Sequence of DPV Broad bean wilt virus 2
Broad bean wilt virus 2 isolate BB9 segment RNA1, complete sequence.
ACC No: KC625494
Dated: 2013-05-29 | Length: 5953 | CRC: -804581831
ID KC625494; SV 1; linear; genomic RNA; STD; VRL; 5953 BP.
XX
AC KC625494;
XX
DT 29-MAY-2013 (Rel. 116, Created)
DT 29-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE Broad bean wilt virus 2 isolate BB9 segment RNA1, complete sequence.
XX
KW .
XX
OS Broad bean wilt virus 2
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales;
OC Secoviridae; Comovirinae; Fabavirus.
XX
RN [1]
RP 1-5953
RA Kwak H.R., Lee Y.J., Seo J.K., Kim M.K., Choi H.S.;
RT "Molecular characterization of Broad bean wilt virus 2(BBWV2) isolates from
RT Korea";
RL Unpublished.
XX
RN [2]
RP 1-5953
RA Kwak H.R., Lee Y.J., Seo J.K., Kim M.K., Choi H.S.;
RT ;
RL Submitted (17-FEB-2013) to the INSDC.
RL Crop Protection, National Academy of Agricultural Science, RDA, Suin-ro
RL 126th, Gwonseon-gu, Suwon, Gyeonggi-do 441-707, Republic of Korea
XX
CC GenBank Accession Numbers KC625494, KC625508 represent sequences
CC from the 2 segments of Broad bean wilt virus 2 BB9.
XX
FH Key Location/Qualifiers
FH
FT source 1. .5953
FT /organism="Broad bean wilt virus 2"
FT /segment="RNA1"
FT /host="Vicia faba"
FT /isolate="BB9"
FT /mol_type="genomic RNA"
FT /country="South Korea"
FT /collection_date="2006"
FT /db_xref="taxon:76875"
FT CDS 230. .5839
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AGM38161.1"
FT /translation="MDFSMMQMVVGFLKTSMGLQSIKDIVEKACVAKKDKTLLHIHLCF
FT FHAIEMARDFNEGMDMGQIQSSAAIKYRAAVLKRHVVMNVETGRYDRARMMQYNNETCV
FT NWFSCEIVEEKAKKVLDEEEAQEDNIVDNFLKSCAISEEVGQTSGEGAEHYAFGQGLYE
FT YATRISDAIVAVISGSIKKSIDDFLDKVYAVMAQVFAAWMPRIRAAFQWFENIKEVIKR
FT WANSMHEKINFILVGMEDCLYMGAGLVAATCIVTLLEKFMIAIGILTKPCGAATLFLTT
FT AMAAISATYVCGKALEKSAMLTNLLLFVTTNCRVVLDTLFNHELGRQEQEMSQNDGKAP
FT TGFGQFGVSTMLQDVANLVSTWSTSSVTEIGKTFGAISQIKNGILALRDMVYFVFEKLS
FT ELAHRVLGFESQVLADLSILLGENVADWLCECDCMVAYMLEFNSRNREIFDRLSQLIEK
FT GRMIRTGVLRSSHRGSSQVMSLVTKALEKLIELHNSVVMAGSNTTRKSPFMVFFTGASG
FT TGKTSVVQRVAINWLQEEQLGTSEIYARNGQDPFWSGYKRHAVVTYDDFGAVPGATSNE
FT AEIINVISRNPYATVMAGLAEKGMYFDSRLVLASSNFLAANPESGVHDSEAYERRRHAV
FT VRVSLKPGVPYNANDPCANQTYTLLESKTPFNEIQVFETYAELWSFLYTRFKEHEEQEE
FT LYLKSLPILDSDKKEALEGLVGLTVIATSFAPKAVMQFGAEKFPGYHFLISDGEYCYFW
FT HGDGSVEFVSVEKMKLGKQDIIQLKQQGLSTAMMYKDLAKAFPTLNSLAVLYAKNIVVK
FT RWIGADLEPTKSCEDVYMREQIGNLPKWQRAYLHVLSKYLTVQSPRGWFMECLEEAKRN
FT LRATYLWEYKQWPLPLKLALGSLIAIMAGGAIWYSLQSLWCVSGDASFIAGAATVFSVS
FT SFAGQSDVPNRDNSERSFRNRKIRARTWQGQSSCFGDSALWIAETCMATLTFSNVRTQV
FT CLAPGRGFFGVNHCLAAIPAGVMVKLDSSIGVTYFVWEKEKLTQFEGNEIALYMTSTMP
FT KTVDSLSSRIHFDAETLPKTFNAVSFSYKYDPVIQQMVPELGSITCKIHNKAFTLAHGE
FT YRREIPQSLTYEASTVAGDCGSLILAEIEGKFKLVGMHVAFNGEEGSASFMPYHASLDQ
