Sequence of DPV Malvastrum yellow vein Yunnan virus
Malvastrum yellow vein Yunnan virus isolate SC224-3, complete genome.
ACC No: JX679249
Dated: 2012-11-18 | Length: 2747 | CRC: 1189973465
ID JX679249; SV 1; circular; genomic DNA; STD; VRL; 2747 BP.
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AC JX679249;
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DT 18-NOV-2012 (Rel. 114, Created)
DT 18-NOV-2012 (Rel. 114, Last updated, Version 1)
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DE Malvastrum yellow vein Yunnan virus isolate SC224-3, complete genome.
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KW .
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OS Malvastrum yellow vein Yunnan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2747
RA Jing Z., Tao R., Ling Q.;
RT ;
RL Submitted (11-SEP-2012) to the INSDC.
RL Plant Pathology, College of Plant Protection, 2 Tiansheng Road, Chongqing,
RL Chongqing 400716, China
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CC ##Assembly-Data-START##
CC Assembly Method :: virus v. 2011-02-24
CC Sequencing Technology :: Complete Genomics
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .2747
FT /organism="Malvastrum yellow vein Yunnan virus"
FT /host="Malva parviflora"
FT /isolate="SC224-3"
FT /mol_type="genomic DNA"
FT /country="China:Sichuan"
FT /db_xref="taxon:290030"
FT gene 131. .469
FT /gene="AV2"
FT CDS 131. .469
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="AFX60927.1"
FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIREL
FT ISILRSRNYVEASCRYRHFYSRVEGASPSELRQPLLNPCSCPHCPRHKISKLGEQAHES
FT QAQNVQDV"
FT gene 291. .1061
FT /gene="AV1"
FT CDS 291. .1061
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AFX60928.1"
FT /translation="MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWA
FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP
FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT gene complement(1058. .1462)
FT /gene="AC3"
FT CDS complement(1058. .1462)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AFX60931.1"
FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHVNRPFTMNMDI
FT ITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINS
FT IIRAVNHVLWKKIEQTMYVDMDSEIKFNIY"
FT gene complement(1155. .1607)
FT /gene="AC2"
FT CDS complement(1155. .1607)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AFX60930.1"
FT /translation="MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYYLSIN
FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQP
FT SESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN"
FT gene complement(1504. .2595)
FT /gene="AC1"
FT CDS complement(1504. .2595)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AFX60929.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSIKFIR
FT ICRELHKNGNPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYV
FT EKDGDILDHGIFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARPLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAIKNAIFVTLQGPL
FT YSGSNQSTAQGSEETQQEEESRS"
FT gene complement(2145. .2438)
FT /gene="AC4"
FT CDS complement(2145. .2438)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AFX60932.1"
FT /translation="MGILTCMFSSSSKGSSSVETIDSSTSHPQAGQHISIQTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVARLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2747 BP; 705 A; 558 C; 640 G; 844 T; 0 other;
jx679249 Length: 2747 18-NOV-2012 Type: N Check: 6335 ..
