Sequence of DPV Tomato leaf curl China virus
Leaf curl China virus - OX2, complete sequence.
ACC No: JX972142
Dated: 2013-05-08 | Length: 2744 | CRC: -859984611
ID JX972142; SV 1; circular; genomic DNA; STD; VRL; 2744 BP.
XX
AC JX972142;
XX
DT 08-MAY-2013 (Rel. 116, Created)
DT 08-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE Leaf curl China virus - OX2, complete sequence.
XX
KW .
XX
OS Leaf curl China virus - OX2
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2744
RA Li Z., Qin B., Cai J.;
RT "Molecular Identification of Geminiviruses Infecting Oxalis corniculata
RT L.";
RL Unpublished.
XX
RN [2]
RP 1-2744
RA Li Z., Qin B., Cai J.;
RT ;
RL Submitted (15-OCT-2012) to the INSDC.
RL Institute of Plant Protection, Guangxi Academy of Agricultural Sciences,
RL 174 Daxue East Road, Nanning, Guangxi 530007, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /organism="Leaf curl China virus - OX2"
FT /segment="DNA A"
FT /host="Oxalis corniculata"
FT /strain="OX2"
FT /mol_type="genomic DNA"
FT /country="China:Nanning"
FT /collected_by="Zhanbiao Li"
FT /identified_by="Zhanbiao Li"
FT /db_xref="taxon:1329381"
FT gene 129. .479
FT /gene="AV2"
FT CDS 129. .479
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /note="coat protein"
FT /protein_id="AGK90093.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL
FT ILVVRARDYVEASRRYSHFHSRIQGASPVELRQPLYQPCCCPHCPRHKQKEIMGQSAHV
FT SKAQDVQDVQKP"
FT gene 289. .1062
FT /gene="AV1"
FT CDS 289. .1062
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AGK90094.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTSRAAAPTVLVTNKRKSW
FT VNRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGVGLTH
FT RVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPSDFQQVFNVYDNE
FT PSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYEN
FT HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT gene complement(1059. .1463)
FT /gene="AC3"
FT CDS complement(1059. .1463)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AGK90095.1"
FT /translation="MDSRTGELITATQAENGVFIWEITNPLYFKITELQNRPFLSNNDI
FT VKVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN
FT VIRAVNYVLWDALTQTTFVQSSHVIKFNLY"
FT gene complement(1204. .1611)
FT /gene="AC2"
FT CDS complement(1204. .1611)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AGK90096.1"
FT /translation="MQSSSASPNQCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSL
FT NCANHGFTHRGTHHCHSGREWRFYLGDNKSPVFQDNGTTKQALPVEQRHSEGQDPIQLQ
FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI"
FT gene complement(1511. .2596)
FT /gene="AC1"
FT CDS complement(1511. .2596)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AGK90097.1"
FT /translation="MPQPKKFIINARNYFLTYPHCSLTKEETLSQILALATPINKLFIR
FT ICRELHEDGSPHLHVLIQFEGKYKCQNKRFFDLTSPTRSAHFHPNIQAAKSSTDVKSYM
FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALSILREKAPKDYVLQYH
FT NLNNNLDKIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSARPLRPISIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAIFVSITEPMY
FT SGTHQSPAQDSQEENNQETED"
FT gene complement(2146. .2439)
FT /gene="AC4"
FT CDS complement(2146. .2439)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AGK90098.1"
FT /translation="MGLLTCMCSSNLKANTNAKTKDSSISHPQPGQHISIRTFRQLKAQ
FT QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSVY"
XX
SQ Sequence 2744 BP; 726 A; 569 C; 611 G; 838 T; 0 other;
jx972142 Length: 2744 08-MAY-2013 Type: N Check: 5968 ..
