Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate IR:Neg:B32P:Sug:08, complete genome.
ACC No: JQ707948
Dated: 2013-01-29 | Length: 2843 | CRC: 688017078
ID JQ707948; SV 1; circular; genomic DNA; STD; VRL; 2843 BP.
XX
AC JQ707948;
XX
DT 28-MAY-2012 (Rel. 112, Created)
DT 29-JAN-2013 (Rel. 115, Last updated, Version 3)
XX
DE Beet curly top Iran virus isolate IR:Neg:B32P:Sug:08, complete genome.
XX
KW .
XX
OS Beet curly top Iran virus
OC Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
XX
RN [1]
RP 1-2843
RX PUBMED; 23081676.
RA Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.;
RT "Fulfilling Koch's postulates for beet curly top Iran virus and proposal
RT for consideration of new genus in the family Geminiviridae";
RL Arch. Virol. 158(2):435-443(2013).
XX
RN [2]
RP 1-2843
RA Heydarnejad J., Varsani A.;
RT "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique
RT geminivirus with a mastrevirus-like replication associated protein and
RT curtovirus-like capsid protein";
RL Unpublished.
XX
RN [3]
RP 1-2843
RA Heydarnejad J., Varsani A.;
RT ;
RL Submitted (25-FEB-2012) to the INSDC.
RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave,
RL Kerman 7616914111, Iran
XX
FH Key Location/Qualifiers
FH
FT source 1. .2843
FT /organism="Beet curly top Iran virus"
FT /host="Beta vulgaris"
FT /isolate="IR:Neg:B32P:Sug:08"
FT /mol_type="genomic DNA"
FT /country="Iran:Negar, Kerman"
FT /collected_by="J. Heydarnejad"
FT /collection_date="2008"
FT /clone="B32P"
FT /db_xref="taxon:391228"
FT gene 166. .435
FT /gene="V3"
FT CDS 166. .435
FT /codon_start=1
FT /gene="V3"
FT /product="ss-ds DNA regulator"
FT /db_xref="InterPro:IPR009997"
FT /db_xref="UniProtKB/TrEMBL:I3QQ92"
FT /protein_id="AFK14077.1"
FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF
FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA"
FT gene 242. .607
FT /gene="V2"
FT CDS 242. .607
FT /codon_start=1
FT /gene="V2"
FT /product="movement protein"
FT /db_xref="InterPro:IPR009931"
FT /db_xref="UniProtKB/TrEMBL:I3QQ93"
FT /protein_id="AFK14078.1"
FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL
FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD
FT RWEDSFEEIPMEETGSK"
FT gene 486. .1238
FT /gene="V1"
FT CDS 486. .1238
FT /codon_start=1
FT /gene="V1"
FT /product="capsid protein"
FT /db_xref="GOA:I3QQ89"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="UniProtKB/TrEMBL:I3QQ89"
FT /protein_id="AFK14079.1"
FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK
FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA
FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK
FT KWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA
FT ILYVVVNDNTDNTNMYATLFGNCRAYFY"
FT gene complement(1484. .1789)
FT /gene="C2"
FT CDS complement(1484. .1789)
FT /codon_start=1
FT /gene="C2"
FT /product="hypothetical RepB"
FT /db_xref="UniProtKB/TrEMBL:I3QQB5"
FT /protein_id="AFK14080.1"
FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS"
FT gene complement(1804. .2712)
FT /gene="C1"
FT CDS complement(1804. .2712)
FT /codon_start=1
FT /gene="C1"
FT /product="hypothetical RepA"
FT /db_xref="GOA:I3QQ71"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:I3QQ71"
FT /protein_id="AFK14081.1"
FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI
FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEE
FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLACSEDTNVLNLSRSQTTDQS
FT DQEVSTYADHPEQERPSGQDL"
XX
SQ Sequence 2843 BP; 807 A; 489 C; 664 G; 883 T; 0 other;
jq707948 Length: 2843 29-JAN-2013 Type: N Check: 9527 ..
