Sequence of DPV Influenza C virus
Influenza C/California/78, hemagglutinin (seg 4), cDNA.
ACC No: K01689
Dated: 2000-03-04 | Length: 2071 | CRC: -533378438
!!NA_SEQUENCE 1.0
ID ORCC78HA standard; RNA; VRL; 2071 BP.
XX
AC K01689;
XX
SV K01689.1
XX
DT 07-NOV-1985 (Rel. 07, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 6)
XX
DE Influenza C/California/78, hemagglutinin (seg 4), cDNA.
XX
KW glycoprotein; haemagglutinin.
XX
OS Influenzavirus C
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae.
XX
RN [1]
RP 1-2071
RX MEDLINE; 84138802.
RA Nakada S., Creager R.S., Krystal M., Aaronson R.P., Palese P.;
RT "Influenza C virus hemagglutinin: Comparison with influenza A and B virus
RT hemagglutinins";
RL J. Virol. 50:118-124(1984).
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DR SWISS-PROT; P03465; HEMA_INCCA.
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CC The location of the hemagglutinin gene was deduced by computer
CC analysis of influenza C/Cal/78 and comparison with the
CC organizations of influenzas B/Lee/40 and A/PR/8/43. The alignment
CC of the amino acid sequence of the C virus HA remains tentative,
CC since it is based solely on structural homologies. Plus strand is
CC shown.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2071
FT /db_xref="taxon:11552"
FT /organism="Influenzavirus C"
FT CDS 22. .1986
FT /codon_start=1
FT /db_xref="SWISS-PROT:P03465"
FT /note="hemagglutinin precursor (putative); putative"
FT /protein_id="AAA43791.1"
FT /translation="MFFSLLLMLGLTEAEKIKICLQKQVNSSFSLHNGFGGNLYATEEK
FT RMFELVKPKAGASVLNQSTWIGFGDSRTDQSNSAFPRSLMSAKTADKFRSLSGGSLMLS
FT MFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLNFQKSIYELASQSH
FT CMSLVNALDKTIPLQVTKGVAKNCNNSFLKNPALYTQEVKPLEQICGEENLAFFTLPTQ
FT FGTYECKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSG
FT DTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGPVTAVQSIWGKGRKSDYA
FT VDQACLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPF
FT TEEYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTTVTKPKSRIFGIDDLIIGLLF
FT VAIVEAGIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILRSSTNIAIEKLNDRISH
FT DEQAIRDLTLEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAV
FT EVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTIPPLDTKIDLQSDPFYWGSSLGLAIT
FT AANLMAALVISGIAICRTK"
FT sig_peptide 22. .63
FT /note="hemagglutinin signal peptide (putative); putative"
FT mat_peptide 64. .1356
FT /note="hemagglutinin HA1 chain (putative); putative"
FT mat_peptide 1357. .1983
FT /note="hemagglutinin HA2 chain (putative); putative"
XX
SQ Sequence 2071 BP; 696 A; 381 C; 440 G; 554 T; 0 other;
K01689 Length: 2071 September 18, 2002 10:52 Type: N Check: 4604 ..
1 agcaaaagca ggggtttaat aatgtttttc tcattactct tgatgttggg
51 cctcacagag gctgaaaaaa taaagatatg ccttcaaaag caagtgaaca
101 gtagcttcag cctacacaat ggcttcggag gaaatttgta tgccacagaa
151 gaaaaaagaa tgtttgagct tgttaagccc aaagctggag cctctgtctt
201 gaatcaaagc acatggattg gctttggaga ttcaagaact gaccaaagca
251 attcagcttt tcctaggtcg ctgatgtcag caaaaactgc tgataaattt
301 cgttctttgt ctggtggatc cttgatgttg agtatgtttg gcccacctgg
351 gaaggtagat tacctttacc aaggatgtgg aaagcataaa gttttttatg
401 aaggagtcaa ctggagtcca catgctgcta tagattgtta cagaaaaaat
451 tggactgaca tcaaactgaa tttccagaaa agcatttatg aattggcttc
501 acaatcacat tgcatgagct tggtgaatgc cttggacaaa actattcctt
551 tacaagtgac taaaggagtt gcaaaaaatt gcaacaacag cttcttaaaa
601 aatccagcat tgtacacaca agaagtcaaa cctttagagc aaatatgtgg
651 ggaagaaaat cttgcttttt tcacacttcc aacccaattt ggaacctatg
701 agtgcaaact gcatcttgtg gcttcttgct atttcatcta tgatagcaaa
751 gaagtgtaca ataaaagagg atgtggcaac tactttcaag tgatctatga
801 ttcatctgga aaagttgttg gagggctaga taacagggta tcaccttaca
851 cagggaattc tggagacact ccaacaatgc aatgtgacat gctccagctg
901 aaacctggaa gatattcagt aagaagctct ccaagattcc ttttaatgcc
951 tgaaaggagt tattgctttg acatgaaaga aaaaggacca gtcactgctg
1001 tccaatccat ctggggaaaa ggcagaaaat ctgactatgc agtagatcag
1051 gcttgcttga gcactccagg gtgcatgttg atccaaaagc aaaagccata
1101 cattggagag gctgatgatc accatggaga tcaagaaatg agggagttgc
1151 tgtcaggact ggactatgaa gctagatgca tatcacaatc agggtgggtg
1201 aatgaaacca gtccttttac ggaagaatac ctccttcctc ccaaatttgg
1251 aagatgtccc ttggccgcaa aggaagaatc cattccaaaa atcccagatg
1301 gacttctaat tcccaccagt ggaactgata ccactgtaac caaacctaaa
1351 agcagaattt ttggaatcga tgaccttatt attggtctac tatttgttgc
1401 aattgttgaa gcaggaattg gaggctatct gcttggaagt agaaaagaat
1451 caggaggagg tgtgacaaaa gaatcagctg aaaaagggtt tgaaaaaatt
1501 ggaaatgaca tacaaatctt aagatcttct acaaatattg caatagaaaa
1551 actgaacgac agaatttctc atgatgagca agccatcaga gatctaactt
1601 tagaaattga aaatgcaaga tctgaagctc tattaggaga attgggaata
1651 ataagagcct tgctggtagg aaatataagc ataggattac aagaatcttt
1701 atgggaacta gcttcagaaa taacaaatag agcaggagac ctggcagtcg
1751 aagtctctcc aggttgctgg ataatcgaca ataacatttg tgatcaaagt
1801 tgtcaaaact ttattttcaa gttcaacgaa actgcgcctg ttccaaccat
1851 tccccctctt gacacaaaaa ttgatctgca atcagatcct ttttactggg
1901 gaagcagctt gggcttagca ataactgctg ctaatctaat ggcagctttg
1951 gtgatctctg ggatcgccat ctgcagaact aaatgatcag gacaattttg
2001 aaaaatggat aatatattag tcaatatttt gtacagcttt ataaaaaaac
2051 aaaaaacccc ttgctactgc t