1 accggaaggc cccccaattt tttaaagtgg tcccccccac tcagtaatgt
51 ccaatcatga ccgcgcctca aagcttaatt attatgtggt cctgtatata
101 acttcggccc caaggagtca ttttaaacat gtgggatcca ttgttaaacg
151 agttcccaga aaccgtacat ggtttcaggt gtatgctcgc cattaagtat
201 ttgcagttgg tagaaaatac atactctccg gatacgttag ggtacgattt
251 aattcgtgat ttaattttag ttgttcgtgc tcgagattat gtcgaagcgt
301 cccgcagata tagtcatttc cactcccgca tccaaggtgc gtcgccggtt
351 gaacttcgac agcccttata ccagccgtgc tgctgccccc actgtcctcg
401 tcacaaacaa aaggaaatca tgggtcaatc ggcccatgta tcgaaagccc
451 aggatgtaca ggatgttcag aagccctgat gttccacgag gctgtgaggg
501 tccgtgtaag gtccaatctt tcgatgcaaa gaatgatatc ggtcacatgg
551 gtaaggtcat atgtctgtct gatgttacaa ggggagtggg tttgacccat
601 cgtgttggta aacgtttctg cgttaagtca ctgtattttg ttggcaagat
651 ttggatggat gaaaacatca aggtgaagaa ccacactaac accgttatgt
701 tctggatagt gagggataga cgtcctagtg gcacccctag tgattttcag
751 caggtcttta atgtttatga taacgagccg tctaccgcta ctgttaagaa
801 cgatcagcgc gatcgttacc aagtgatacg caggtttcag gcaacggtca
851 ctggtggaca atatgcagct aaggaacagg cgataattag aagattttat
901 cgtgttaata attacgtagt gtataatcac caggaagctg ggaagtacga
951 gaaccatact gaaaatgctc tgttgttgta tatggcatgt acgcatgcct
1001 ctaatcccgt gtatgctact ttgaaagtga ggagttattt ctatgactca
1051 gtcacgaatt aataaagatt aaattttatt acatgagaac tttgtacaaa
1101 tgttgtttgc gttaatgcgt cccataatac ataattcact gctctaatta
1151 cattattcaa actaattaca cccaaattat tgagaaactt caaaacttgt
1201 gtcctaaata ctcttaagaa acgaccagtc tgaaggtgtg agttcgtcca
1251 tatccggaag tccagaaaac attggtgcat ccccagtgct ttcctcaggt
1301 tgtagttgaa ttggatcctg accttcacta tgtcgttgtt cgacaggaag
1351 ggcctgtttt gtagttccgt tatcttgaaa tacaggggat ttgttatctc
1401 ccagataaaa acgccattct ctgcctgagt ggcagtgatg agttcccctg
1451 tgcgtgaatc catggttggc gcagttaagt gagctgaaat aagaacaacc
1501 acagggaagg tcaatcctcc gtctcctggt tattttcttc ttggctatcc
1551 tgtgctggac tttgatgggt acctgagtac attggttcgg tgatgctgac
1601 gaagattgca ttctttattg cccacgactt taatgctgtg ttcttttcct
1651 cgtctaggta ctctttatag ctggaattgg gccctggatt gcacaggaag
1701 atagcgggaa tgccaccttt aatttgaacc ggctttccgt acttggtatt
1751 tgattgccag tccctttggg cccccatgaa ttctttaaaa tgttttagat
1801 agtgcggatc gacgtcatca atgacgttgt accaggcatc attattgtat
1851 acctttggac ttaaatcaag atgaccacac aaataattat ggggtcctaa
1901 tgacctggcc cacattgtct tccccgtccg gctatctcct tcgataacta
1951 tacttatcgg tcttaatggc cgcgcagaac tgacaacgtt ctctgcagcc
2001 cactcttcga gttcctccgg aactcgatca aacgaagaag aagaaaaagg
2051 cgaaacataa acctccatcg gaggtgtaaa aatcttatct aaattattat
2101 ttaaattatg atactgtaaa acataatctt taggagcttt ctcccttagt
2151 atactgaggg ccgaagcttt ggaccctgaa ttgattgcct cggcatatgc
2201 gtcgttggca gattggcaac ctcctctagc cgatcttcca tcgatctgga
2251 aaactccatg atcaagcacg tctccgtctt tgtccatgta ggacttgaca
2301 tctgttgagc ttttagctgc ctgaatgttc ggatggaaat gtgctgacct
2351 ggttggggat gtgagatcga agaatctttt gttttggcat ttgtatttgc
2401 cttcaaattg gatgagcaca tgcaggtgag gagacccatc ttcgtgtaac
2451 tctctgcaga ttcttatgaa taatttatta ataggtgttg ctagggctaa
2501 aatttgggaa agtgtttctt ctttggtcag ggagcagtgt ggatatgtga
2551 ggaaataatt ccttgcattt attataaatt tttttggttg aggcatttga
2601 cttggtcaaa cgggtcctct caaacttccc tatgcaatcg gggaatgggt
2651 ccttatttat atgtgaggac ctaaatggca ctattgtaaa tagtttaaag
2701 aaattcaaaa ttcaaaatcc aaaagcggcc atccgtataa tatt