Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus isolate ShanDong1-1 coat protein (AV1) gene, complete cds.

ACC No: JQ768337

Dated: 2012-06-13 | Length: 777 | CRC: -1511284235

                
ID   JQ768337; SV 1; linear; genomic DNA; STD; VRL; 777 BP.
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AC   JQ768337;
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DT   13-JUN-2012 (Rel. 113, Created)
DT   13-JUN-2012 (Rel. 113, Last updated, Version 1)
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DE   Tomato yellow leaf curl virus isolate ShanDong1-1 coat protein (AV1) gene,
DE   complete cds.
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KW   .
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OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-777
RA   Xue D.Q., Li J.F., Xu X.Y.;
RT   "Genetic diversity of tomato-infecting Tomato yellow leaf curl virus
RT   (TYLCV) isolates in China";
RL   Unpublished.
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RN   [2]
RP   1-777
RA   Xue D.Q., Li J.F., Xu X.Y.;
RT   ;
RL   Submitted (09-MAR-2012) to the INSDC.
RL   College of Horticulture, Northeast Agricultural University, No. 59, Mucai
RL   Road, Harbin, Hei Longjiang 150030, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="ShanDong1-1"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /collected_by="Xu Xiangyang"
FT                   /collection_date="20-Sep-2011"
FT                   /db_xref="taxon:10832"
FT   gene            1. .777
FT                   /gene="AV1"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AFL72085.1"
FT                   /translation="MSKRPGDIIIFTSVSKVRRGLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH
FT                   RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT                   EPSTATVKNDLRDRFQVMRKFHATVIGEPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT                   NHTENALLLYMACTHASNPVYATMKIRIYFYDSIPI"
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SQ   Sequence 777 BP; 231 A; 144 C; 182 G; 220 T; 0 other;

jq768337 Length: 777  13-JUN-2012  Type: N  Check: 2769  ..

       1  atgtcgaagc gaccaggcga tataatcatt ttcacgtccg tctcgaaggt
      51  tcgccgaggg ctgaacttcg acagcccata cagcagccgt gctgctgtcc
     101  ctattgtcca aggcacaaac aagcgacgat catggacgta caggcccatg
     151  taccggaagc ccagaatata cagaatgtat cgaagccctg atgttcctcg
     201  tggatgtgaa ggcccatgta aagtccagtc ttatgagcaa cgagatgata
     251  ttaagcatac tggtattgtt cgttgtgtta gtgatgttac tcgtggatct
     301  ggaattactc acagagtggg taagaggttc tgtgttaaat cgatatattt
     351  tttaggtaaa gtctggatgg atgaaaatat taagaagcag aatcacacta
     401  atcaggtcat gttcttcttg gttcgtgata gaaggcctta tggaaacagc
     451  ccaatggatt ttggacaggt ttttaatatg ttcgataatg agcccagtac
     501  cgcaaccgtg aagaatgatt tgcgggatag gtttcaagtg atgaggaaat
     551  ttcatgctac agttattggt gagccctctg gaatgaagga acaggcatta
     601  gttaagagat tttttagaat taacagtcat gtaacttata atcatcagga
     651  ggcagccaag tatgagaacc atactgaaaa cgccttgtta ttgtatatgg
     701  catgtacgca tgcctctaat ccagtgtatg caactatgaa aatacgcatc
     751  tatttctatg attcaatacc aatttaa