Sequence of DPV Dolichos yellow mosaic virus
Dolichos yellow mosaic virus clone JD18, complete genome.
ACC No: JX315325
Dated: 2012-09-25 | Length: 2761 | CRC: -1906417194
ID JX315325; SV 1; circular; genomic DNA; STD; VRL; 2761 BP.
XX
AC JX315325;
XX
DT 25-SEP-2012 (Rel. 114, Created)
DT 25-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE Dolichos yellow mosaic virus clone JD18, complete genome.
XX
KW .
XX
OS Dolichos yellow mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2761
RA Jyothsna P., Malathi G.V.;
RT "First record of Luffa leaf distortion betasatellite association with
RT Dolichos yellow mosaic disease";
RL Unpublished.
XX
RN [2]
RP 1-2761
RA Jyothsna P., Malathi G.V.;
RT ;
RL Submitted (17-JUL-2012) to the INSDC.
RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute
RL (IARI), Pusa Campus, New Delhi, Delhi 110012, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2761
FT /organism="Dolichos yellow mosaic virus"
FT /host="Dolichos"
FT /mol_type="genomic DNA"
FT /country="India:Bihar, Samastipur, Aadharpur"
FT /collection_date="07-Dec-2011"
FT /identified_by="Jyothsna P"
FT /clone="JD18"
FT /db_xref="taxon:333968"
FT gene 123. .410
FT /gene="AV2"
FT CDS 123. .410
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AFS32145.1"
FT /translation="MWDPLVNDFPDTLHGLRCMLAVKFVQELLETYPRDSNGRILLEEL
FT IQVLRCKSYAKAQFRYGVFFSKAHNTSKGNLRRSVRNTDDSSSNSEQQSS"
FT gene 283. .1056
FT /gene="AV1"
FT CDS 283. .1056
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFS32144.1"
FT /translation="MPKRNFDMAFSSPRPTTRRRVTLDVPSATQMTVRRTPSSNRRKSW
FT QNRPMYRKPRLYRLYRSRDVPYGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNNLTH
FT RVGKRFCVKSVYIMGKIWMDENIKTKNHTNTVMFWLVRDRRPFGTPMDLGQVFNMYDNE
FT PSTATIKNDLRDRYQVLRKFDSTVTGGQYASREANIIKRFWRVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN"
FT gene complement(1073. .1483)
FT /gene="AC3"
FT CDS complement(1073. .1483)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AFS32147.1"
FT /translation="MTDSRTGESITAAQLQNGVFIWELKNPLSFKILEHHEGFLFDPNQ
FT HRTKIRIMFNHGLKKALGIHKAFLDFVIYHRLTPHSGRILNVFRNFLFRFLNNLGIISV
FT NNVLRGCEYVLYDVFQRVEAVDFEYNVQWKLY"
FT gene complement(1203. .1631)
FT /gene="AC2"
FT CDS complement(1203. .1631)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AFS32143.1"
FT /translation="MRSSSPSNSHCSLPSIKVQHRQAKKRKTIRRKRIDLTCGCSYYLN
FT INCRNDGFTHRGIHHCSSTTEWRVYLGAKESPVFQNPGASRGVPVRSEPTQNQDPHNVQ
FT PRVEESVGDTQGIFGLCDLPSIDSAFWADLECIQELPV"
FT gene complement(1537. .2634)
FT /gene="AC1"
FT CDS complement(1537. .2634)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiation protein"
FT /protein_id="AFS32146.1"
FT /translation="MRTPGFRISARNIFLTYPKCSLSKEEALDQLCRIECPSDKLFIRV
FT AQEAHQDGTMHLHALVQFKGKAQFRNARHFDLTHPHSTQIFHGNVQGAKSSSDVKSYIT
FT KDGDYVDWGTFQIDGRSARGGRQTADDAVASALNSGTVQGALSIIKELLPHNYVFQYHN
FT LRCNLERIFAPPISVYTSYYKPSDFSQVPSVMTDWAENNVVDPSWRSDPAARPRRPISI
FT VVEGATRTGKTLWARSLGAHNYMCGHLDLSPKIFSNDAWYNVIDDVDPHYLKHFKEFMG
FT AQMDWQSNIKYGKPTQIKGGIPTIFLCNPGPRSSYKEFLDEEQNESLKEWAYKNAIFIT
FT LEQPLFSTEHQGTASTSEEAQNDSA"
FT gene complement(2235. .2480)
FT /gene="AC4"
FT CDS complement(2235. .2480)
FT /codon_start=1
FT /gene="AC4"
FT /product="PTGS suppressor"
FT /protein_id="AFS32148.1"
FT /translation="MGLCISMPSSSSRVRPSSEMQDISTLPILIAHRFSMEMSREQRAH
FT LMSNPTSPRTVTTSTGEHFRSTDDLLEEVVRQLTML"
XX
SQ Sequence 2761 BP; 743 A; 613 C; 612 G; 793 T; 0 other;
jx315325 Length: 2761 25-SEP-2012 Type: N Check: 1381 ..
