Sequence of DPV Sweet potato leaf curl virus
Sweet potato leaf curl virus isolate GE31, complete genome.
ACC No: JX961670
Dated: 2012-10-28 | Length: 2829 | CRC: -1351760028
ID JX961670; SV 1; circular; genomic DNA; STD; VRL; 2829 BP.
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AC JX961670;
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DT 28-OCT-2012 (Rel. 114, Created)
DT 28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Sweet potato leaf curl virus isolate GE31, complete genome.
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KW .
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OS Sweet potato leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2829
RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.;
RT "Sweet potato leaf curl virus";
RL Unpublished.
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RN [2]
RP 1-2829
RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.;
RT ;
RL Submitted (11-OCT-2012) to the INSDC.
RL Crop Protection, National Academy of Agricultural Science, RDA, Suin-ro
RL 126th, Gwonseon-gu, Suwon, Gyeonggi-do 441-707, Republic of Korea
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FH Key Location/Qualifiers
FH
FT source 1. .2829
FT /organism="Sweet potato leaf curl virus"
FT /host="Ipomoea batatas"
FT /isolate="GE31"
FT /mol_type="genomic DNA"
FT /country="South Korea"
FT /collection_date="2011"
FT /db_xref="taxon:100755"
FT gene 72. .470
FT /gene="AV2"
FT CDS 72. .470
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /protein_id="AFV36749.1"
FT /translation="MITLLYKDQSGFRAWASRMEQLWDPLQNPLPDTLYGFRCMLSVKY
FT LQSILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAEISSIWGETGKTEAELRDSYR
FT ALHWECCPNCCPKLCPGFKRRPDEEKEG"
FT gene 295. .1059
FT /gene="AV1"
FT CDS 295. .1059
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFV36750.1"
FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK
FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTTYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQAVIRKFFKGLYNHVTYNHKEEAKYENQLE
FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT gene complement(1075. .1509)
FT /gene="AC3"
FT CDS complement(1075. .1509)
FT /codon_start=1
FT /gene="AC3"
FT /product="transcriptional enhancer protein"
FT /protein_id="AFV36751.1"
FT /translation="MDSRTRESLSHAQTTRALEFDTNPMSVGRTAPFHLRMMYVHESTQ
FT GRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN
FT LGFFSLVNLVFVIRYLPRVCSWIDEVDTVDCNDDVKVLLY"
FT gene complement(1226. .1672)
FT /gene="AC2"
FT CDS complement(1226. .1672)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcriptional activator protein"
FT /protein_id="AFV36752.1"
FT /translation="MSNLPSGIKRKCPIQEPLHAEAKKSKRKVPETRTRIVWKGCGCSA
FT FITQTCKYQHGFTHKGITKSCSDYESTRIRHQPHVCGSDCTVPSQNDVCPREHTGENHP
FT QIPAEGQLQGKEAAGISQDLPPIPDLDDPSNWCYSQLDWYFGTP"
FT gene complement(1581. .2675)
FT /gene="AC1"
FT CDS complement(1581. .2675)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication associated protein"
FT /protein_id="AFV36753.1"
FT /translation="MAPPKRFKIQAKNYFITYPRCSLSKEDCLAQLLNIQTPTNKKYIH
FT VARELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPNRSNHFHPNIQGAKSSSDVKSYV
FT DKDGDTITWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH
FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP
FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW
FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQAALKNWATANAIFCDVQSPF
FT WNQEEVSHSGATARGGEEEQEESS"
FT gene complement(2261. .2518)
FT /gene="AC4"
FT CDS complement(2261. .2518)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AFV36754.1"
FT /translation="MGNLTSMCWCSSKANSSAQIADSSIWYHRTDRITFTPTSRELNPR
FT PMSSPTLTRTGIPSPGVNSRSTADLLEEASRLLMTQPQRL"
XX
SQ Sequence 2829 BP; 740 A; 597 C; 690 G; 802 T; 0 other;
jx961670 Length: 2829 28-OCT-2012 Type: N Check: 9958 ..
