Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate IR:Nesh:115:Bean:10, complete genome.
ACC No: JX458087
Dated: 2013-06-11 | Length: 2859 | CRC: -943927667
ID JX458087; SV 1; circular; genomic DNA; STD; VRL; 2859 BP.
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AC JX458087;
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DT 31-JAN-2013 (Rel. 115, Created)
DT 11-JUN-2013 (Rel. 117, Last updated, Version 2)
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DE Beet curly top Iran virus isolate IR:Nesh:115:Bean:10, complete genome.
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KW .
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OS Beet curly top Iran virus
OC Viruses; ssDNA viruses; Geminiviridae; Becurtovirus.
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RN [1]
RP 1-2859
RX DOI; 10.1007/s11262-013-0875-5.
RX PUBMED; 23329008.
RA Gharouni Kardani S., Heydarnejad J., Zakiaghl M., Mehrvar M., Kraberger S.,
RA Varsani A.;
RT "Diversity of Beet curly top Iran virus isolated from different hosts in
RT Iran";
RL Virus Genes 46(3):571-575(2013).
XX
RN [2]
RP 1-2859
RA Gharouni Kardani S., Heydarnejad J., Zaki Aghl M., Mehrvar M.;
RT ;
RL Submitted (05-AUG-2012) to the INSDC.
RL Plant Protection, Ferdowsi University of Mashhad, Azadi Square, Mashhad,
RL Khorasan Razavi 9177948978, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .2859
FT /organism="Beet curly top Iran virus"
FT /host="Phaseolus vulgaris"
FT /isolate="IR:Nesh:115:Bean:10"
FT /mol_type="genomic DNA"
FT /country="Iran:Neyshabour, Khorasan Razavi province"
FT /collected_by="Sara Gharouni Kardani"
FT /collection_date="03-Jul-2010"
FT /db_xref="taxon:391228"
FT gene 167. .433
FT /gene="V3"
FT CDS 167. .433
FT /codon_start=1
FT /gene="V3"
FT /product="ss-ds DNA regulator"
FT /db_xref="InterPro:IPR009997"
FT /db_xref="UniProtKB/TrEMBL:L7XB78"
FT /protein_id="AGD79175.1"
FT /translation="MMVCIPDWLFLIFVFSTILQAGINFYGTFQGERISTKLSSLISRF
FT DELFLALQQVVYTRCQSRSRATVSRGRRALSPIPEGREENTEP"
FT gene 243. .623
FT /gene="V2"
FT CDS 243. .623
FT /codon_start=1
FT /gene="V2"
FT /product="movement protein"
FT /db_xref="InterPro:IPR009931"
FT /db_xref="UniProtKB/TrEMBL:L7XA52"
FT /protein_id="AGD79176.1"
FT /translation="MGPFRVREFPRNYPALLAVSTSCFLRYNKWCILGVNQEVEPLCLE
FT EGELFLRYQKDVKKILSRRCSFKEKCELYDAVVKKYDEFYEKHGCYRTEAKVHEPDNLV
FT EEEEDQWEDSFEEISMEETGTK"
FT gene 505. .1257
FT /gene="V1"
FT CDS 505. .1257
FT /codon_start=1
FT /gene="V1"
FT /product="capsid protein"
FT /db_xref="GOA:L7XDF6"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="UniProtKB/TrEMBL:L7XDF6"
FT /protein_id="AGD79177.1"
FT /translation="MAVTGQKRKYMNPITWSKKKKTSGRTVSKKYQWKKPVRSNRSVKL
FT KMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMALMASSGF
FT WASPNYMTQYHWVIVDRDVGATFPTQLSTIFDIPSSGQAMPSTYRIRRDANERFIVKKK
FT WQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNVNIRNINVKTQWKDTGGGKYEDVKENAI
FT LYVVVNDNTDNTNMYATLFGPCRAYFYD"
FT gene complement(1500. .1805)
FT /gene="C2"
FT CDS complement(1500. .1805)
FT /codon_start=1
FT /gene="C2"
FT /product="putative RepB"
FT /db_xref="UniProtKB/TrEMBL:L7XAZ6"
FT /protein_id="AGD79178.1"
FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLANDEVWYS"
FT gene complement(1820. .2728)
FT /gene="C1"
FT CDS complement(1820. .2728)
FT /codon_start=1
FT /gene="C1"
FT /product="putative RepA"
FT /db_xref="GOA:L7X610"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:L7X610"
FT /protein_id="AGD79179.1"
FT /translation="MPRAPSRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCILQCDKRIDVNGNLFFNIILPDGRTI
FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEE
FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT VSTDCLHYEICQNCRGAIFQDKQMTLEEYYYLDRLSHDLACHEDTNVLNSSRSQTTDQY
FT DPEVSTYADHPEQERPNGPDL"
XX
SQ Sequence 2859 BP; 814 A; 499 C; 689 G; 857 T; 0 other;
jx458087 Length: 2859 11-JUN-2013 Type: N Check: 7911 ..
