Sequence of DPV Cardamom bushy dwarf virus

Cardamom bushy dwarf virus clone Fr-CL-2 cell cycle link protein (CLINK) gene, complete cds.

ACC No: JX867549

Dated: 2013-03-10 | Length: 1028 | CRC: 2030379834

                
ID   JX867549; SV 1; circular; genomic DNA; STD; VRL; 1028 BP.
XX
AC   JX867549;
XX
DT   10-MAR-2013 (Rel. 116, Created)
DT   10-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Cardamom bushy dwarf virus clone Fr-CL-2 cell cycle link protein (CLINK)
DE   gene, complete cds.
XX
KW   .
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OS   Cardamom bushy dwarf virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1028
RA   Shilpi S., Mandal B.;
RT   "Molecular characterization of cardamom bushy dwarf virus";
RL   Unpublished.
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RN   [2]
RP   1-1028
RA   Shilpi S., Mandal B.;
RT   ;
RL   Submitted (25-SEP-2012) to the INSDC.
RL   Plant Virology Unit, Division of Plant Pathology, Indian Agricultural
RL   Research Institute, Pusa Campus, New Delhi, Delhi 110012, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1028
FT                   /organism="Cardamom bushy dwarf virus"
FT                   /host="large cardamom"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Kalimpong"
FT                   /isolation_source="infected leaves"
FT                   /collected_by="Bikash Mandal"
FT                   /collection_date="2010"
FT                   /clone="Fr-CL-2"
FT                   /db_xref="taxon:262588"
FT   gene            244. .726
FT                   /gene="CLINK"
FT   CDS             244. .726
FT                   /codon_start=1
FT                   /gene="CLINK"
FT                   /product="cell cycle link protein"
FT                   /protein_id="AGG38933.1"
FT                   /translation="MDRWEEDVYPDDVKRVIKEYYWRSRLNLLFCEKVKRQVRRILGFG
FT                   DFDDAMLAVKEMKTSIVALAAKMKKDSVVICEVTNKSVANRLNTMSFFYHEYVEDQGDT
FT                   YSVDVVLFCDEEVPSSSENDEENVIYRNVIMASKDEKISYESCIWIVIGDDGVTVL"
XX
SQ   Sequence 1028 BP; 318 A; 165 C; 267 G; 278 T; 0 other;

jx867549 Length: 1028  10-MAR-2013  Type: N  Check: 3112  ..

       1  agcgctgggg actattatta cccccagcgc ttgggacgga acacccacgt
      51  gcttaaatta aaagcacgtg ttgatggatg gcttcagaag taaggcaccg
     101  ttaacgtccg ttacggtaac ggcatattcg ttgcttagaa acgaaggaaa
     151  cgttagtaga tatttgttcg tggtgcgcgt aggataggct atttaaacct
     201  gtagggtttc gcctattcct gaatcactcg gaggtcgtgg aagatggatc
     251  gatgggaaga ggatgtctat cctgacgatg tgaagagagt gattaaggaa
     301  tactactgga gatcccggct taaccttctc ttctgtgaga aggtgaaacg
     351  tcaggtacga aggattctag ggtttggtga ttttgatgat gctatgcttg
     401  cagttaagga gatgaagact tcgatagttg cccttgcggc aaagatgaag
     451  aaggatagtg tggtaatatg cgaggtcaca aataaatcgg tggctaacag
     501  gttgaacacg atgtccttct tttatcatga gtatgtggag gatcaaggag
     551  acacatattc cgttgatgtg gttctattct gtgatgagga agtaccatca
     601  tcgtctgaga acgatgaaga aaacgttata tacaggaatg ttatcatggc
     651  atcgaaagat gagaagatct catatgagtc ttgtatatgg atagtcatcg
     701  gggacgatgg tgtaacagtc ctgtgatatg tattccagta ttaatacaaa
     751  tataatatta aataatggaa tggtgattta tgtaattaga ataatacgta
     801  aatggtatac ggtgtgcata aaaataaaaa acacacatca atacacgcta
     851  tgccgaaaag ctgaaaacgc aattaagacc tgtcggatta agcttattaa
     901  ccaaataagg gccgaaggcc cgtttaaatg tagagtgggc cttggcccac
     951  gaataccaat gaacgtaaga acattggtaa agttacttat ttggtgggcc
    1001  agatgtcccg atgacgtaag gatacgta