Sequence of DPV Potato virus Y

Potato virus Y strain GPost*2010 isolate Gpost capsid protein gene, partial cds.

ACC No: JQ954379

Dated: 2012-08-05 | Length: 801 | CRC: 307297086

                
ID   JQ954379; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
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AC   JQ954379;
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DT   05-AUG-2012 (Rel. 113, Created)
DT   05-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Potato virus Y strain GPost*2010 isolate Gpost capsid protein gene, partial
DE   cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-801
RX   PUBMED; 22837421.
RA   Cuevas J., Delaunay A., Rupar M., Jacquot E., Elena S.F.;
RT   "Molecular evolution and phylogeography of Potato virus Y based on the CP
RT   gene";
RL   J. Gen. Virol. 0:0-0(2012).
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RN   [2]
RP   1-801
RA   Delaunay A., Jacquot E.;
RT   ;
RL   Submitted (19-APR-2012) to the INSDC.
RL   UMR INRA-CIRAD-Montpellier SupAgro BGPI, INRA, Cirad TA A-54K, Campus
RL   international de Baillarguet, Montpellier cedex 5 34398, France
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /strain="GPost*2010"
FT                   /isolate="Gpost"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /collected_by="Dirk Bellstedt"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /protein_id="AFO84404.1"
FT                   /translation="GNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYRLVCNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGISTQEENTERHTPEDVSPSMHTLLGVKNM"
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SQ   Sequence 801 BP; 274 A; 163 C; 188 G; 176 T; 0 other;

jq954379 Length: 801  05-AUG-2012  Type: N  Check: 4192  ..

       1  ggaaatgaca caatcgatgc aggaggaagc actaagaagg atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaggaaaag gaaaaggacg
     101  tgaatgttgg aacatctgga actcatactg tgccacgaat taaagctatc
     151  acgtccaaaa tgagaatgcc caagagtaaa ggtgcaactg tactaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgacatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcggt acaacttgca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa catcaacgga gtttgggtta
     401  tgatggatgg agatgaacaa gtcgaatacc cactgaaacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccccgat
     551  atcgtttagt ttgtaatttg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aggtcacatc acgaacaccc gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaatct cgactttttg
     701  ggttggacgg cggcatcagt acacaagagg agaacacaga gaggcacacc
     751  cccgaggatg tctctccaag tatgcatact ctacttggag ttaagaacat
     801  g