 1-2844
RA Heydarnejad J., Varsani A.;
RT ;
RL Submitted (25-FEB-2012) to the INSDC.
RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave,
RL Kerman 7616914111, Iran
XX
FH Key Location/Qualifiers
FH
FT source 1. .2844
FT /organism="Beet curly top Iran virus"
FT /host="Beta vulgaris"
FT /isolate="IR:Neg:B25P:Sug:08"
FT /mol_type="genomic DNA"
FT /country="Iran:Negar, Kerman"
FT /collected_by="J. Heydarnejad"
FT /collection_date="2008"
FT /clone="B25P"
FT /db_xref="taxon:391228"
FT gene 165. .434
FT /gene="V3"
FT CDS 165. .434
FT /codon_start=1
FT /gene="V3"
FT /product="ss-ds DNA regulator"
FT /db_xref="InterPro:IPR009997"
FT /db_xref="UniProtKB/TrEMBL:I3QQ92"
FT /protein_id="AFK14057.1"
FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF
FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA"
FT gene 241. .606
FT /gene="V2"
FT CDS 241. .606
FT /codon_start=1
FT /gene="V2"
FT /product="movement protein"
FT /db_xref="InterPro:IPR009931"
FT /db_xref="UniProtKB/TrEMBL:I3QQ93"
FT /protein_id="AFK14058.1"
FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL
FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD
FT RWEDSFEEIPMEETGSK"
FT gene 485. .1237
FT /gene="V1"
FT CDS 485. .1237
FT /codon_start=1
FT /gene="V1"
FT /product="capsid protein"
FT /db_xref="GOA:I3QQ94"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="UniProtKB/TrEMBL:I3QQ94"
FT /protein_id="AFK14059.1"
FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK
FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA
FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK
FT KWQTHLMSTGTDYGGKQIYKASSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA
FT ILYVVVNDNTDNTNMYATLFGNCRAYFY"
FT gene complement(1483. .1788)
FT /gene="C2"
FT CDS complement(1483. .1788)
FT /codon_start=1
FT /gene="C2"
FT /product="hypothetical RepB"
FT /db_xref="UniProtKB/TrEMBL:I3QQB5"
FT /protein_id="AFK14060.1"
FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS"
FT gene complement(1803. .2711)
FT /gene="C1"
FT CDS complement(1803. .2711)
FT /codon_start=1
FT /gene="C1"
FT /product="hypothetical RepA"
FT /db_xref="GOA:I3QQ96"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:I3QQ96"
FT /protein_id="AFK14061.1"
FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI
FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNNIGNSNVEWRRILDSSNTKEE
FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLTCSEDTNVLNLSRSQTTDQS
FT DQEVSTYADHPEQERPSGQDL"
XX
SQ Sequence 2844 BP; 804 A; 487 C; 662 G; 891 T; 0 other;
jq707944 Length: 2844 29-JAN-2013 Type: N Check: 8109 ..