1 ccccgcgttt acctttccac gtggcgtatg cagagtgggc ggacggttga
51 gtggggaaca cgctttactt taatttaaag taaagtagca ctaagtggga
101 cccacttttt atttctttaa agacttaatt attaagtctt ctagatgcgt
151 atattatacg tataaatgat ggtctgtatt cccgactggt tatttctact
201 tttcgtattt agtacgattc ttcagtcggg aattaatttc tatggtacct
251 ttcagagtga gcgaatttcc gcgaagctat ccagccttgc tagccgtttc
301 gacgagctgt ttcttgcgtt acaacaagtg gtgtttgctc ggaatcgagc
351 ctcaagttcg cgagccgttg actctagagg aaggcgagga ctttcttcaa
401 ttccagaagg aagtgaagaa attgctgaag cttaaggtta gttttaagcg
451 taagtgttgt ttgtacgagg acatatacaa gaagtatggc ggttcagagt
501 caaaagagaa agtatactcc tccggccagt tggacgagga agaggaagac
551 gaccggtggg aggacagttt cgaagaaata ccaatggaag agaccggttc
601 gaagtaaccg ggctgtgaag ttgaagatgt atgacgacat gttaggtgca
651 tctggagttg gatctaccat cagtaatgat gggatgatca ctatgttgaa
701 caactatgtt caaggaattg gtgatagcca gaggtcaaac aacttgaccg
751 ttacgaggca tttgaagttt gatatgtctc ttatggctag tggtgcattt
801 tgggcgagtc ctaactatat gactcaatat cattgggtta ttgtggatcg
851 tgatgttggt tctacgtttc cgactcagtt gagtactatc tttgatattc
901 cgactggtgg tcaggctatg ccttccactt atcggattag gagggatgcg
951 aatgaacgat ttatcgtgaa gaagaagtgg cagactcatt tgatgtctac
1001 tggtactgat tatggaggaa agcagaccta taaggcgcct tcaatgccta
1051 attataagaa agctatgaac attaatattc ggaatatcaa tgtgaagacc
1101 ttgtggaagg acactggagg tggcaaatat gaagatgtga aggagaatgc
1151 tattctttac gtagtggtta atgataatac tgataataca aatatgtatg
1201 ctactttgtt tggtaattgt agggcttatt tctattgatt attagaaatg
1251 cccaatgatg ttgaagttga ataaaaaatt tattattaaa tttgtttgtg
1301 taagattgaa atgtagatat gtaaatatct agtataattg ccttggaaaa
1351 caaaaaacga aaaaatgatt gccggaaaac gaaaaaaaaa ccactcagaa
1401 attagacccc cggaaaagca atatttttat attaatctgc agcccatcca
1451 cgaagtggat gttacatatt tcgaagaaat aacttaacta taccaaactt
1501 catcacttgc taagtaatat acatcgcaat tagcgtaaaa ccaatctttc
1551 atagattcac tcatacaagg tatccagtcc atatctggat tagtaatagc
1601 aatacaaggt cttccgcctg gaatgactaa gtttggttta tgttttatcc
1651 aaacactata atcttcgtta catccgataa tagatttaaa caactcctgt
1701 tgtatttttt gatagcggat atcgtctatt atatggtatg tagtgtggtc
1751 tatatcgtat agagaccaat ctaataccat gccagacata tagtggtgtc
1801 ggcctagaga tcttgcccac tgggtctttc ctgttctgga tggtccgcat
1851 atgtagagac ttcttggtcg gactggtctg ttgtctggct cctggacaaa
1901 ttaagtacgt tagtgtcttc actacatgct agatcgcgac taagtcgatc
1951 taggtggaag tattcttcaa gagtcatttg tctgtcttga agaattgctc
2001 ccctgcaatt ctcacatatt tcgtaatgta aacaatctga acttacgaaa
2051 tatatatttt gttccgccca ctctttgata gtgtcaggta gcctagagaa
2101 ctccgtccat ctgggtgtgt aaggttgcac aactggcctg aaatgatagt
2151 tggcgaagga tagtatggaa ggccatctga gaacgaaatc tgttgggcag
2201 gactctcgta tgttactgaa gaactcctcc ttggtgttgg atgaatcaag
2251 aattcgtctc cattccacgt tgctgttgcc aatactgttt ggagagcgcc
2301 ctcccagtcg aagctctcca aatgttctag ggctcgtgtc ctccttggtg
2351 atatactcga atgctcgctt tggggcgttg agtccgtcga ttcttgggtg
2401 aatcgttcga ccgtctggga gtatgatgtt gaaaaacagg ttcccattga
2451 cgtcgagttt cttgtcacac tggataatac agtgtgtgtg gaatcctcct
2501 tcaggttgtt cttcagtagg ctgatgatgt tctagtgata ctgcaaggaa
2551 tagaatcaca tatgattcta ataaggtctt cagtttctcg aatatataat
2601 ctttaaaatc cccccctatt tgggaatatg ttagaaaagc atttttcttt
2651 tgaaaacgta aataaccggg ttggttaggg gtaggtctgt ttctgtttgg
2701 agcacgtggc atgtttgttt ttgtttccct cttccgtaca atgaatgaaa
2751 agaaattgta tatatgagag gaagaggaac ttaagaggaa tgaggaactg
2801 aagagggagg tagagggata aataggtaaa cgcggataag att