Sequence of DPV Euphorbia leaf curl virus
Euphorbia leaf curl virus isolate PF1, complete genome.
ACC No: KC161185
Dated: 2013-02-20 | Length: 2745 | CRC: -1881059148
ID KC161185; SV 1; circular; genomic DNA; STD; VRL; 2745 BP.
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AC KC161185;
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DT 20-FEB-2013 (Rel. 115, Created)
DT 20-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE Euphorbia leaf curl virus isolate PF1, complete genome.
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KW .
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OS Euphorbia leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2745
RA Cheng Y.H., Deng T.C., Chen C.C., Chiang C.H.;
RT "First report of Euphorbia leaf curl virus and Papaya leaf curl virus on
RT passion fruit in Taiwan";
RL Unpublished.
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RN [2]
RP 1-2745
RA Cheng Y.H., Deng T.C., Chen C.C., Chiang C.H.;
RT ;
RL Submitted (13-NOV-2012) to the INSDC.
RL Plant Pathology Division, Agricultural Research Institute, 189 Zhongzheng
RL Rd., Wufong, Taichung 41301, Taiwan
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CC ##Assembly-Data-START##
CC Assembly Method :: NTI v. 8
CC Assembly Name :: ContigExpress
CC Coverage :: 200
CC Sequencing Technology :: 454
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .2745
FT /organism="Euphorbia leaf curl virus"
FT /host="Passiflora edulis x Passiflora edulis f. flavicarpa"
FT /isolate="PF1"
FT /mol_type="genomic DNA"
FT /country="Taiwan"
FT /collected_by="Y. H. Cheng"
FT /collection_date="Mar-2011"
FT /identified_by="Y. H. Cheng"
FT /db_xref="taxon:270117"
FT CDS 145. .501
FT /codon_start=1
FT /product="V2"
FT /protein_id="AGF41098.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVADTYSPDTVGYNLIRDL
FT ICILRSRNYVEAQSRYNHFHPRLEGSTEAELRQSRIEPCLCPYCPRHQIKSMGQQAHEQ
FT EAQDVQDVQKSRCP"
FT CDS 305. .1075
FT /codon_start=1
FT /product="V1"
FT /protein_id="AGF41099.1"
FT /translation="MSKRKADIIISTPGSKVRRRLNFDSPGSSRAYVPTVRVTKSSLWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1072. .1476)
FT /codon_start=1
FT /product="C3"
FT /protein_id="AGF41102.1"
FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKILEHHNRPFLTNQDI
FT ITVQVQFNHNLRKALEIHKCFLAFRIWMTSQPPTGHFLTVVKTQVLKYLDNLGIISINN
FT VIRAVDHVLWNVLRHTVYVDQSYSIKFNIY"
FT CDS complement(1217. .1621)
FT /codon_start=1
FT /product="C2"
FT /protein_id="AGF41101.1"
FT /translation="MRSLSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA
FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDIRAPQPAIPDEPRHHHRPSTIQSQP
FT EESTGDSQMFPSLPNLDDLTASDWSFLNGR"
FT CDS complement(1524. .2603)
FT /codon_start=1
FT /product="C1"
FT /protein_id="AGF41100.1"
FT /translation="MPRAFKLNAKNYFLTYPKCSLTKEQALSQLENLQTPVNKKYIRVC
FT RELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEK
FT DGDTLDWGEFQIDGRSARGGQQTANDAYAAALNAGSKSDALRVIKELAPKDYVLQFHNL
FT NANLDRIFTPPVEVYVSPFSSSSFDQVPDELEEWAAENVVSAAARPLRPKSIVIEGDSR
FT TGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT NTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGTLYS
FT GSNQSAAQASQEGDQTSTC"
FT CDS complement(2162. .2452)
FT /codon_start=1
FT /product="C4"
FT /protein_id="AGF41103.1"
FT /translation="MGNLIFTCSSSSKGNTSAQITDSSTWYPQPGQHISIRTFRELNQA
FT RTSSPIWRRTETPSTGESFRSMEDLQEGVNRQPMMLTPQHLTPAVSQTLLG"
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SQ Sequence 2745 BP; 725 A; 547 C; 657 G; 816 T; 0 other;
kc161185 Length: 2745 20-FEB-2013 Type: N Check: 388 ..
