Sequence of DPV Ageratum enation virus
Ageratum enation virus isolate TC357, complete genome.
ACC No: JX436472
Dated: 2012-10-07 | Length: 2753 | CRC: 1757121189
ID JX436472; SV 1; circular; genomic DNA; STD; VRL; 2753 BP.
XX
AC JX436472;
XX
DT 07-OCT-2012 (Rel. 114, Created)
DT 07-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE Ageratum enation virus isolate TC357, complete genome.
XX
KW .
XX
OS Ageratum enation virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2753
RA Swarnalatha P., Jalali S., Krishna Reddy M.;
RT "Molecular characterization of Ageratum enation virus infecting tomato in
RT India";
RL Unpublished.
XX
RN [2]
RP 1-2753
RA Swarnalatha P., Jalali S., Krishna Reddy M.;
RT ;
RL Submitted (27-JUL-2012) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessarghatta Lake Post, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2753
FT /organism="Ageratum enation virus"
FT /host="tomato"
FT /isolate="TC357"
FT /mol_type="genomic DNA"
FT /country="India:Pantnagar, Uttarkhand"
FT /isolation_source="infected leaf"
FT /collected_by="M. Krishna Reddy"
FT /collection_date="18-Jan-2012"
FT /db_xref="taxon:188333"
FT gene 138. .494
FT /gene="AV2"
FT CDS 138. .494
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AFU34380.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGQQAHEQ
FT KAQDVQDVQKSRCP"
FT gene 298. .1068
FT /gene="AV1"
FT CDS 298. .1068
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFU34381.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1065. .1469)
FT /gene="AC3"
FT CDS complement(1065. .1469)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AFU34384.1"
FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHQNRPFLMKEDI
FT ITVQIQFNYNLRKALGMHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN
FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY"
FT gene complement(1210. .1614)
FT /gene="AC2"
FT CDS complement(1210. .1614)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AFU34383.1"
FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA
FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRTPEPAISYERGHHHRPNTVQLQP
FT EESVGDAQMFSSLPNLDDFTASDWSFLKGL"
FT gene complement(1517. .2602)
FT /gene="AC1"
FT CDS complement(1517. .2602)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="AFU34382.1"
FT /translation="MAPPKRFQIYAKNFFLTYLKCSLTKEEALSQIQNLQTPVNKKYIK
FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSTDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIFQYH
FT NLNANLDRIFSPPLEVYVSPFLSSSFDQVPEELEEWVSENVMAAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL
FT YSGSNQSAAQASQEGDEASTC"
FT gene complement(2188. .2445)
FT /gene="AC4"
FT CDS complement(2188. .2445)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AFU34385.1"
FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQPDQHISIRTFRELNPA
FT PTSSPTSTRTETPSNGESSRSMEDLHEEVNRQLMMLLQKP"
XX
SQ Sequence 2753 BP; 756 A; 539 C; 610 G; 848 T; 0 other;
jx436472 Length: 2753 07-OCT-2012 Type: N Check: 3112 ..
