Sequence of DPV Blechum interveinal chlorosis virus
Blechum interveinal chlorosis virus segment B, complete sequence.
ACC No: JX827488
Dated: 2012-10-31 | Length: 2640 | CRC: 1844071916
ID JX827488; SV 1; circular; genomic DNA; STD; VRL; 2640 BP.
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AC JX827488;
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DT 31-OCT-2012 (Rel. 114, Created)
DT 31-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Blechum interveinal chlorosis virus segment B, complete sequence.
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KW .
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OS Blechum interveinal chlorosis virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2640
RA Mauricio-Castillo J.A., Banuelos-Hernandez B., Patino-Rodriguez O.,
RA Salazar-Gonzalez J., Ambriz-Granados S., Arguello-Astorga G.R.;
RT "A new Geminivirus isolated from Blechum pyramidatum in Mexico";
RL Unpublished.
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RN [2]
RP 1-2640
RA Mauricio-Castillo J.A., Banuelos-Hernandez B., Patino-Rodriguez O.,
RA Salazar-Gonzalez J., Ambriz-Granados S., Arguello-Astorga G.R.;
RT ;
RL Submitted (15-SEP-2012) to the INSDC.
RL Unidad Academica de Agronomia, Universidad Autonoma de Zacatecas, Jardin
RL Juarez 147, Zacatecas 98000, Mexico
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CC GenBank Accession Numbers JX827487, JX827488 represent sequences
CC from the 2 segments of Blechum interveinal chlorosis virus.
CC ##Assembly-Data-START##
CC Assembly Method :: DNAstar v. laser gene
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .2640
FT /organism="Blechum interveinal chlorosis virus"
FT /segment="B"
FT /host="Blechum pyramidatum"
FT /isolate="Campeche"
FT /mol_type="genomic DNA"
FT /country="Mexico"
FT /collection_date="25-Nov-2011"
FT /db_xref="taxon:1246650"
FT gene 574. .1344
FT /gene="BV1"
FT CDS 574. .1344
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /note="nuclear transporter; nuclear import/export of viral
FT DNA; BR1; NSP"
FT /protein_id="AFV48346.1"
FT /translation="MYFTRYRRGGSLTHRRGYSRYTLYKRPFSVHRVDVKRRRTSSTKY
FT HDDAKMSQQRIHEDQFGPEFVLGHNTALSTFITFPSLVKNEPNRCRSYIKLKRLRFKGT
FT VKIERVIADINMDGPTQKIEGVFSMVIVVDRKPHLSPTGCLHTFDELFGARIHSHGNLA
FT IVPALKDRFYIRHIMKRVLSVEKDTLMVDLEGITYLSNRRFNCWSAFNDLDRESCNGVY
FT ANINKNALLVYYCWMSDALSKASTFVSFDLEYLG"
FT gene complement(1435. .2316)
FT /gene="BC1"
FT CDS complement(1435. .2316)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /note="plasmodesmata-associated protein; involved in virus
FT cell-to-cell movement; MP"
FT /protein_id="AFV48347.1"
FT /translation="MDSKLVVPPSVFNYVESHRDEYQLSHDLTEIILQFPSTAAQLTAR
FT LNRSCMKIDHCVIEYRQQVPINAAGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYKVCDSNVHQGTHFAKFKGKLKLSTAKHSVDIPFRAPTVRILS
FT KQFTDKDIDFHHVGYGKYERRMIKSTASARFGLHNPIELNPGETWATRSAVGITHSNVS
FT SDVANEIHPYREMNRIGTPMLDPGDSVSQIGIQRTQSNITMSMSQLNEIVRSTVQECIN
FT TNCIPSHPKQLK"
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SQ Sequence 2640 BP; 782 A; 438 C; 486 G; 934 T; 0 other;
jx827488 Length: 2640 31-OCT-2012 Type: N Check: 4016 ..
