Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus isolate India:Varanasi:French bean:2011 clone 1 segment DNA-A, complete sequence.
ACC No: KC019303
Dated: 2013-02-19 | Length: 2738 | CRC: 632122378
ID KC019303; SV 1; circular; genomic DNA; STD; VRL; 2738 BP.
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AC KC019303;
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DT 19-FEB-2013 (Rel. 115, Created)
DT 19-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE Mungbean yellow mosaic India virus isolate India:Varanasi:French bean:2011
DE clone 1 segment DNA-A, complete sequence.
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KW .
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OS Mungbean yellow mosaic India virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2738
RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.;
RT "Molecular Characterization of Bean Dwarf Mosaic Begomovirus";
RL Unpublished.
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RN [2]
RP 1-2738
RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.;
RT ;
RL Submitted (29-OCT-2012) to the INSDC.
RL School of Life Sciences, Central University of Gujarat, Sector-30,
RL Gandhinagar, Gujarat 382030, India
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .2738
FT /organism="Mungbean yellow mosaic India virus"
FT /segment="DNA-A"
FT /host="Phaseolus vulgaris"
FT /isolate="India:Varanasi:French bean:2011"
FT /mol_type="genomic DNA"
FT /country="India"
FT /collected_by="A K Singh"
FT /collection_date="04-Feb-2011"
FT /identified_by="A K Singh"
FT /clone="1"
FT /db_xref="taxon:223287"
FT gene 149. .490
FT /gene="AV2"
FT CDS 149. .490
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AGF33891.1"
FT /translation="MWDPLLNDFPESLHGFRCMLAIKYLQQVQENYPSNSLGFLYLTGL
FT IQVLRIRNHAQADLRYGLLYPDIECTEKIKLRYPARAACVCGRCPYQHEEKTLDQPPHV
FT EETSVLPTV"
FT gene 309. .1082
FT /gene="AV1"
FT CDS 309. .1082
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /note="role in encapsidation of virus particles"
FT /protein_id="AGF33892.1"
FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLVLPASVGGVPTNMKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQKHDIAHTGKVICISDVTRGNGITH
FT RIGKRFCIKAVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRKFSATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
FT gene complement(1079. .1483)
FT /gene="AC3"
FT CDS complement(1079. .1483)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AGF33893.1"
FT /translation="MDFRTGEYITAAQLKSGVYIWEVQNPLSFKIMHHSPILAGSRMMM
FT TELRIMFNHGLKKALGMHKCFLDLKLYHYLTATSGMILSIFRRQLFKFLNNLGVISLAN
FT ILYFATDFLYVKLHLVEDVNFTHNVQYKLY"
FT gene complement(1221. .1673)
FT /gene="AC2"
FT CDS complement(1221. .1673)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /note="TrAP"
FT /protein_id="AGF33894.1"
FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS
FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV
FT QNDDDRAAHNVQPRVEESTGDAQVLPGLEALPLFDGDFWDDLIDLP"
FT gene complement(1531. .2619)
FT /gene="AC1"
FT CDS complement(1531. .2619)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiator protein"
FT /note="Rep"
FT /protein_id="AGF33895.1"
FT /translation="MPREGRFAINARNYFLTYPRCPLTKEDALEQLLALSTPVNKKFIR
FT ICRELHEDGQPHLHVLLQFEGKQQTRNQRFFDLYSRCRSTHYHPNIQAAKSCSDVKTYM
FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH
FT NLNCNLSRIFTEPIQAYKSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD
FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL
FT FSTVNQGSTQGRQEESNSTISN"
FT gene complement(2169. .2468)
FT /gene="AC4"
FT CDS complement(2169. .2468)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AGF33896.1"
FT /translation="MKMDNLISMFCFSSKGSNKRGTKGSSTSIPDAGQHITIRTFRQLR
FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY"
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SQ Sequence 2738 BP; 731 A; 572 C; 610 G; 825 T; 0 other;
kc019303 Length: 2738 19-FEB-2013 Type: N Check: 771 ..
