Sequence of DPV Rice stripe virus

Rice stripe virus isolate V12 NS3 protein gene, complete cds.

ACC No: KC197058

Dated: 2013-03-03 | Length: 636 | CRC: -677636213

                
ID   KC197058; SV 1; linear; genomic RNA; STD; VRL; 636 BP.
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AC   KC197058;
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DT   03-MAR-2013 (Rel. 116, Created)
DT   03-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice stripe virus isolate V12 NS3 protein gene, complete cds.
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-636
RA   Ren C.M., Cheng Z.B., Miao Q., Fan Y.J., Zhou Y.J.;
RT   "First report of rice stripe virus in Vietnam";
RL   Unpublished.
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RN   [2]
RP   1-636
RA   Ren C.M., Cheng Z.B., Miao Q., Fan Y.J., Zhou Y.J.;
RT   ;
RL   Submitted (22-NOV-2012) to the INSDC.
RL   Jiangsu Academy of Agricultural Sciences, Institute of Plant Protection,
RL   Zhonglingjie Street 50, Nanjing, Jiangsu 210014, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .636
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="rice"
FT                   /isolate="V12"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam"
FT                   /collection_date="Jun-2012"
FT                   /db_xref="taxon:12331"
FT   CDS             1. .636
FT                   /codon_start=1
FT                   /product="NS3 protein"
FT                   /note="putative replication protein; putative suppressor of
FT                   gene silencing"
FT                   /protein_id="AGG18264.1"
FT                   /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
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SQ   Sequence 636 BP; 171 A; 146 C; 124 G; 195 T; 0 other;

kc197058 Length: 636  03-MAR-2013  Type: N  Check: 671  ..

       1  atgaacgtgt tcacatcgtc tgtaggttct gtggaatttg atcatcctct
      51  gcttttggag aatgatctga ccagtttgag cataaactgt gatgatgtcc
     101  attgttcttc aagagcctta tgttatatat atgacattca ttcatctagg
     151  cacccttcca ttgatgagca tcagtttctg aggcttcttc atggccctga
     201  tgatgctgtc actctaggct ccttcttgaa gactctgatc tggattctgt
     251  cccatgataa gaatctccca gaagagtaca gacttcctac tataatgatg
     301  tcatcctcat atgtgaagtt cttcactgaa gtgaagccaa gacccccatc
     351  aacaaattgc tggacatgca gaatgtccaa agacaatttg ccctttaccg
     401  ttcctagtgt caagggattt cctccagatg cagagctcta cattgtgcca
     451  atatctgacc atgatggaaa gcctgtcaaa tttgacaata ggaagactct
     501  atatagatca cctagtaaga aaaggcataa gtatgtcatt tcttccgata
     551  aaccacctct tagtgcacgt tatgttaagt acgttgattc tagtgcacta
     601  gaaccctcac caggcagctc tccagctgtg ctgtag