Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate MP nuclear inclusion protein A gene, partial cds.

ACC No: KC155248

Dated: 2013-02-12 | Length: 725 | CRC: 1360351396

                
ID   KC155248; SV 1; linear; genomic RNA; STD; VRL; 725 BP.
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AC   KC155248;
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DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Papaya ringspot virus P isolate MP nuclear inclusion protein A gene,
DE   partial cds.
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KW   .
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OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
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RN   [2]
RP   1-725
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (11-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .725
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="MP"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Madya Pradesh"
FT                   /isolation_source="leaf showing blistering and leaf
FT                   distortion symptoms"
FT                   /collected_by="Basavaraj YB"
FT                   /collection_date="25-Jun-2012"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1. .>725
FT                   /codon_start=1
FT                   /product="nuclear inclusion protein A"
FT                   /note="NIaPro"
FT                   /protein_id="AGE32252.1"
FT                   /translation="GKSLCQGMRNYNGIASVVCHLKNTSGDGRSLFGVGYNSFIITNRH
FT                   LFKENNGELIVKSQHGKFVVKNTAMLRVAPVGKTDLLIIRMPKDFPPFHSRARFRAMKA
FT                   GDKVCMIGVDYQENHVASKVSETSIISEGTGEFGCHWISTNDGDCGNPLVSVSDGFIVG
FT                   LHSLSTSTGDQNFFAKIPEQFEEKFLRKIDDLNWSKHWSYNINELSWGALKVWQSRPEA
FT                   IFNAQKEISQLNVFEQSGSR"
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SQ   Sequence 725 BP; 232 A; 124 C; 175 G; 194 T; 0 other;

kc155248 Length: 725  12-FEB-2013  Type: N  Check: 1267  ..

       1  gggaagagcc tttgccaagg aatgagaaat tacaatggga tagcttctgt
      51  tgtttgccat ttgaaaaaca cgtcaggaga tggacgtagc ttatttggtg
     101  tcgggtacaa ttcattcatc attacaaatc gacatttatt caaggagaac
     151  aatggtgagc tcattgtcaa atcccaacac ggaaaatttg ttgttaagaa
     201  taccgcgatg cttcgggtag ctccagttgg caaaacagat cttttgatca
     251  tcagaatgcc aaaggatttc ccaccttttc atagcagagc aagatttaga
     301  gctatgaaag ctggggataa ggtttgcatg ataggcgttg attaccaaga
     351  aaaccacgtt gcaagtaagg tttctgaaac atcaattatc agtgagggca
     401  caggagagtt cgggtgtcac tggatatcaa caaatgatgg cgactgcggg
     451  aatccacttg ttagcgtttc agatggtttc attgttggct tgcatagttt
     501  gtcaacatca accggagatc aaaatttctt cgccaagata cccgaacaat
     551  ttgaggaaaa gttcttaaga aagattgatg atttgaactg gagtaaacac
     601  tggagctata atattaatga actgagttgg ggagcattaa aagtgtggca
     651  gagtcgacct gaagcaatct tcaacgcgca gaaagaaatt agtcaattga
     701  acgtattcga acaaagcggt agtcg