Sequence of DPV Sweet potato leaf curl China virus
Sweet potato leaf curl virus isolate Muan-GE31, complete genome.
ACC No: JX961674
Dated: 2012-10-28 | Length: 2788 | CRC: -300202260
ID JX961674; SV 1; circular; genomic DNA; STD; VRL; 2788 BP.
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AC JX961674;
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DT 28-OCT-2012 (Rel. 114, Created)
DT 28-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Sweet potato leaf curl virus isolate Muan-GE31, complete genome.
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KW .
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OS Sweet potato leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2788
RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.;
RT "Sweet potato leaf curl virus";
RL Unpublished.
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RN [2]
RP 1-2788
RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.;
RT ;
RL Submitted (11-OCT-2012) to the INSDC.
RL Crop Protection, National Academy of Agricultural Science, RDA, Suin-ro
RL 126th, Gwonseon-gu, Suwon, Gyeonggi-do 441-707, Republic of Korea
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FH Key Location/Qualifiers
FH
FT source 1. .2788
FT /organism="Sweet potato leaf curl virus"
FT /host="Ipomoea batatas"
FT /isolate="Muan-GE31"
FT /mol_type="genomic DNA"
FT /country="South Korea"
FT /collection_date="2011"
FT /db_xref="taxon:100755"
FT gene 91. .432
FT /gene="AV2"
FT CDS 91. .432
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /protein_id="AFV36773.1"
FT /translation="MELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCS
FT DLIRILRVKQYARANSRFSEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFS
FT KRPDEEKEG"
FT gene 257. .1021
FT /gene="AV1"
FT CDS 257. .1021
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFV36774.1"
FT /translation="MPGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK
FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE
FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT gene complement(1038. .1472)
FT /gene="AC3"
FT CDS complement(1038. .1472)
FT /codon_start=1
FT /gene="AC3"
FT /product="transcriptional enhancer protein"
FT /protein_id="AFV36775.1"
FT /translation="MDSRTGESLSHAQTMRAVEFFDNPMSVGRTAPFYLKCLYAHQSVA
FT GRTILKFQLQVNHRERKQLGFHKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNELSS
FT LGYLSLYNLVYVIRSLPHKFLWVEEVDVNDCKDDVKTLLY"
FT gene complement(1189. .1632)
FT /gene="AC2"
FT CDS complement(1189. .1632)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcriptional activator protein"
FT /protein_id="AFV36776.1"
FT /translation="MSEAHSGDKRKAPIQEPIHAAAKKKRRIPEQRTRIVWKQCGCSAF
FT ITPQCKYQNGFTHWGITKSCTDYESSRILRQSHVCGSDCSVLPQVFIRPPERSGENNPQ
FT VPAASEPQREEATGIPQDLSPIQDNYNPSDWCYSQLDWYFDTP"
FT gene complement(1565. .2635)
FT /gene="AC1"
FT CDS complement(1565. .2635)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication associated protein"
FT /protein_id="AFV36777.1"
FT /translation="MAAPKRFRVSSKNYFITYPRCSLSKEDALEQILKINTPTNKKYIH
FT IARELHEDGEPHLHMLVQFEGKFVCTNSRFFDLVSPSRSSHFHPNIQGAKSSSDVKSYV
FT EKDGDTLTWGEFQIDGRSARGGQQTANDAASEALNSGSKEAALQIIREKLPEKFIFQYH
FT NLVSNLDRIFSPPPSVYSSPFSSSSFNNVPDIISNWAADNIMDAAARPDRPISIVIEGP
FT SRIGKTVWARSLGPHNYLCGHLDLSPRVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGEGSSFKSWLDKPEQDALRQWACKNAIFCNVRSPF
FT WRQEEGANSGTNSRSG"
FT gene complement(2221. .2478)
FT /gene="AC4"
FT CDS complement(2221. .2478)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AFV36778.1"
FT /translation="MGNLISTCWCSSKANSSAQIADSSTWYPLPGHLIFTPTSRELNPA
FT PMSSPTSRRTGILSPGVNSRSTADLLEEVSRLLMTRHQRP"
XX
SQ Sequence 2788 BP; 734 A; 585 C; 639 G; 830 T; 0 other;
jx961674 Length: 2788 28-OCT-2012 Type: N Check: 3944 ..
