Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate IR:Neg:B31K:Sug:08, complete genome.
ACC No: JQ707947
Dated: 2013-01-29 | Length: 2843 | CRC: -440979314
ID JQ707947; SV 1; circular; genomic DNA; STD; VRL; 2843 BP.
XX
AC JQ707947;
XX
DT 28-MAY-2012 (Rel. 112, Created)
DT 29-JAN-2013 (Rel. 115, Last updated, Version 3)
XX
DE Beet curly top Iran virus isolate IR:Neg:B31K:Sug:08, complete genome.
XX
KW .
XX
OS Beet curly top Iran virus
OC Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
XX
RN [1]
RP 1-2843
RX PUBMED; 23081676.
RA Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.;
RT "Fulfilling Koch's postulates for beet curly top Iran virus and proposal
RT for consideration of new genus in the family Geminiviridae";
RL Arch. Virol. 158(2):435-443(2013).
XX
RN [2]
RP 1-2843
RA Heydarnejad J., Varsani A.;
RT "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique
RT geminivirus with a mastrevirus-like replication associated protein and
RT curtovirus-like capsid protein";
RL Unpublished.
XX
RN [3]
RP 1-2843
RA Heydarnejad J., Varsani A.;
RT ;
RL Submitted (25-FEB-2012) to the INSDC.
RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave,
RL Kerman 7616914111, Iran
XX
FH Key Location/Qualifiers
FH
FT source 1. .2843
FT /organism="Beet curly top Iran virus"
FT /host="Beta vulgaris"
FT /isolate="IR:Neg:B31K:Sug:08"
FT /mol_type="genomic DNA"
FT /country="Iran:Negar, Kerman"
FT /collected_by="J. Heydarnejad"
FT /collection_date="2008"
FT /clone="B31K"
FT /db_xref="taxon:391228"
FT gene 164. .433
FT /gene="V3"
FT CDS 164. .433
FT /codon_start=1
FT /gene="V3"
FT /product="ss-ds DNA regulator"
FT /db_xref="InterPro:IPR009997"
FT /db_xref="UniProtKB/TrEMBL:I3QQA7"
FT /protein_id="AFK14072.1"
FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKISSLASRF
FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA"
FT gene 240. .605
FT /gene="V2"
FT CDS 240. .605
FT /codon_start=1
FT /gene="V2"
FT /product="movement protein"
FT /db_xref="InterPro:IPR009931"
FT /db_xref="UniProtKB/TrEMBL:I3QQA8"
FT /protein_id="AFK14073.1"
FT /translation="MVPFRVSEFPRRYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL
FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD
FT RWEDSFEEIPMEETGAK"
FT gene 484. .1236
FT /gene="V1"
FT CDS 484. .1236
FT /codon_start=1
FT /gene="V1"
FT /product="capsid protein"
FT /db_xref="GOA:I3QQA9"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="UniProtKB/TrEMBL:I3QQA9"
FT /protein_id="AFK14074.1"
FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK
FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA
FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK
FT KWQTHLMSTGTDYGGKQTYKASSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA
FT ILYVVVNDNTDNTNMYATLFGNCRAYFY"
FT gene complement(1482. .1787)
FT /gene="C2"
FT CDS complement(1482. .1787)
FT /codon_start=1
FT /gene="C2"
FT /product="hypothetical RepB"
FT /db_xref="UniProtKB/TrEMBL:I3QQB5"
FT /protein_id="AFK14075.1"
FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS"
FT gene complement(1802. .2710)
FT /gene="C1"
FT CDS complement(1802. .2710)
FT /codon_start=1
FT /gene="C1"
FT /product="hypothetical RepA"
FT /db_xref="GOA:I3QQ71"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:I3QQ71"
FT /protein_id="AFK14076.1"
FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI
FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEE
FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLACSEDTNVLNLSRSQTTDQS
FT DQEVSTYADHPEQERPSGQDL"
XX
SQ Sequence 2843 BP; 808 A; 491 C; 663 G; 881 T; 0 other;
jq707947 Length: 2843 29-JAN-2013 Type: N Check: 4022 ..