1 accggatggc cgcccgcccg ccacgtgtct taatcctgac gctccgtgga
51 gtcttattta gcgctttcac atttcaaatt tcactataaa acttgcgctc
101 gaagtcttgc gcaactatct aaatgtggga cccattggtc aatgattttc
151 ctgacacact gcatggattg cggtgtatgt tggctgtgaa atttgtgcag
201 gaattattgg agacctatcc gcgtgactct aatgggcgca tcctattgga
251 ggaactaatc caggtgttgc gttgtaagag ttatgccaaa gcgcaatttc
301 gatatggcgt tttcttctcc aaggcccaca acacgtcgaa gggtaacctt
351 agacgttccg tccgcaacac agatgacagt tcgtcgaact ccgagcagca
401 atcgtcgtaa atcatggcag aatcgcccca tgtaccgcaa accgcggtta
451 tatcgtttat atcgctctcg cgatgtacca tatggctgcg agggtccttg
501 taaggtccaa tcatttgaac aaagacatga cgttagtcat actggtaagg
551 tcatgtgtat ttccgatgtt actagaggaa ataatctaac tcatcgtgtt
601 ggtaaacgat tttgtgtgaa atctgtttac attatgggca agatctggat
651 ggacgagaac atcaagacta aaaaccatac aaataccgtc atgttttggt
701 tagtccgtga tcgacgacct tttggaacgc caatggattt aggtcaagtt
751 ttcaacatgt atgataatga accctcgacc gccacaatca aaaacgatct
801 acgcgatcgt taccaagtct tacgcaagtt cgattcaact gttaccggag
851 gtcaatatgc gtcgagggaa gcaaatataa tcaagagatt ttggcgtgtc
901 aacaactatg tggtatacaa ccaccaagaa gctgctaagt atgagaatca
951 tacagaaaat gcattattat tgtacatggc atgtactcat gcctcaaatc
1001 ctgtgtatgc aacattaaag atcaggatct atttctatga ttcgatctca
1051 aattaataaa acgatacttt tattaatata acttccattg tacattatat
1101 tcgaaatcaa ctgcttcgac tctttgaaat acatcataca acacatattc
1151 gcaaccgcgt aatacattgt tcactgaaat aattcctaaa ttatttagaa
1201 atctaaacag gaagttcctg aatacattca agatccgccc agaatgcgga
1251 gtcaatcgat ggtaaatcac aaagtccaaa aatgccttgt gtatccccaa
1301 cgctttcttc aacccgtggt tgaacattat gcggatcttg gttctgtgtt
1351 ggttcggatc gaacaggaac ccctcgtgat gctccaggat tttgaaagac
1401 aggggattct ttagctccca aataaacacg ccattctgta gttgagctgc
1451 agtgatggat tcccctgtgc gtgaatccgt catttcggca gttgatattc
1501 aggtaatacg aacagccaca cgtcagatcg attcgcttac gccgaatcgt
1551 tttgcgcttc ttcgcttgtc gatgctgtac cttgatgctc ggtagagaac
1601 aatggctgtt cgagggtgat gaagatcgca tttttgtaag cccactcctt
1651 caatgattcg ttctgttcct cgtcaaggaa ctctttatag gacgaacgtg
1701 gtcctggatt gcagagaaag atggtgggta ttccaccttt aatttgagtg
1751 ggcttaccgt atttgatatt gctttgccag tccatctggg cccccataaa
1801 ctctttaaaa tgctttaaat aatggggatc aacgtcatca atgacgttat
1851 accaagcatc gttcgaaaat atctttggac taagatccag atgtccacac
1901 atgtaattat gggcccctaa tgaccgggcc cacaatgtct tccctgttct
1951 cgttgctcct tcaacgacga tgcttatcgg tctcctcggc cgcgcagcgg
2001 gatcgctcct ccaagacgga tcaacaacgt tattttctgc ccagtctgtc
2051 ataacagacg gcacttgact aaagtcgctt ggcttgtaat acgaggtgta
2101 aactgaaatt ggaggagcga atatacgttc aaggttacat ctcagattgt
2151 ggtactggaa cacataattg tgtggaagta attctttaat aatgctcaga
2201 gcaccttgaa ccgtaccgga attcaacgcc gatgctacag catcgtcagc
2251 tgtctgacga cctcctctag cagatcgtcc gtcgatctga aatgttcccc
2301 agtcgacgta gtcaccgtcc ttggtgatgt aggatttgac atcagatgag
2351 ctctttgctc cctggacatt tccatggaaa atctgtgtgc tatgaggatg
2401 ggtaaggtcg aaatgtcttg catttcggaa ctgggcctta cccttgaact
2451 ggacgagggc atggagatgc atagtcccat cctggtgtgc ttcttgtgcg
2501 actctgatga acaatttgtc cgatggacac tcaatgcgac agagctgatc
2551 gagagcttct tctttagaga gcgagcattt gggataggtc agaaatatat
2601 ttctggcaga tatgcggaag cctggagttc tcattataaa aatgagatta
2651 atgccacgtc atcggtgtat cggtgtcgct tcaaagttcc cagaattggt
2701 gtcattggtg tcgcatatat aggggtctct aataaggggt acggccatcc
2751 gctataatat t