1 acctgagtgc cccgcgaccg gtgtattggg gttactttaa cttttttgct
51 tttgtttatc tttagtcgtt caatcagaag cgctcctcag cgctatgtta
101 attcaaattt gaattataaa gcaagtggac actctgaacc cactaacaat
151 gtgggatcca ttgttgaacg actttcccga atcactgcat ggattccggt
201 gcatgttggc aataaagtat ttgcagcaag ttcaagagaa ttatccatct
251 aattctcttg gttttttgta ccttacaggg ttaattcagg tattgcgcat
301 ccggaatcat gcccaagcgg acctacgata cggccttctc taccccgata
351 tcgaatgcac ggagaagatt aaacttcgat accccgctcg tgctgcctgc
401 gtctgtggga ggtgtcccta ccaacatgaa gagaagacgt tggaccaacc
451 gccccatgtg gaggaaacct cggttttacc gactgtatag gtcccctgat
501 gtccctcgtg gttgtgaggg accatgtaaa gttcaatcat ttgagcaaaa
551 gcatgatatt gcccacacag gcaaagtgat ttgcatatct gacgtgacta
601 gaggtaatgg aattacacat cgtattggca aacgattttg catcaaggcc
651 gtgtacatta ctggtaaggt ttggatggac gaaaatatta agtctaaaaa
701 tcacacgaac actgtgatgt tcaagttatg tcgtgacaga cgaccttttg
751 gtacacccat ggattttggt caagtgttca acatgtatga caatgagccc
801 agtacagcta ctgtgaagaa cgatctgcgt gatcgttatc aagtcttgcg
851 aaagtttagt gccactgtta ctggtggcca atatgcttgt aaggaacaag
901 ccatggtgaa tcgttttttc aaagttaata attatgttgt ttacaaccac
951 caggaggcag cgaagtatga gaaccatact gagaacgcat tattattgta
1001 tatggcatgt actcatgcct caaatcctgt gtatgcaaca cttaaaattc
1051 ggatctattt ttatgattcg atattgaatt aataaagttt gtattgaaca
1101 ttatgcgtaa agtttacatc ctccaccaaa tggagtttta catacaggaa
1151 atccgtcgcg aaatataaaa tatttgctaa gctaatgact cctaaattat
1201 ttagaaactt aaataattgt ctacggaaga tcgataagat catcccagaa
1251 gtcgccgtca aataatggta gagcttcaag tccaggaagc acttgtgcat
1301 ccccagtgct ttcttcaacc cgtggttgaa cattatgcgc agctcggtca
1351 tcatcattct ggaccctgct agaattggac tgtggtgcat gatcttgaaa
1401 gagaggggat tttgcacctc ccagatatag acgccactct tgagttgagc
1451 tgcagtgatg tactcccctg tgcgaaaatc catagttgcg gcagttgatg
1501 tggatgtaat agctacaccc acaggttaga tcaattcgag atcgtcgaat
1551 tgctctcttc ttggcgaccc tgtgttgaac cttgattgac ggtggagaac
1601 agtggttctt tgagggtgta gaattccgca ttctttgaag cccactgttt
1651 aagcgcagca ttgttctctt catccaagta ctctttatag gacgacttgg
1701 gaccagggtt acacagaaag atggtgggga taccaccttt aattttagtg
1751 ggcttcccgt acttgacgtt agactgccag tctctttgcg cgcccatgaa
1801 ttctttgaaa tgtttcaaat aatgtggatc aacgtcatcg atgacgttgt
1851 accatgcctc gttagagtat gttttgtcgt ttagatccaa atggccgcaa
1901 agataattat gaggacctat ggcacgtgcc cacatggttt tacccgtgcg
1951 actatctcct tcaataacaa tactaatagg tctatctggc cgcgcagcgg
2001 gatctctcac atttctttca gcccatgaag aaatgtagct gggaaccttg
2051 ttgaatgatt ctaatgtaaa aggcgactta tatgcctgaa taggctctgt
2101 gaatatccga gacaaattac aatttaagtt atgaaattgt aaaataaaat
2151 ccttgggagc cttttctttt aatataagga gggcctccaa ctttgatcca
2201 gagttgagtg cctcggcgta tgcgtcgttg gcagattgtt tacctcctct
2251 agctgatctg ccatcgattt ggaaggttcc atgatcaaga atgtctccgt
2301 ctttctccat gtatgtttta acatctgagc agctcttagc tgcctgaatg
2351 ttcggatggt aatgtgttga ccggcatctg gaatagaggt cgaagaacct
2401 ttggttcctc gtttgttgct tcccttcgaa ctgaagcaga acatggagat
2451 gaggttgtcc atcttcatgg agttcacgac agatgcggat gaacttcttg
2501 ttaaccggtg ttgacaacgc gagaagttgt tcaagagcgt cctcctttgt
2551 aagaggacat ctgggatatg tcaagaaata gtttcttgcg tttatagcaa
2601 aacgaccttc ccttggcata tttgaagtcg ttttgtatcg gtgtacaccg
2651 attacttctc tatcccccta tcggtgtatc ggtgtactat atatactaga
2701 gctactaaaa gcccataggg gcactcagct ataatatt