1 ccgcgtttac ctttccacgt ggcgtatgct gagtgggcgg acggttgagt
51 ggggaacacg ctttacttta aattaaagta aagtagcact aagtgggacc
101 cactttttta tttctttaaa gactttcttt ttaagtcttc tagatgcgta
151 tattatacgt ataaatgatg gtctgtattc ccgactggtt atttctactt
201 ttcgtattta gtacgattct tcagtcggga attaatttct atggtacctt
251 tcagagtgag cgaatttccg cgaagctatc cagccttgct agccgtttcg
301 acgagctgtt tcttgcgtta caacaagtgg tgtttgctcg gaatcgagcc
351 tcaagttcgc gagccgttga ctctagagga aggcgaggac tttcttcaat
401 tccagaagga agtgaagaaa ttgctgaagc ttaaggttag ttttaagcgt
451 aagtgttgtt tgtacgagga catatacaag aagtatggcg gttcagagtc
501 aaaagagaaa gtatactcct ccggccagtt ggacgaggaa gaggaagacg
551 accggtggga ggacagtttc gaagaaatac caatggaaga gaccggttcg
601 aagtaaccgg gctgtgaagt tgaagatgta tgacgacatg ttaggtgcat
651 ctggagttgg atctaccatc agtaatgatg ggatgatcac tatgttgaac
701 aactatgttc aaggaattgg tgatagccag aggtcaaaca acttgaccgt
751 taccaggcat ttgaagtttg atatgtctct tatggctagt ggtgcatttt
801 gggcgagtcc taactatatg actcaatatc attgggttat tgtggatcgt
851 gatgttggtt ctacgtttcc gactcagttg agtactatct ttgatattcc
901 gactggtggt caggctatgc cttccactta tcggattagg agggatgcga
951 atgaacgatt tatcgtgaag aagaagtggc agactcattt gatgtctact
1001 ggtactgatt atggaggaaa gcagatctat aaggcgtctt caatgcctaa
1051 ttataagaaa gctatgaaca ttaatattcg gaatatcaat gtcaagacat
1101 tgtggaagga cactggaggt ggcaaatatg aagatgtgaa ggagaatgct
1151 attctttacg tagtggttaa tgataatact gataatacaa atatgtatgc
1201 tactttgttt ggtaattgta gggcttattt ctattgatta ttagaaatgc
1251 ccaatgatgt tgaagttgaa taaaaaattt attattaaat ttgtttgtgt
1301 aagattgaaa tgtagatatg taaatatcta gtataattgc cttggaaaac
1351 aaaaaacgaa aaaatgattg ccggaaaacg aaaaaaaaac ccctcagaaa
1401 ttagatcccc ggaaaatcaa tatatttata ttaatctgca gcccatccac
1451 gaagtggatg ttacatattt cgaagaaata gcttaactat accaaacttc
1501 atcacttgct aagtaatata catcgcaatt agcgtaaaac caatctttca
1551 tagattcact catacaaggt atccagtcca tatctggatt agtaatagca
1601 atacaaggtc ttccgcctgg aatgactaag tttggtttat gttttatcca
1651 aacactataa tcttcgttac atccgataat agatttaaac aactcctgtt
1701 gtattttttg atagcggata tcgtctatta tatggtatgt agtgtggtct
1751 atatcgtata gagaccaatc taataccatg ccagacatat agtggtgtcg
1801 gcctagagat cttgcccact gggtctttcc tgttctggat ggtccgcata
1851 tgtagagact tcttggtcgg actggtctgt tgtctggctc ctggacaaat
1901 taagtacgtt agtgtcttca ctacatgtta gatcgcgact aagtcgatct
1951 aggtggaagt attcttcaag agtcatttgt ctgtcttgaa gaattgctcc
2001 cctgcaattc tcacatattt cgtaatgtaa acaatctgaa cttacgaaat
2051 atatattttg ttccgcccac tctttgatag tgtcaggtag cctagagaac
2101 tccgtccatc tgggtgtgta aggttgcaca actggcctga aatgatagtt
2151 ggcgaaggat agaatggaag gccatctgag aacgaagtct gttgggcagg
2201 actctcgtat gttactgaag aactcctcct tggtgttgga tgaatcaaga
2251 attcgtctcc attccacgtt gctgttgcca atattgtttg gagagcgccc
2301 tcccagtcga agctctccaa atgttctagg gctcgtgtcc tccttggtga
2351 tatactcgaa tgctcgcttt ggggcgttga gtccgtcgat tcttgggtga
2401 atcgttcgac cgtctgggag tatgatgttg aaaaacaggt tcccatttac
2451 gtcgagtttc ttgtcacact ggataataca gtgtgtgtgg aatcctcctt
2501 caggttgttc ttcagtaggc tgatgatgtt ctagtgatac tgcaaggaat
2551 agaatcacat atgattctaa taaggtcttc agtttctcga atatataatc
2601 tttaaaatcc ccccctattt gggaatatgt tagaaaagca tttttctttt
2651 gaaaacgtaa ataaccgggt tggttagggg taggtctgtt tctgtttgga
2701 gcacgtggca tgtttgtttt tgtttccctc ttccgtacaa tgaatgaaaa
2751 gaaattgtat atatgagagg aagaggaact taagaggaat gaggaactga
2801 agagggaggt agagggataa ataggtaaac gcggataaga ttcc