Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate Zarghan, complete genome.
ACC No: JX912248
Dated: 2012-12-23 | Length: 2842 | CRC: 1944300613
ID JX912248; SV 1; circular; genomic DNA; STD; VRL; 2842 BP.
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AC JX912248;
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DT 23-DEC-2012 (Rel. 115, Created)
DT 23-DEC-2012 (Rel. 115, Last updated, Version 1)
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DE Beet curly top Iran virus isolate Zarghan, complete genome.
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KW .
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OS Beet curly top Iran virus
OC Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
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RN [1]
RP 1-2842
RA Soleimani R., Behjatnia S.A.A., Izadpanah K.;
RT "The Complete Nucleotide Sequence of BCTIRV-[Zarghan]";
RL Unpublished.
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RN [2]
RP 1-2842
RA Soleimani R., Behjatnia S.A.A., Izadpanah K.;
RT ;
RL Submitted (05-OCT-2012) to the INSDC.
RL Plant Protection, Plant Virology Research Center, Road of Shiraz, Esfahan,
RL Shiraz, Fars 7144165186, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .2842
FT /organism="Beet curly top Iran virus"
FT /host="sugar beet"
FT /isolate="Zarghan"
FT /mol_type="genomic DNA"
FT /country="Iran"
FT /isolation_source="leaf"
FT /collection_date="2009"
FT /db_xref="taxon:391228"
FT gene 166. .435
FT /gene="V3"
FT CDS 166. .435
FT /codon_start=1
FT /gene="V3"
FT /product="movement protein"
FT /protein_id="AGA20366.1"
FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF
FT DELFLALQQVAFARNRASSSRAVDSRGRRGLSSVPEGSEEIAEA"
FT gene 242. .607
FT /gene="V2"
FT CDS 242. .607
FT /codon_start=1
FT /gene="V2"
FT /product="ss-ds DNA regulator"
FT /function="regulator of the relative levels of the ssDNA
FT and dsDNA"
FT /protein_id="AGA20365.1"
FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWRLLGIEPQVREPLTL
FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSKSEEKVYSSGQLDEEEEDD
FT RWEDSFEEIPMEETGAK"
FT gene 486. .1238
FT /gene="V1"
FT CDS 486. .1238
FT /codon_start=1
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="AGA20367.1"
FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK
FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA
FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK
FT KWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA
FT ILYVVVNDNTDNTNMYATLFGNCRAYFY"
FT gene complement(1484. .1789)
FT /gene="C2"
FT CDS complement(1484. .1789)
FT /codon_start=1
FT /gene="C2"
FT /product="Rep"
FT /protein_id="AGA20369.1"
FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS"
FT gene complement(1804. .2712)
FT /gene="C1"
FT CDS complement(1804. .2712)
FT /codon_start=1
FT /gene="C1"
FT /product="RepA"
FT /protein_id="AGA20368.1"
FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT TLLESYVILSLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI
FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEE
FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT VSSDCLNYEICENCRGAVLQDREMTLEEYFHLDRLSRDLACSEDTNVLNFSRSQTTDQS
FT DQEVSTYVDHPEQERPSGQDL"
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SQ Sequence 2842 BP; 807 A; 492 C; 666 G; 877 T; 0 other;
jx912248 Length: 2842 23-DEC-2012 Type: N Check: 980 ..