1 ccccgcgttt acctttccac gtggcgtatg cgtagtgggc ggacggttta
51 gtggggaaca cgctttactt taattgaaag taaagtagca ctaagtgggc
101 cccacagtta ttccatctga gacttaataa gtaagtcttt ctagaagcgt
151 ataacatacg ctataaatga tggtctgtat tcccgactgg ttatttctga
201 tcttcgtatt tagtacgatt ctacaggcgg gaattaattt ttatgggacc
251 tttcagggtg agagaatttc cacgaaatta tccagcctta ttagccgttt
301 cgacgagctg tttcttgcgc tacaacaagt ggtgtatact cggtgtcaat
351 caagaagtcg agccactgtg tctagaggaa ggcgagctct ttctccgata
401 ccagaaggac gtgaagaaaa tactgagccg taggtgcagt ttcaaggaga
451 agtgtgagtt atacgacgcc gttgttaaga aatacgacga gttctacgag
501 aagcatggct gttacaggac agaagcgaaa gtacatgaac ccgataacct
551 ggtcgaagaa gaagaagacc agtgggagga cagtttcgaa gaaatatcaa
601 tggaagaaac cggtacgaag taataggtct gttaaattga agatgtatga
651 tgatatgctg ggtgcatctg gagtagggtc taccatcagc aatgatggta
701 tgatcaccat gttgaacaat tatgttcaag ggattggtga tagtcagcgg
751 tcaaacaatt tgactgttac taggcacttg aagtttgata tggcgcttat
801 ggctagttct ggtttttggg cgagtcctaa ttatatgact caatatcatt
851 gggttattgt ggaccgtgat gttggtgcga cgtttccgac tcagttgagt
901 actatttttg atattccgtc tagtggtcag gctatgcctt ccacttatcg
951 gattaggagg gatgcgaatg aacgatttat cgtgaagaag aagtggcaga
1001 cacatttgat gtctactggt actgattatg gaggaaagca gacctacaag
1051 gcgccttcga tgcctaatta caagaaggct atgaacgtca atattcggaa
1101 tatcaatgtc aagacacaat ggaaggacac tggaggtggc aagtatgaag
1151 atgtgaagga gaatgctata ctctacgtag tggttaatga taatactgat
1201 aatacaaaca tgtatgctac tttgttcggt ccttgcaggg cttatttcta
1251 tgattagtgg aaatactcaa tgatgttgat gttgattgta aaatttatta
1301 ataaatttgt ttttataata atggaatgga gatatgtaaa tatctagtat
1351 acatgccttg gaaaacaaaa aaacgaaaaa aagataaccg gaaaacgaca
1401 aaacaccttt actaaattag acccccgaaa aaaggattat attatatata
1451 tattgtcttc catccacgaa gtggatgtta catatttcgt agaaatacat
1501 tatgaatacc aaacttcgtc atttgctaag tagtagacat cgcaattagc
1551 gtagaaccaa tctttcatag attcactcat acatggtatc cagtccatat
1601 ctggattagt aatagcaata caaggtcttc cccctggtat gaccaagttt
1651 ggtttatgtt ttatccaaac actataatct tcgttacaac cgataataga
1701 tttaaacaac tcctgttgta ttttttgata acggatatcg tctattatat
1751 ggtatgtagt atggtctata tcgtataatg accaatctaa taccatgcca
1801 gacatatagt gatgcctgcc tagagatctg gcccattggg tctttcctgt
1851 tctggatggt ccgcatatgt agagacttct gggtcgtact ggtctgttgt
1901 ctggctcctg gaggaattaa gaacgttagt gtcttcatga catgctagat
1951 cgtgggagag acgatctagg taatagtatt cttctagagt catttgtttg
2001 tcttgaaaaa ttgctcccct gcaattttga cagatttcgt aatgtaaaca
2051 atctgtactt acgaaatata tattttgctc cgcccactct ttgattgtgt
2101 caggtagcct agagaactcc gtccatcggg gtgtgtaagg ttgcacaact
2151 ggcctgaaat gatagttggc gaaggaaaga atggaaggcc atctgagaac
2201 gaaatccgtc gggcaggact ctcgtatgtt actgaagaac tcctccttgg
2251 tgttggatga atcaagaatt cgtcgccatt ccacgttgct gttgccaata
2301 ctgtttggag agcgccctcc cagtcgaagc tctccaaatg ttctagggct
2351 cgtgtcctcc ttggtgatgt actcgaaagc acgcttcggg gcgttgagtc
2401 cgtcgattct tgggtgtatt gttcgaccgt ctgggagtat gatgttgaaa
2451 aacaagttcc cattgacgtc gattctcttg tcacactgga ggatacagtg
2501 tgtatggaac ccaccttcag gttgttcttc agttggctga tgatgctcta
2551 gtgagactgc gaggaagaga atcacatatg attcgagtag tgtcttgagt
2601 ttctcaaata tataatcttt gaaatcccca ccaatctggg aatatgtgag
2651 aaaagcattt tttttttgaa atcgtaaata accgggttgg tttggggtag
2701 gtctgtttct gcttggagca cgtggcatgg tgtttgggat ttccctcttc
2751 cgtacgattg atgaaaagaa attgtatatg ttagaggaag aggaacttgt
2801 gagggatgag gaagcgaaga gggaggaaga gggtttaata ggtaaacgcg
2851 gataagatt