Sequence of DPV Konjac mosaic virus

Konjac mosaic virus isolate AP4 coat protein gene, partial cds.

ACC No: JQ773439

Dated: 2013-03-31 | Length: 849 | CRC: 2092252190

                
ID   JQ773439; SV 1; linear; genomic RNA; STD; VRL; 849 BP.
XX
AC   JQ773439;
XX
DT   31-MAR-2013 (Rel. 116, Created)
DT   31-MAR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Konjac mosaic virus isolate AP4 coat protein gene, partial cds.
XX
KW   .
XX
OS   Konjac mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-849
RA   Padmavathi M., Sreenivasulu P., Krishnaprasadji J., Babu Ratan P.;
RT   "Konjac mosaic virus Naturally Infecting Three Aroid Plant Species in
RT   Andhra Pradesh, India";
RL   Unpublished.
XX
RN   [2]
RP   1-849
RA   Padmavathi M., Sreenivasulu P., Krishnaprasadji J., Babu Ratan P.;
RT   ;
RL   Submitted (13-MAR-2012) to the INSDC.
RL   Department of Virology, Sri Venkateswara University, Tirupati, Andhra
RL   Pradesh 517502, India
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: NCBI, BIOEDIT, MEGA 5.0 v. 2011 & 2012
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .849
FT                   /organism="Konjac mosaic virus"
FT                   /host="Colocasia"
FT                   /isolate="AP4"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="2011"
FT                   /db_xref="taxon:322053"
FT   CDS             <1. .849
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AGB34173.1"
FT                   /translation="SGEEEKDGDKKLDAGQQPPTKDKEEEEKSDLNTEKDGNKQVQTHK
FT                   DRDIDMGTSGTITVLKYKILKSKLRFPMVRGRKIMNMNHLAQYNPEQTDLANTRATKNQ
FT                   FARWFDGVKGDYGLNDAEMDVMLNGLVVWCIENGTFPNINGLWTMMDGEEQIEYPIKPL
FT                   IDHASPTFRQIMAHFSDIAEAYIEKRNFDGKYMPRYGLLRNLNDFSLARYAFDFYEMTS
FT                   KTPNRAREAHLQMKAAALQSASTRMFGLDGKVTTKGEDTERHTAEDVTRNLHTLMGVRA
FT                   I"
XX
SQ   Sequence 849 BP; 295 A; 155 C; 217 G; 182 T; 0 other;

jq773439 Length: 849  31-MAR-2013  Type: N  Check: 5291  ..

       1  agtggagagg aagagaagga tggggataag aagttggacg ctgggcagca
      51  gccaccaacg aaagacaaag aagaagagga aaaatctgac ctcaacacag
     101  aaaaggatgg gaataaacaa gtgcaaacac acaaagacag ggatattgac
     151  atgggcacta gtggcacaat aactgtacta aagtataaga ttctcaaatc
     201  taagcttagg ttcccaatgg tgcgaggaag gaaaattatg aatatgaacc
     251  atcttgccca atacaatcca gagcaaacgg atttagcaaa cacgagagca
     301  acaaagaatc aatttgcccg ttggtttgat ggtgtcaaag gggattatgg
     351  attgaatgac gcagagatgg acgtcatgtt aaacggccta gtagtctggt
     401  gcattgagaa tggaaccttt ccaaacataa atggattgtg gactatgatg
     451  gatggtgagg agcaaattga atatccaatc aaaccattaa tagatcatgc
     501  gtcacccaca ttccgtcaaa ttatggcgca ttttagtgac attgccgagg
     551  cgtatataga gaagcgcaat tttgatggta agtatatgcc acggtacggt
     601  ctactcagaa acttgaacga cttcagtctt gcgagatatg catttgattt
     651  ctatgaaatg acatccaaga cacccaacag ggcaagagag gctcacttgc
     701  agatgaaagc agccgccctg caaagcgcaa gcacgcgcat gtttggttta
     751  gacgggaaag ttacaacaaa gggagaggac acagagagac atacagctga
     801  agatgtgacg cgcaatttgc acactttaat gggtgtgcgc gctatttag