Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate G2 nuclear inclusion protein A gene, partial cds.

ACC No: KC155246

Dated: 2013-02-12 | Length: 725 | CRC: 1146195135

                
ID   KC155246; SV 1; linear; genomic RNA; STD; VRL; 725 BP.
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AC   KC155246;
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DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Papaya ringspot virus P isolate G2 nuclear inclusion protein A gene,
DE   partial cds.
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
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RN   [2]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (11-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .725
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="G2"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Gadag, Karnataka"
FT                   /isolation_source="leaf showing blistering, leaf distortion
FT                   and shoe string symptoms"
FT                   /collected_by="Basavaraj YB"
FT                   /collection_date="25-Jan-2011"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>725
FT                   /codon_start=1
FT                   /product="nuclear inclusion protein A"
FT                   /note="NIaPro"
FT                   /protein_id="AGE32250.1"
FT                   /translation="GKSLCQGMRNYNGIASVVCHLKNTSGKGKSLFGIGYNSFIITNRH
FT                   LFKENNGELIVKSQHGKFVVKNTTTLQIAPVGKTDLLIIRMPKDFPPFHSRARFRAMRA
FT                   GDKVCMIGVDYQENHIASKVSETSIISEGSGEFGCHWISTNDGDCGNPLVSVSDGFIVG
FT                   LHSLSTSTGDQNFFAKIPAQFEENVLRKIDNLTWSKHWSYNINELSWGALKVWESRPEA
FT                   IFNAQKEINQLNVFEQSGSR"
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SQ   Sequence 725 BP; 235 A; 123 C; 170 G; 197 T; 0 other;

kc155246 Length: 725  12-FEB-2013  Type: N  Check: 7563  ..

       1  ggaaaaagtc tttgtcaagg gatgagaaac tacaatggta tagcttctgt
      51  ggtttgccat ttgaaaaaca catcaggaaa aggaaagagt ctatttggaa
     101  tcggatataa ttcgttcatt atcacaaatc ggcatttgtt taaggaaaat
     151  aatggtgaac tcatagtgaa atcccaacat gggaaatttg tagtcaagaa
     201  caccacaaca ctccagattg ctccagttgg aaagactgat cttttaatta
     251  ttcggatgcc gaaagatttt cctccattcc atagcagggc taggtttaga
     301  gccatgagag ctggagacaa ggtttgcatg ataggtgtcg actatcaaga
     351  gaatcatatt gcgagtaaag tgtctgagac ttctatcatc agtgaaggct
     401  cgggagaatt tggatgtcac tggatatcca cgaatgacgg tgactgcggt
     451  aatccactag ttagtgtttc agatggtttc attgttggtc tgcatagtct
     501  gtcaacatca accggagatc aaaatttctt cgctaaaata cccgcacaat
     551  ttgaagaaaa tgtcctaagg aaaatcgata acttaacctg gagtaagcac
     601  tggagctaca atattaatga actgagttgg ggagctctaa aagtgtggga
     651  gagtcggccc gaagcaattt ttaacgcgca gaaagagatt aatcaattga
     701  atgttttcga acaaagcggt agtcg