1 accggatggc cgcgcaattt tttatgggcc cccccactaa ctactgtctg
51 ccaatcacat gacgcgctca aagcttaaat aattctcccg cctattataa
101 gtacttcgtg cctaagtttc gctttgaaaa atgtgggatc cattattaaa
151 cgagttcccc gagacggttc acgggtttcg gtgcatgctt tcaatcaaat
201 atcttcagtt actctctgaa ggatactctc cagatacggt tggtttcgat
251 ctaatacgtg agttaatttc tattttgcgt tccaggaatt atgtcgaagc
301 gtcctgcaga tatcgtcatt tctactcccg ggtcgaaggt gcgtcgccgt
351 ctgaacttcg acagccctta ctcaacccgt gcagctgtcc ccactgtccg
401 cgtcacaaaa tctcgaagtt gggcgaacag gcccatgaat cgcaagccca
451 gaatgtacag gatgtataga agccctgatg tccctaaggg atgtgaaggc
501 ccatgtaagg tccaatcctt cgatgcgaag aacgatattg ggcatatggg
551 taaggtgatc tgtttgtctg acgttacccg tggtattgga cttacccatc
601 gagttggcaa acgtttctgt gtcaagtcac tttatttcgt tggcaagata
651 tggatggatg aaaatattaa ggttaagaat cacacgaaca ccgttttgtt
701 ctggatagtt agggatcgac gtcctactgg aacgccttat gattttcagc
751 aggtttttaa tgtgtatgat aatgagcctt ccacggcaac tgtgaaaaac
801 gaccagcgtg atcgtttcca ggttatcagg aggttccagg caacggtgac
851 cggtggacaa tatgcagcga aggagcaggc gattattaga aagttttatc
901 gtgttaataa ttatgtagtg tataatcacc aggaagctgg gaagtatgag
951 aaccatactg aaaatgcttt gttattgtat atggcatgta cccatgcctc
1001 taatcccgtg tatgctactt tgaaagtcag gagttatttc tatgactcag
1051 tgacgaatta ataaatatta aattttattt ctgaatccat gtctacatac
1101 atagtttgtt ctattttttt ccataataca tgatttacag ctctaataat
1151 tgagttaatt gaaattacac ctagattgtt tagatacttg aggacttggg
1201 ttttgaatac ccttaagaaa agaccaatct gagggtgtaa ggtcgtccag
1251 attcggtatg tcagaaaaca cttgtgcact cccagagctc tccgaaggtt
1301 gtagttgaat tggatcctta ttgttatgat gtccatgttc atcgtgaatg
1351 gacggttgac gtggttgagg atcttgaaat aaaggggatt tggaacttcc
1401 cagatatagg cgccactcca tgcttgagct gcagtgatgg gttcccctgt
1451 gcgtaaatcc atggttaaag cagttgattg acaaataata agaacacccg
1501 cattcaagat cgactctcct cctcctgttg cgtttcttcg cttccctgtg
1551 ctgtactttg attggaacct gagtacagtg gtccttggag ggtgacgaag
1601 atcgcattct tgatagccca gtttttgagt gcggtgttct tgtcctcgtc
1651 gaggaattct ttataactgc tgttgggacc aggattgcat aggaagattg
1701 tcggtattcc gcctttaatt tgaactggct tcccgtactt tgtgttggat
1751 tgccagtccc tttgggcccc catgaactct ttaaagtgct tgaggaagtg
1801 cgggtcgacg tcatcaatga tgttatacca agcatcattg ctgtacactt
1851 tgggacttaa gtctagatgg ccacacaaat agttgtgtgg gcctagcggc
1901 ctagcccaca tcgtcttccc ggtccgacta tctccctcga tgactatact
1951 ttgaggtcta aggggccgcg cagcggcatc gacaacattc tcgcacgccc
2001 actcttcaag ttcttctgga acttgatcaa atgaagaaga agaaaaagga
2051 gaaacataag gagctggtgg ctcttgaaaa tacctatcta aatttgaatt
2101 taaattatga aattgaagta gaaagtctct tggggctttc tccttcaata
2151 tattgagggc ctgagctttg gaccctgcgt tgattgcctc ggcatatgcg
2201 tcgttggcag tctggcaacc tcctctagct gatcttccat cgacttggaa
2251 aattccatga tcaaggatgt ctccgtcttt ctccacgtag gttttgacat
2301 cgcttgagct tttagctccc tgaatgtttg gatggaaatg tgctgacctg
2351 cttggggatg tgaggtcgaa gaatctattg tttctacact ggaacttccc
2401 ttcgaactgg atgagaacat gcaggtgagg attcccattt ttatgaagct
2451 ctctgcagat tctaatgaat tttatggaag ttggggtttg gagatttaat
2501 aattgggaaa gtgcctcttc ttttgtgagg gagcacttgg gataagtgag
2551 gaaataattt ttggcattta ttttaaaccg attgggggct gccatgttga
2601 ctaagtcaat cggtgtctct caatttgctc tatgtatcgg tgtattggag
2651 tcctatatat atggagaccc taatggcata attgtaataa aagaaaaata
2701 atttgatatt aaaacgaaaa ggctaaagcg gccatccgtc taatatt