1 accggatggc cgcgttttcc cccctctcag gcccaccact ctctccaggg
51 ccgcccatca tttaaaagaa tattaggccc atttaaatgg gcctgatatt
101 ttgagcccat ctgagacctg tttttgttat cttttttaaa aggagggacc
151 acaataacac tatatttaac tttgtccatt tagaatgttt ctgacatgct
201 tagatattaa cgacgtaaac tttaaattgt ggtccacaat aataaaataa
251 ttttattatt gtcatgtaaa ctttaattca aaatttgtaa gcggagcgtc
301 gtaatacttt catagagggg accacttaga aaattggtct gatgaccaat
351 tttaaatatt gtatggccca catatgcatt ggttaacgta ttatattttg
401 agttacatca catattgcat aaaccaatga aatttcctct tcacagacta
451 gttaacatat atttcataca ttaattttct atttaaatat catattgatt
501 tcattggtta ccacgtctat atgcattagc ctcattttat tgtattttaa
551 tattaattag tatagtatta actatgtatt ttactagata tagacgtggt
601 ggatcgttaa cccatcgacg aggttattca cgttatacat tgtataaacg
651 acctttttct gttcatcgtg tggatgtgaa acgtcgacga accagttcta
701 ctaagtatca tgatgatgca aagatgtcac agcaacgtat acatgaggat
751 cagtttggtc ccgaatttgt tctgggtcat aatacagctt tgtctacatt
801 cattacattt cccagtcttg ttaagaatga acctaatcgt tgtagatcat
851 atattaagtt aaaacgttta cgtttcaaag gtaccgtgaa gattgaacgt
901 gtaattgctg atattaatat ggatggtcct actcaaaaga ttgaaggagt
951 cttctctatg gttattgttg ttgatcgtaa accacatctt agtccaactg
1001 gctgtctaca tacatttgat gagttatttg gtgctaggat tcatagccat
1051 ggtaatctag ccatcgttcc cgcattgaaa gaccgtttct acatacgtca
1101 tataatgaaa cgtgttttat ctgttgagaa ggatactttg atggtagact
1151 tggaaggaat tacatactta tctaataggc gttttaattg ttggtctgca
1201 tttaatgatc ttgatagaga atcatgcaat ggtgtttatg ctaatataaa
1251 taagaatgct ttattagtct attattgttg gatgtcagat gctttgtcta
1301 aagcatcaac ttttgtatca tttgatcttg aatatctcgg ttgaataata
1351 aaatattttt atattttatc agtaacttct ttttggtctc agatgaatgt
1401 ttattataac atagataaat atatgataat atatttattt taactgtttt
1451 ggatgtgagg gaatacaatt ggtgtttata cattcttgta ctgttgatct
1501 aactatttcg tttaactggg acatagacat tgtaatgttg gattgggttc
1551 tctgaattcc aatttgtgaa acagagtcac ctgggtctaa cattggcgtt
1601 cctattctgt tcatttctct atatggatgt atctcgtttg ccacatctga
1651 actgacattg gaatgtgtta tacctactgc actccttgta gcccaagttt
1701 cacctggatt taactctatt gggttatgaa gtccaaatct tgctgatgca
1751 gtagatttaa tcattcttct ttcatatttt ccatatccaa catggtgaaa
1801 atcaatatcc ttgtctgtaa actgttttga caaaattctc accgttggtg
1851 cacggaaagg gatatcaaca gaatgttttg ctgttgacag ttttaattta
1901 cccttgaatt ttgcaaaatg tgtaccttga tgaacatttg agtcacatac
1951 tttataatac agtttccatg gaattggatc cttgagtgag aaaaatgaag
2001 atgagaaata gtggagatct atgttacacc taattggaaa agtccacgac
2051 gcctgtaatg actcattgtc tgtcattctt ttatcatgaa tctccacgat
2101 tactgttcct gctgcgttaa taggaacctg ctgtcgatat tctataacgc
2151 aatgatctat cttcatacag ctacgattca gccttgcagt taattgagct
2201 gcagttgaag gaaattgcaa gatgatttct gtaaggtcat gagacagttg
2251 atactcatct cgatgagact ccacataatt aaaaacactt ggtggtacga
2301 ctaatttaga atccatatgg ccgcgcagcg ggatgcttaa ctgatattaa
2351 tagcgaaggg gactgtttaa cgggatactt aagactatca ggtggcttat
2401 taatttttta tataagaaga agaagggatt tgagatatac tctggagagt
2451 aatatcatat attgatctgt ttatatagca attaatttgt atggagtgag
2501 ggcaatttgg taaatattgg tgttccccca aatcagagct ctcataaaac
2551 tctagagaat tgggggaact gggggaaaat atatactaaa acctccttac
2601 caggatcttg caacacgtgg cggccatccg atataatatt