Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus strain South Korea:Chungnam:Buyeo:Tomato(F2):2012 coat protein (AV1) gene, complete cds.

ACC No: JX075188

Dated: 2012-08-13 | Length: 777 | CRC: -1848729302

                
ID   JX075188; SV 1; linear; genomic DNA; STD; VRL; 777 BP.
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AC   JX075188;
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DT   13-AUG-2012 (Rel. 113, Created)
DT   13-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Tomato yellow leaf curl virus strain South
DE   Korea:Chungnam:Buyeo:Tomato(F2):2012 coat protein (AV1) gene, complete cds.
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KW   .
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OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-777
RA   Khan M.S., Ji S.H., Chun S.C., Raj S.K.;
RT   ;
RL   Submitted (17-MAY-2012) to the INSDC.
RL   Molecular Biotechnology, Konkuk University, 1 Hwayang-dong Kwangjin-gu,
RL   Seoul 143701, South Korea
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="tomato cv. Farmer Green House 2"
FT                   /strain="South Korea:Chungnam:Buyeo:Tomato(F2):2012"
FT                   /mol_type="genomic DNA"
FT                   /country="South Korea"
FT                   /collected_by="M.S. Khan"
FT                   /collection_date="21-Apr-2012"
FT                   /db_xref="taxon:10832"
FT   gene            1. .777
FT                   /gene="AV1"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="encapsidates viral nucleic acid"
FT                   /protein_id="AFP53920.1"
FT                   /translation="MSKAPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH
FT                   RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPIDFGQVFNMFDN
FT                   EPSTATVKNDLRDRFQVMRKFHVTVIGGPSGMKEQALFKRFFRINSHVTYNHQEAAKYE
FT                   NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN"
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SQ   Sequence 777 BP; 231 A; 149 C; 181 G; 216 T; 0 other;

jx075188 Length: 777  13-AUG-2012  Type: N  Check: 1273  ..

       1  atgtcgaaag cgccaggcga tataatcatt tccacgcccg tctcgaaggt
      51  tcgccgaagg ctgaacttcg acagcccata cagcagccgt gctgctgtcc
     101  ccattgtcca aggcacaaac aagcgacgat catggacgta caggcccatg
     151  taccggaagc ccagaatata cagaatgtat cgaagccctg atgttcctcg
     201  tggatgtgaa ggcccatgta aagtccagtc ttatgagcaa cgggatgata
     251  ttaagcatac tggtattgtt cgttgtgtta gtgatgttac tcgtggatct
     301  ggaattaccc acagagtggg taagaggttc tgtgttaaat cgatatattt
     351  tttaggtaaa gtctggatgg atgaaaatat taagaagcag aatcacacta
     401  atcaggtcat gttcttcttg gttcgtgata gaaggcccta tggaaacagc
     451  ccaattgatt ttggacaggt ttttaatatg ttcgataatg agcccagtac
     501  cgcaaccgtg aagaatgatt tgcgggatag gtttcaagtg atgaggaaat
     551  ttcatgttac agttattggt gggccctctg gaatgaagga acaggcatta
     601  tttaagagat tttttagaat taacagtcac gtaacttata atcatcagga
     651  ggcagccaag tatgagaacc atactgaaaa cgccttgtta ttgtatatgg
     701  catgtacgca tgcctctaat ccagtgtatg caactatgaa aatacgcatc
     751  tatttctacg attcaatatc aaattaa