1 accggtgccc gcgcctccct tttattgtgg gccccacacg ctttacttta
51 attattaaag acgtgcctgt tgcagacttg gtcgccaaga atggagttgt
101 gggacccgct tcagaaccct ctcccagata ctttatacgg ttttcggtgt
151 atgctttctg taaaatacct gcaaagtatt ttgaagaaat acgagccagg
201 aaccctaggg ttcgagctct gctctgatct aatccgcata ctgcgtgtca
251 agcagtatgc cagggcgaat tcccgtttct cggagatttc atccctatgg
301 ggggagaccg gtaagacgga ggctgaactt cgagacagct atcgtgccct
351 acactgggaa tgctgtccca attgctgccc gaagctatgt cccggtttct
401 cgaagcgtcc agatgaagag aaggaagggt gatcgcatcc caaagggatg
451 tgtgggtccc tgtaaggtac aggactatga gttcaagatg gatgtcccgc
501 acagtggtac ctttgtctgt gtgtctgatt tcactagggg aactgggctt
551 acccatcgat tgggtaagag ggtgtgtgtt aagtccatgg gcattgatgg
601 taaggtctgg atggacgaca atgtcgccaa acgagaccac accaacatca
651 tcacttactg gttgatccgt gataggaggc ccaataagga tccattaacg
701 tttagtcagg cctttactat gtatgataat gagcccacta cagctaagat
751 ccgaatggat ctgagagata gaatgcaggt attgaagaaa ttctctgtaa
801 cagtttctgg tgggccttat aaccacaagg aacaggcatt agttaggaag
851 ttttttaagg gtttgtataa ccatgttacg tacaaccata aggaggaagc
901 taagtatgaa aatcatttag agaatgcttt gatgttgtat tctgctagca
951 gtcatgctag caatcctgta tatcagactc tgcgttgtag ggcttatttt
1001 tatgattcac acaataatta ataaaattgt tctttcatta atatagtaat
1051 gtttttacat cgtctttaca atcgtttaca tctacttctt ctacccacaa
1101 gaacttgtgg ggtaaactcc taattacata aactaagtta tacaatgata
1151 aataacctaa actacttaat tcattacaaa ttcgccattt aaggcgtgtc
1201 aaaataccag tccaactgtg aataacacca gtcagacggg ttgtaattat
1251 cctgaattgg agaaagatct tgtggaatcc cagttgcttc ctctctctgt
1301 ggttcacttg cagctggaac ttgaggattg ttctccccgc tacgctctgg
1351 tgggcgtata aacacttgag gtagaacgga gcagtccgac ccacagacat
1401 gggattgtcg aagaattcga ctgctctcat agtctgtgca tgacttagtg
1451 attccccagt gcgtgaatcc attctggtat ttgcactgag gagttatgaa
1501 agcggaacag ccgcactgct tccacactat ccttgtcctt tgctctggta
1551 tgcggcgttt ttttttagcc gctgcgtgaa ttggttcctg aattggcgcc
1601 ttcctcttgt ctccagaatg ggcttctgac attacagaat atggcgttct
1651 tgcaagccca ctgcctcagt gcgtcttgtt ctggcttatc tagccaggat
1701 ttaaatgagg atccttcgcc tggattgcag aggaagatag tgggtattcc
1751 acctttaatt tgaactggct ttccgtactt tgtgtttgat tgccagtcct
1801 tctgggcccc cataaattct ttaaagtgct ttaggtattg ggggttgacg
1851 tcatcaatga cgttatacca agcactatta ctgtacactc ttggactcag
1901 atccaagtgc ccacatagat aattgtgtgg accaagagac cgagcccaaa
1951 ctgttttacc tatcctactt gggccttcta taactatact aatgggccta
2001 tctggccgcg cagcggcatc catgatgtta tcagcagccc aattgctgat
2051 aatatcaggt acattattga aagatgaaga agaaaaagga gaagaatata
2101 cagaaggagg aggagaaaaa atcctatcta aattactaac taaattatga
2151 tattgaaaaa taaatttttc tgggagtttc tcccttatta tttgtaatgc
2201 agcctccttg ctgccggaat ttaaggcctc tgatgccgcg tcattagcag
2251 tctgctgacc tcctctagca gatctgccgt cgatctggaa ttcaccccag
2301 gtgagagtat ccccgtcctt ctcgacgtag gacttgacat cggagctgga
2351 tttagctccc tggatgttgg ggtgaaaatg agatgacctg gaaggggata
2401 ccaggtcgaa gaatctgcta tttgtgcaga cgaatttgcc ttcgaactgc
2451 accagcatgt ggagatgagg ttccccatcc tcgtgaagtt ctctggctat
2501 gtggatatat tttttgtttg tgggtgtgtt tattttcagt atttgctcta
2551 aagcatcttc tttagagaga gaacatcgtg gataagtaat aaaataattt
2601 ttagaagaaa ctctaaaccg tttaggagct gccatctgta ttggtgacaa
2651 tccaaacttg ctgaatgaat tggtgactgg tgacaattta tactatgtca
2701 ccaaatggca ttatggtaat ttgaacaact ttaatttgaa atctgaaatc
2751 gtattggtcc tccgtaaagc gggcaccgct ataatatt