1 ccgcgtttac ctttccacgt ggcgtatgct gagtgggcgg acggttgagt
51 ggggaacacg ctttacttta aattaaagta aagtagcact aagtgggccc
101 cacattttat ttctttaaag actttctttt taagtcttct agatgcgtat
151 attatacgta taaatgatgg tctgtattcc cgactggtta tttctacttt
201 tcgtatttag tacgattctt cagtcgggaa ttaatttcta tggtaccttt
251 cagagtgagc gaatttccgc gaagatatcc agccttgcta gccgtttcga
301 cgagctgttt cttgcgttac aacaagtggt gtttgctcgg aatcgagcct
351 caagttcgcg agccgttgac tctagaggaa ggcgaggact ttcttcaatt
401 ccagaaggaa gtgaagaaat tgctgaagct taaggttagt tttaagcgta
451 agtgttgttt gtacgaggac atatacaaga agtatggcgg ttcagagtca
501 aaagagaaag tatactcctc cggccagttg gacgaggaag aggaagacga
551 ccggtgggag gacagtttcg aagaaatacc aatggaagag accggtgcga
601 agtaaccggg ctgtgaagtt gaagatgtat gacgacatgt taggtgcatc
651 tggagttgga tctaccatca gtaatgatgg gatgatcact atgttgaaca
701 actatgttca aggaattggt gatagccaga ggtcaaacaa cttgaccgtt
751 acgaggcatt tgaagtttga tatgtctctt atggctagtg gtgcattttg
801 ggcgagtcct aactatatga ctcaatatca ttgggttatt gtggatcgtg
851 atgttggttc tacgtttccg actcagttga gtactatctt tgatattccg
901 actggtggtc aggctatgcc ttccacctat cggattagga gggatgcgaa
951 tgaacgattt atcgtgaaga agaagtggca gactcatctg atgtctactg
1001 gtactgatta tggaggaaag cagacctata aggcgtcttc aatgccgaat
1051 tataagaaag ctatgaacat taatattcgg aatatcaatg tcaagacatt
1101 gtggaaggac actggaggtg gcaaatatga agatgtgaag gagaatgcta
1151 ttctttacgt agtggttaat gataatactg ataatacaaa tatgtatgct
1201 actttgtttg gtaattgtag ggcttatttc tattgattat tagaaatgcc
1251 caatgatgtt gaagttgaat aaaaaattta ttattaaatt tgtttgtgta
1301 agattgaaat gtagatatgt aaatatctag tataattgcc ttggaaaaca
1351 aaaaacgaaa aaatgattgc cggaaaacga aaaaaaaacc cctcagaaat
1401 tagatccccg aaaaagcaat atttttatat taatctgcag cccatccacg
1451 aagtggatgt tacatatttc gaagaaataa cttaactata ccaaacttca
1501 tcacttgcta agtaatatac atcgcaatta gcgtaaaacc aatctttcat
1551 agattcactc atacaaggta tccagtccat atctggatta gtaatagcaa
1601 tacaaggtct tccgcctgga atgactaagt ttggtttatg ttttatccaa
1651 acactataat cttcgttaca tccgataata gatttaaaca actcctgttg
1701 tattttttga tagcggatat cgtctattat atggtatgta gtgtggtcta
1751 tatcgtatag agaccaatct aataccatgc cagacatata gtggtgtcgg
1801 cctagagatc ttgcccactg ggtctttcct gttctggatg gtccgcatat
1851 gtagagactt cttggtcgga ctggtctgtt gtctggctcc tggacaaatt
1901 aagtacgtta gtgtcttcac tacatgctag atcgcgacta agtcgatcta
1951 ggtggaagta ttcttcaaga gtcatttgtc tgtcttgaag aattgctccc
2001 ctgcaattct cacatatttc gtaatgtaaa caatctgaac ttacgaaata
2051 tatattttgt tccgcccact ctttgatagt gtcaggtagc ctagagaact
2101 ccgtccatct gggtgtgtaa ggttgcacaa ctggcctgaa atgatagttg
2151 gcgaaggata aaatggaagg ccatctgaga acgaaatctg ttgggcagga
2201 ctctcgtatg ttactgaaga actcctcctt ggtgttggat gaatcaagaa
2251 ttcgtctcca ttccacgttg ctgttgccaa tactgtttgg agagcgccct
2301 cccagtcgaa gctctccaaa tgttctaggg ctcgtgtcct ccttggtgat
2351 atactcgaat gctcgctttg gggcgttgag tccgtcgatt cttgggtgaa
2401 tcgttcgacc gtctgggagt atgatgttga aaaacaggtt cccattgacg
2451 tcgagtttct tgtcacactg gataatacag tgtgtgtgga atcctccttc
2501 aggttgttct tcagtaggct gatgatgttc tagtgatact gcaaggaata
2551 gaatcacata tgattctaat aaggtcttca gtttctcgaa tatataatct
2601 ttaaaatccc cccctatttg ggaatatgtt agaaaagcat ttttcttttg
2651 aaaacgtaaa taaccgggtt ggttaggggt aggtctgttt ctgtttggag
2701 cacgtggcat gtttgttttt gtttccctct tccgtacaat gaatgaaaag
2751 aaattgtata tatgagagga agaggaactt aagaggaatg aggaactgaa
2801 gagggaggta gagggataaa taggtaaacg cggataagat tcc