1 accggatggc cgcgattttt ttaaagtggt ccccacaact gacaaagaca
51 tgtccaccaa tctaaatcgt cgctcaaagc ttaattgttt tgtggtccct
101 tatttatact tgctcaccaa gtagtgcact ccgcactatg tgggatccat
151 tggtaaacga gtttcccgaa accgttcacg gttttagatg tatgttagca
201 gttaaatatc tgcagttagt agagaagact tattctcctg atacattagg
251 gcacgattta attagggatt taatttcagt tattagggct agaaattatg
301 tcgaagcgac cagcagatat aatcatttcc acgcccgctt cgaaggtacg
351 ccgccgtctc aacttcgaca gcccatatgt gagccgtgct gctgccccca
401 ttgtccgcgt caccaaagca agagcatggg ccaacaggcc catgaacaga
451 aagcccagga tgtacaggat gtacagaagt ccagatgtcc ctagaggatg
501 tgaaggccca tgtaaggtcc agtcgtttga gtccagacat gacattcagc
551 atataggtaa agtcatgtgt gtcagtgatg ttacgcgtgg aactgggctg
601 actcatcgag tgggtaaaag gttttgtgtt aaatccgttt atgtcttggg
651 taagatatgg atggacgaga atattaagac caaaaatcac acgaacagtg
701 tgatgttttt tttagttagg gatcgtagac ctgtggataa acctcaagat
751 tttggtgagg tttttaacat gtttgataat gagcccagta cggctactgt
801 gaagaatgtt catcgtgata ggtatcaagt gcttcggaaa tggcatgcaa
851 ctgttacggg tggacaatat gcgtcaaagg aacaagctct tgtgaagaag
901 tttgttaggg ttaataatta tgttgtgtat aaccagcaag aagctggcaa
951 gtatgaaaat cattctgaga atgcgttaat gttgtatatg gcatgtactc
1001 atgcctctaa cccagtgtat gctactttga agatacggat ctatttctat
1051 gattccgtaa caaattaata aatattaaat tttattgaat atgattgttc
1101 tacatataca atgtgttcta atacatccca taaaacatga tcaactgatc
1151 tgattacatt attaatactg ataactccta aattatttaa atattttaaa
1201 acttgagtct taaagaccct taagaaacga ccagtctgag gctgtgaagt
1251 catccagatt cggtagacta gaaaacattt gtgcatcccc aacgctttcc
1301 tcaggttgta attgaactgt atttggacgg tgatgatgtc ctctttcata
1351 agaaatggcc ggttctggtg ttctgttatc ttgaaataca ggggattttg
1401 aatctcccag ataaacacgc cattctctgc ttgagctgca gtgatgagtt
1451 cccctgtgcg tgaatccatg gttgtggcag gctaatgcta tgaagtatga
1501 acacccacaa gggagatcaa cacgtcgacg cctcgtcccc ttcttggcta
1551 gcctgtgctg cactttgatt ggaacctgag tagagtgggc cttcgagggt
1601 gacgaagatc gcattcttta aagcccaatt tctgagtgca ttattcttct
1651 cttcatccaa gaactcttta taacttgaat taggtcctgg attgcagagg
1701 aagatagtgg gaattccgcc tttaatttga actggctttc cgtacttggt
1751 atttgattgc cagtcccttt gggcccccat gaattcctta aagtgcttta
1801 ggtagtgggg atctacgtca tcgatgacgt tataccacgc atcattgctg
1851 taaactttgg ggcttagatc taaatgaccg cataggtaat tatgaggccc
1901 taatgaccta gcccacatcg ttttacccgt acgactgtct ccctcaatta
1951 ctatactttg aggcctcaga ggccgcgcag cggcagccat gacattttct
2001 gagacccatt cttcaagttc ttcaggaact tgatcaaaag aagaagataa
2051 aaaaggcgaa acataaacct ccaacggagg actaaaaatc ctatctaaat
2101 tagcatttaa attatgatat tgaaaaataa atttttctgg gagtttctcc
2151 tttattatag ccattgcagc ctctttagag cctgcattta gggcttctgc
2201 agcagcatca ttagctgtct gttgacctcc tcgtgcagat cttccatcga
2251 tctggaactc tccccattcg agggtgtctc cgtccttgtc gatgtaggac
2301 ttgacgtcgg tgctggattt agctccctga atgttcggat ggaaatgtgc
2351 tgatctggtt ggggatacca ggtcgaagaa tctgttattt tggcatttgt
2401 attttccttc gaactggata agcacgtgaa gatgaggttc cccattttcg
2451 tgaagctctc tgcagatttt gatgtatttt ttgtttactg gggtttgtag
2501 gttttggatt tgggaaagtg cttcttcttt agtaagagag catttgagat
2551 aagtgagaaa gaaatttttg gcatatattt gaaatcgttt tggaggagcc
2601 attgacttgg tcaatcggta ctcagctcta gtcttatgtc aatcggtgat
2651 cagtactcaa tatatagtga gtaccgaatg gcattattcg taattctgaa
2701 aagaaattca aaattcaaat ttgaaatcca aaagcggcca tccgtataat
2751 att