1 accggatggc cgcgcaaagt gttaaagtgg tcccccctcc cctaactgac
51 aaagacatgt cggccaataa aaacgctccc tcaaagttaa attagtggtg
101 gtccctctat ttaaacttcc ttacgaagta gttcattccg cactatgtgg
151 gatccattag taaacgagtt tcccgaaacc gttcacggtt ttagatgtat
201 gttggcagtg aaatatctcc aattagttgc agatacgtat tccccagata
251 cggtgggata caatttaata cgtgatttaa tttgtattct acgttccagg
301 aattatgtcg aagcgcaaag cagatataat catttccacc ccaggctcga
351 aggttcgacg gaggctgaac ttcgacagtc caggatcgag ccgtgcttat
401 gtccctactg tccgcgtcac caaatcaagt ctatgggcca acaggcccat
451 gaacaggaag cccaggatgt acaggatgta cagaagtcca gatgtcccta
501 gaggatgtga aggcccgtgt aaggtccagt catttgagtc cagacatgat
551 atccagcaca ttggtaaagt catgtgtgtt agtgatgtta cccgtggtat
601 tgggctgacc cacagggttg gtaagaggtt ctgtgttaag tctgtttatg
651 tgctgggtaa gatctggatg gatgagaaca ttaagactaa gaatcatacg
701 aatagtgtta tgtttttcct tgttagggat cgacggcccg ttgataagcc
751 tcaagatttt ggtgaggttt ttaacatgtt tgataatgag cctagcacgg
801 cgactgtgaa gaatgttcat cgtgataggt accaggtact gaggaagtgg
851 catgcgactg tgacaggtgg tcagtatgca tcgaaggagc aagctctggt
901 gaagaagttt attagggtta ataattatgt tgtgtataac cagcaagaag
951 ctggcaagta tgaaaatcat acggagaatg cgttgatgtt gtatatggcc
1001 tgtacacatg ccagtaatcc tgtgtatgca actttgaaga tcagaatcta
1051 tttctatgat tctgttcaga attaataaat attgaatttt attgaataag
1101 attggtctac atatacagta tgtcgtaata cattccataa tacatgatca
1151 actgccctaa ttacattgtt aatactgata atgcctaaat tatctagata
1201 cttaagcact tgggtcttaa cgaccgttaa gaaatgacca gtcggaggct
1251 gtgaggtcat ccagattcgg aaggctagga aacatttgtg aatctccagt
1301 gctttcctca ggttgtgatt gaattgtact tggacggtga tgatgtcttg
1351 gttcgtcagg aatggccggt tgtggtgctc taatatcttg aaatataggg
1401 gattttgaat ctcccagata aacacgccat tctctgcttg agctgcagtg
1451 atgagttccc ctgtgcgtga atccatgatc gtggcaggct agtgctatga
1501 agtatgagca tccacaaggg agatcaacac gtcgacgtct ggtccccttc
1551 ttggctagcc tgtgctgcac tttgattgga acctgagtag agtgtgcctt
1601 ggagggtgac aaagatcgca ttctttaaag cccaattttt gagtgcggta
1651 tttttctctt cgtccaagaa ctctttatag ctagagttgg gtcctggatt
1701 gcagaggaag atagtgggaa ttccgccttt aatttgaact ggctttccgt
1751 atttcgtgtt gctttgccag tccctttggg cccccatgaa ttccttgaag
1801 tgctttaggt agtggggatc gacgtcatca atcacgttgt accaagcatc
1851 attattgtag accttaggac taaggtctaa gtgaccacac aggtaattat
1901 gtggacccaa agacctagcc cacatcgttt tccccgtacg actatcaccc
1951 tctatgacaa tacttttggg tctcaatggc cgcgcagcgg cactcaccac
2001 attctcagca gcccattctt ccagttcatc tggaacttgg tcaaaagaag
2051 aagaagagaa aggagaaaca taaacctcga ctgggggagt aaatatccta
2101 tctaaattag catttagatt atgaaattgt agtacataat ctttaggtgc
2151 taactcctta atcaccctaa gagcgtctga cttactgccg gcgttaagtg
2201 ctgcggcgta agcatcattg gctgtctgtt gaccccctct tgcagatctt
2251 ccatcgatct gaaactctcc ccagtcgagg gtgtctccgt ccttctccag
2301 ataggacttg acgtccgagc ttgatttagc tccctgaatg ttcggatgga
2351 aatgtgctga cctggttggg gataccaggt cgaagaatct gttatttgtg
2401 cactggtatt tcccttcgaa ctggatgagc acgtgaagat gaggttcccc
2451 attttcgtga agttccctgc agactcttat gtattttttg tttactgggg
2501 tttgtaagtt ttctaattgt gagagggctt gttctttggt tagagagcat
2551 ttgggatagg tgaggaaata gttttttgca ttcaatttaa aagcacgtgg
2601 cattttggca atcggtgtac aagataattc tatggcaatc ggtgtattgg
2651 ggtacaatat ataggtgtac accaaatggc attattgtaa tttgagaaag
2701 aaattcaaaa gatacacgct ccaaagcggc catccgtcta atatt