Sequence of DPV Andean potato latent virus

Andean potato latent virus isolate Ec-1 coat protein gene, complete cds.

ACC No: JX982332

Dated: 2013-05-12 | Length: 567 | CRC: 1107426729

                
ID   JX982332; SV 1; linear; genomic RNA; STD; VRL; 567 BP.
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AC   JX982332;
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DT   12-MAY-2013 (Rel. 116, Created)
DT   12-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Andean potato latent virus isolate Ec-1 coat protein gene, complete cds.
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KW   .
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OS   Andean potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Tymoviridae; Tymovirus.
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RN   [1]
RP   1-567
RX   DOI; 10.1016/j.virusres.2013.01.014.
RX   PUBMED; 23357297.
RA   Kreuze J., Koenig R., De Souza J., Vetten H.J., Muller G., Flores B.,
RA   Ziebell H., Cuellar W.;
RT   "The complete genome sequences of a Peruvian and a Colombian isolate of
RT   Andean potato latent virus and partial sequences of further isolates
RT   suggest the existence of two distinct potato-infecting tymovirus species";
RL   Virus Res. 173(2):431-435(2013).
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RN   [2]
RP   1-567
RA   Koenig R.;
RT   ;
RL   Submitted (17-OCT-2012) to the INSDC.
RL   Institute for Epidemiology and Pathogen Diagnostics, Julius Kuhn Institute,
RL   Messeweg 11, Braunschweig D38104, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1. .567
FT                   /organism="Andean potato latent virus"
FT                   /isolate="Ec-1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:73819"
FT   CDS             1. .567
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AGL11971.1"
FT                   /translation="MASSTVTIAKQPSINAPGHVLPTPSSELSPSMVLPFQFVATTFGM
FT                   AETAAQITLVSSSVINKLMLSYRHCQLVECSAELTPLAGAVSNPLSVNLVWVSANSTGA
FT                   PTDILNIYGGSSFVLGGPITAPIPISVPLPSNSVNVVLKDSTIYTDTPKLLAYSPLPAS
FT                   PSKTPTASLQIRGKLRLSSPLLQPN"
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SQ   Sequence 567 BP; 113 A; 216 C; 82 G; 156 T; 0 other;

jx982332 Length: 567  12-MAY-2013  Type: N  Check: 5672  ..

       1  atggcctcat ccaccgtcac cattgctaaa caaccttcca tcaatgctcc
      51  cggtcatgtc ctccctaccc cctcttcaga gttatctcca tccatggttc
     101  ttcccttcca atttgtggct accacatttg gaatggctga aacagctgcc
     151  caaatcactc tcgtttcctc ctctgtcatc aacaagctca tgctttccta
     201  ccgccattgc caacttgttg agtgctcagc cgagctaact cccttggccg
     251  gcgctgtttc aaatcctctc tctgtcaacc ttgtctgggt ttccgcaaat
     301  tccactggag ctcccaccga catcctcaac atctacggtg gttcctcttt
     351  cgtccttgga ggccccatca ccgctcccat ccccatttca gtacccctcc
     401  catccaactc tgtgaatgtt gtcttgaaag acagcaccat ctacactgac
     451  acccccaagt tgctggccta ctcccctctc ccagcttctc cttccaaaac
     501  tccaaccgcg tctctacaaa ttcgcggcaa actccgcctt tcatcccccc
     551  ttctccaacc caattag