Sequence of DPV Tomato yellow leaf curl China virus

Tomato yellow leaf curl China virus isolate SC327-39 AV2 gene, complete cds; and AV1 gene, partial cds.

ACC No: KC456666

Dated: 2013-04-15 | Length: 520 | CRC: 2118361556

                
ID   KC456666; SV 1; linear; genomic DNA; STD; VRL; 520 BP.
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AC   KC456666;
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DT   15-APR-2013 (Rel. 116, Created)
DT   15-APR-2013 (Rel. 116, Last updated, Version 1)
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DE   Tomato yellow leaf curl China virus isolate SC327-39 AV2 gene, complete
DE   cds; and AV1 gene, partial cds.
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KW   .
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OS   Tomato yellow leaf curl China virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-520
RA   Yu Y., Ruan T., Bao L., Qing L.;
RT   ;
RL   Submitted (04-JAN-2013) to the INSDC.
RL   College of Plant Protection, Southwest University, Tiansheng Road, No. 2,
RL   Beibei District, Chongqing, Chongqing 400716, China
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: Lasergene v. version 7.0
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .520
FT                   /organism="Tomato yellow leaf curl China virus"
FT                   /host="Malvastrum coromandelianum"
FT                   /isolate="SC327-39"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Sichuan"
FT                   /collection_date="11-Dec-2010"
FT                   /PCR_primers="fwd_name: pa, fwd_seq: taatattacckgwkgvccsc,
FT                   rev_name: pb, rev_seq: tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:185793"
FT   CDS             137. .484
FT                   /codon_start=1
FT                   /product="AV2"
FT                   /protein_id="AGI96367.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL
FT                   ILVIRARDYVEASRRYSHFHSRLQGASPSELRQPLLNPCSCPHCPRHQKTYMEQQAHES
FT                   KAHDVPDVQKP"
FT   CDS             297. .>520
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /protein_id="AGI96368.1"
FT                   /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAAVPTVRVTRRHIWN
FT                   NRPMNRKPMMYRMYRSPDVPKGCEGPCKV"
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SQ   Sequence 520 BP; 132 A; 137 C; 113 G; 138 T; 0 other;

kc456666 Length: 520  15-APR-2013  Type: N  Check: 7652  ..

       1  taatattacc tgtgggccgc gcgatttttt ttaaagtggt ccccgcattc
      51  gcgtatgtcc aatcatggcc gctcctcaaa gcttaattat taaatggtcc
     101  cctatataac ttaggcccta agtatttacg ttaaacatgt gggatccttt
     151  actcaacgag ttcccggata ctgtacacgg gttcaggtgt atgcttgcaa
     201  taaaatacct gcagcttgta gaaaatacgt attctcccga tacgttggga
     251  tacgatctaa tacgcgatct catacttgtt atacgtgcga gggattatgt
     301  cgaagcgtcc cgccgatata gtcatttcca ctcccgcctc caaggtgcgt
     351  cgccgtctga acttcgacag cccttactca acccgtgcag ctgtccccac
     401  tgtccgcgtc accagaagac atatatggaa caacaggccc atgaatcgaa
     451  agcccatgat gtaccggatg tacagaagcc ctgatgttcc gaagggttgt
     501  gaaggcccat gcaaagtcca