1 accggtgccc gccgctccct ttaaaagtgg gccccacaag gggaccacgc
51 gtcttttccg tactttcttt aatgattact ttgctttata aggaccaatc
101 aggtttccgt gcttgggcgt caagaatgga gcagttgtgg gaccctttgc
151 agaacccact cccggatact ttatacggtt ttaggtgtat gctatccgta
201 aaatacttgc agagtatttt gaagaaatac gagccaggaa ccttagggtt
251 cgagctctgt tcggagttaa tccgtatatt cagggtcagg cagtatgaca
301 gggcgaattc ccgtttcgcg gagatttcat ccatatgggg ggagaccggt
351 aagacggagg ctgaacttcg agacagctat cgtgccctac actgggaatg
401 ctgtcccaat tgctgcccga agctatgtcc cggtttcaag aggcgtccgg
451 atgaagagaa ggaggggtga ccgcatcccg aagggatgtg tgggtccctg
501 taaggtccag gactatgagt tcaagatgga cgttccccac acgggaacgt
551 ttgtctgtgt ctcggatttt actaggggaa ctgggcttac ccatcgcctg
601 ggtaagcgtg tttgtgtgaa gtccatgggt atagatggga aggtctggat
651 ggatgacaat gtggccaaga gagatcacac caatatcatc acgtattggc
701 tgattcgtga cagaaggccc aataaggatc cgcttaactt tggccagatc
751 ttcacgacgt acgataatga gcccactact gctaagatcc gaatggatct
801 gagagataga atgcaggtct tgaagaagtt ctcggttaca gtttcaggag
851 gtccatacag ccacaaggag caggccgtaa ttaggaagtt ttttaagggt
901 ttgtataatc atgttactta caatcacaag gaagaagcga agtatgagaa
951 tcaattagag aatgcactta tgttgtatag tgctagtagt catgctagta
1001 atcccgtgta tcagaccctg cgttgcaggg cttatttcta tgattcgcac
1051 aataattaat aaaattatat tttattaata gagtaatacc tttacatcat
1101 cattacaatc tacagtatct acttcatcta tccaagaaca tactcttgga
1151 agatatctaa taacaaaaac taaattaact aaactaaaaa aacctaaatt
1201 tgctaattca ttacatatgc gccatttaag gcgttccaaa ataccagtcc
1251 aactgtgaat agcaccagtt agacgggtcg tcaagatccg gaattggagg
1301 aagatcttgt gaaatcccag ctgcctcctt tccctgtagt tgaccctcag
1351 ctggaatttg aggatggttc tcccctgtgt gctctcgtgg acatacatca
1401 ttctgagatg gaacggtgca gtccgaccca cagacatggg gttggtgtcg
1451 aattcgagtg ctctcgtagt ctgagcatga cttagtgatt cccttgtgcg
1501 tgaatccatg ctggtacttg caggtttggg tgatgaaggc tgaacagccg
1551 cagcccttcc acactatcct tgtccttgtt tcaggaactt tcctcttgct
1601 cttcttcgcc tccgcgtgca gtggctcctg aatgggacac ttcctcttga
1651 ttccagaagg gagattggac atcgcagaat atagcgtttg ctgttgccca
1701 attcttgagt gctgcttgct ctggtttatc taaccagagt ttaaatgaag
1751 agccctctcc tggattgcag aggaagatag tgggaattcc gcctttaatt
1801 tgaactggct ttccgtattt acagttggat tgccagtcct tctgggcccc
1851 catgaattcc ttaaagtgct ttaggtattg ggggttgacg tcatcaatga
1901 cgttatacca agcactgttg ctgtacactt tcgggcttag atctaaatgc
1951 ccacacaaat aattgtgagg gcccaaagac ctggcccata ctgttttgcc
2001 tattctgctt gggccttcaa taacaatgga tatgggtcta tccggccgcg
2051 cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcagga
2101 acggcattga aagaagaaga agaaaaaggg gaagaatata cagaaggagg
2151 aggagaaaaa atcctatcta aattactaac taaattatga aattgaaata
2201 aatatttttc agggagtttc tccctaatta tttgcaacgc agcttcttta
2251 gaacctgcgt ttagagcctc tgcggctgcg tcattagcag tctgctggcc
2301 tcctctagca gatctgccgt cgacctggaa ttcaccccag gtgatggtat
2351 ccccgtcctt gtcaacgtag gacttgacat cggacgagga tttagctccc
2401 tggatgttgg ggtgaaagtg attcgatctg ttcggtgata ccagatcgaa
2451 gaatctgcta tttgtgcaga cgaatttgcc ttcgaactgc accagcacat
2501 ggaggtgagg ttccccatcc tcgtgcagtt ctcttgctac gtgtatgtat
2551 tttttgttgg tgggtgtttg gatatttagg agttgggcta ggcagtcctc
2601 ttttgagaga gaacagcgtg gataagtaat aaaataattt ttggcctgaa
2651 ttttaaaacg ttttggagga gccatttgga gacacgcata agttcaaatg
2701 aattggagac tggagacaat atatagtatg tctccaaatg gcattctggt
2751 aatttagaag atccttttag ctttaattca aattccgaca actgtgggtc
2801 catcaaaagg cgggcaccgt attaatatt