1 ccccgcgttt acctttccac gtggcgtatg cagagtgggc ggacggttga
51 gtggggaaca cgctttactt taatttaaag taaggtagca ctaagtggga
101 cccacatgtt atttctttaa agacttaatt attaagtctt ctagatgcgt
151 atattatacg tataaatgat ggtgtgtatt cccgactggt tatttctact
201 cttcgtattt agtacgattc ttcagtcggg aattaatttc tatggtacct
251 ttcagagtga gcgaatttcc gcgaagctat ccagccttgc tagccgtttc
301 gacgagctgt ttcttgcgtt acaacaagtg gcgtttgctc ggaatcgagc
351 ctcaagttcg cgagccgttg actctagagg aaggcgagga ctttcttcag
401 ttccagaagg aagtgaagaa attgctgaag cttaaggtta gttttaagcg
451 taagtgttgt ttgtacgagg atatatacaa gaagtatggc ggttcaaagt
501 cagaagagaa agtatactcc tccggccagt tggacgagga agaggaagac
551 gaccggtggg aggacagttt cgaagaaata ccaatggaag agaccggtgc
601 gaagtaaccg ggccgtgaag ttgaagatgt atgacgacat gttaggtgca
651 tctggagttg gatctaccat cagtaatgat gggatgatca ctatgttgaa
701 caactatgtt caaggaattg gtgatagcca gaggtcaaac aacttgaccg
751 ttacgaggca tttgaagttt gatatgtctc ttatggctag tggtgcattt
801 tgggcgagtc ctaactatat gactcaatat cattgggtta ttgtggatcg
851 tgatgttggt tctacgtttc cgactcagtt gagtactatc tttgatattc
901 cgactggtgg tcaggctatg ccttccactt atcggattag gagggatgcg
951 aatgaacgat ttatcgtgaa gaagaagtgg cagactcatt tgatgtctac
1001 tggtactgat tatggaggaa agcagaccta taaggcgcct tcgatgccta
1051 attataagaa agctatgaac atcaatattc ggaatatcaa tgtgaagaca
1101 ttgtggaagg acactggagg tggcaaatat gaagatgtga aggagaatgc
1151 tattctttac gtagtggtta atgataatac tgataataca aatatgtatg
1201 ctactttgtt tggtaattgt agggcttatt tctattgatt attagaaatg
1251 cccaatgatg ttgaagttga ataaaaaatt tattattaaa tttgtttgtg
1301 taagattgca atgtagatat gtaaatatct agtataattg ccttggaaaa
1351 caaaaaacga aaaaatgatt gccggaaaac gaaaaaaaaa cccctcagaa
1401 attagacccc cgaaaaatca atatatttat attaatctgc agcccatcca
1451 cgaagtggat gttacatatt tcgaagaaat agcttaacta taccaaactt
1501 catcacttgc taagtagtat acatcgcaat tagcgtaaaa ccaatctttc
1551 atagattcac tcatacaagg tatccagtcc atatctggat tagtaatagc
1601 aatacaaggt cttccgcctg gaatgactaa gtttggttta tgttttatcc
1651 aaacactata atcttcgtta catccgataa tagatttaaa caactcctgt
1701 tgtatttttt gatagcggat atcgtctatt atatggtatg tagtgtggtc
1751 tatatcgtat agagaccaat ctaataccat gccagacata tggtggtgtc
1801 ggcctagaga tcttgcccac tgggtctttc ctgttctgga tggtccacat
1851 atgtagagac ttcttggtcg gactggtctg ttgtctggct cctggagaaa
1901 ttaagtacgt tagtgtcttc actacatgct agatcgcgac taagtcgatc
1951 taggtggaag tattcttcaa gagtcatttc tctgtcttga agaactgctc
2001 ccctgcaatt ctcacatatt tcgtaattta aacaatctga acttacgaaa
2051 tatatatttt gttccgccca ctctttgatt gtgtcaggta gcctagagaa
2101 ctccgtccat ctgggtgtgt aaggttgcac aactggcctg aaatgatagt
2151 tggcgaagga tagaatggaa ggccatctga gaacgaaatc tgttgggcag
2201 gactctcgta tgttactgaa gaactcctcc ttggtgttgg atgaatcaag
2251 aattcttctc cattccacgt tgctgttgcc aatactgttt ggagagcgcc
2301 ctcccagtcg aagctctcca aatgttctag ggctcgtgtc ctccttggtg
2351 atgtactcga atgctcgctt tggggcgttg agtccgtcga ttcttgggtg
2401 aatcgttcga ccgtctggga gtatgatgtt gaaaaacagg ttcccattga
2451 cgtcgagttt cttgtcacac tggataatac agtgtgtgtg gaatcctcct
2501 tcaggttgtt cttcagtagg ctgatgatgt tctagtgata ctgcaaggga
2551 tagaatcaca tatgattcta ataaagtctt cagtttctcg aatatataat
2601 ctttaaaatc cccacctatt tgagaatatg ttagaaaagc atttttcttt
2651 tgaaaacgta aataaccggg ttggttaggg gtaggtctgt ttctgtttgg
2701 agcacgtggc atgtttgttt tatttccctc ttccgtacaa tgaatgaaaa
2751 gaaattgtat atatgagagg aagaggaact taagaggaat gaggaactga
2801 agagggagta agagggataa ataggtaaac gcggataaga tt