Sequence of DPV Tomato leaf curl New Delhi virus

Tomato leaf curl New Delhi virus isolate India:UP:Bahraich:Tomato2:2011 coat protein (AV1) gene, complete cds.

ACC No: KC207819

Dated: 2013-03-17 | Length: 771 | CRC: -1942434515

                
ID   KC207819; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   KC207819;
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DT   17-MAR-2013 (Rel. 116, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Tomato leaf curl New Delhi virus isolate India:UP:Bahraich:Tomato2:2011
DE   coat protein (AV1) gene, complete cds.
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KW   .
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OS   Tomato leaf curl New Delhi virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RA   Khan M.S., Ji S.H., Tiwari A.K., Chun S.C.;
RT   ;
RL   Submitted (26-NOV-2012) to the INSDC.
RL   Molecular Biotechnology, Konkuk University, 1 Hwayang-dong Kwangjin-gu,
RL   Seoul, Seoul 143701, South Korea
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Tomato leaf curl New Delhi virus"
FT                   /host="tomato"
FT                   /isolate="India:UP:Bahraich:Tomato2:2011"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf"
FT                   /collected_by="M.S. Khan"
FT                   /collection_date="Feb-2011"
FT                   /db_xref="taxon:223347"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="involved in encapsidation of viral nucleic acid"
FT                   /protein_id="AGH07937.1"
FT                   /translation="MAKRPADIIIQRPHRKYADVSTFDSPYGARAVVPIARVTKAKAWI
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKGQSFESRHDVSHIGKVMCVSDVTRGAGLTHR
FT                   VGKRFCVKSVYLLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGTYACKEQGLVRKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHPSNPGYATLKIRIYFYDSVTN"
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SQ   Sequence 771 BP; 228 A; 159 C; 186 G; 198 T; 0 other;

kc207819 Length: 771  17-MAR-2013  Type: N  Check: 295  ..

       1  atggcgaagc gaccagcaga tatcatcatt caacgcccgc atcgcaagta
      51  cgccgacgtc tcaactttcg acagccccta tggagctcgt gcagttgtcc
     101  ccattgcccg cgtcacaaaa gcaaaggcct ggatcaacag gccgatgaac
     151  agaaaaccca gaatgtacag aatgtataga agtcccgacg tgccaagagg
     201  ctgtgaaggc ccttgtaagg ggcagtcctt tgaatctagg cacgatgtct
     251  ctcatattgg caaagtcatg tgtgttagtg atgttacccg aggagctgga
     301  ctcacacatc gcgtagggaa gcgattttgt gtgaaatctg tctatttgct
     351  ggggaagata tggatggatg aaaacatcaa gacaaaaaac catactaaca
     401  gtgtcatgtt tttcttggtc cgtgaccgtc gtcctacagg atctcctcaa
     451  gattttgggg aagtttttaa tatgtttgac aatgaaccga gcacagcaac
     501  tgtgaagaac atgcatcgtg atcgttatca agtcttacgc aagtggcatg
     551  cgactgtgac gggaggaaca tatgcatgta aggagcaagg actagttagg
     601  aagtttgtta gggttaataa ttatgttgtt tataatcaac aagaggccgg
     651  caagtatgag aatcatactg aaaacgcatt aatgttgtat atggcctgta
     701  ctcacccatc aaatcctgga tatgctactt tgaaaatccg gatctatttc
     751  tatgattcgg taacaaatta a