FT KVGQGDFVLKYQEWAEPKILGPGCRAMGLIDPEHALAASGKTTFVETPEEWHLNYPCDK
FT LPSILARGDPRLAGTVHADYDPFAAGMSKYAKEAGPFDASSLKQVCLGITEVWEDASAD
FT FPMDEVDLDTAINGLENVEFFDALVLGTSEGFPYRLDRGPGEKGKSRYVSGESGNFKIT
FT DEGVLSDINWFEETSKTQVPDLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIR
FT KKFLNFVRFFMKRRDVLPAQVGVNPYSREWTRIANKLLNKGNNILCCDYSRFDGFLPKC
FT IMNEIGDMIARVMRANDESKTQIKNLMLACTSRYAMCNRILYRVENGIPSGFPLTVIVN
FT SILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVKF
FT MEELGIKVTDGIDKTKIGIEFRRLENCDFLKRPFKLNPDGTWRSPMSKESLWPQLHYVK
FT AKKLEMAEAYINNCNNILRELWLHDVTEAKEFRNRVLRNLKWIGHEQLLNMQQLAVFHS
FT EQMNGISDFLSTCVTVDSISLMDPLVPGLLPVKTCEVIPRIFVAAEKHFEGNFEDFFTV
FT SITTSRKFKEDKGFVLLFPYGAGRGGLPTTQFMKENVVRKGCSIQKKFRQAYERGEKIL
FT FISQSSVVPAYVFAVMLLHSIGAISRLTSNKALTQAMQTCKKLEYLPKEYEDFF"
FT mat_peptide 230. .1288
FT /product="protease cofactor"
FT mat_peptide 1289. .3034
FT /product="NTP-binding protein"
FT mat_peptide 3035. .3112
FT /product="viral genome-linked protein"
FT mat_peptide 3113. .3739
FT /product="protease"
FT mat_peptide 3740. .5836
FT /product="RNA-dependent RNA polymerase"
XX
SQ Sequence 5953 BP; 1698 A; 1008 C; 1518 G; 1729 T; 0 other;
kc625494 Length: 5953 29-MAY-2013 Type: N Check: 7093 ..
1 tgttttaata aaatattaaa acaaacagct ttcgttccga aaacagcttt
51 cagttactaa acagctttcg ctgcgattaa acagctttca aacaaacagc
101 tttcatttca tttaattgtt cttggcttgt gtggcttcgg aaagaacctg
151 gaaaaaggga gtgtgattaa aagcgcacca tatatttcga agatcatttt
201 gaatttcatt ttgctacctt aattttaaga tggatttcag catgatgcaa
251 atggttgtgg gttttctcaa gacttcaatg ggtttacaat ccattaagga
301 cattgtggaa aaagcatgtg tggcaaaaaa ggacaagacc ttgctccaca
351 ttcatttatg ctttttccat gccattgaga tggctcggga ttttaatgaa
401 ggtatggata tggggcagat acaaagttct gctgcaatca aataccgagc
451 tgcagtgtta aagcgccatg ttgtcatgaa tgtggagacg ggaagatacg
501 atcgtgcacg catgatgcag tataacaatg agacatgtgt taactggttc
551 tcatgcgaga tcgttgaaga gaaggctaaa aaagtacttg acgaagagga
601 ggcgcaagag gacaacattg ttgataattt tcttaagagc tgtgcgatct
651 ctgaggaggt tggtcagaca tcaggagaag gtgctgagca ctatgctttt
701 ggccagggtt tgtatgagta tgccactcgt attagtgatg caatagtggc
751 agtgatttca ggctctatta aaaagagtat agatgatttt ctggacaagg
801 tgtatgcagt tatggcgcag gtttttgcgg cttggatgcc tagaattaga
851 gccgcatttc agtggttcga aaacatcaaa gaagtcatta agagatgggc
901 caattcgatg catgaaaaaa tcaatttcat tctagttggc atggaagatt
951 gtttgtacat gggtgctggg cttgtggcgg ccacttgcat tgtcacattg
1001 cttgagaaat ttatgatagc cattggaatt ttaaccaagc cttgtggggc
1051 ggcaactctt tttttaacaa ctgcaatggc ggctatttca gccacatatg
1101 tgtgtggaaa agctttggaa aaatcagcta tgctcacaaa tttgttactt
1151 tttgtgacta ccaactgccg agttgtgttg gatactctat tcaatcacga
1201 attgggaagg caggagcaag agatgagcca aaatgatgga aaagccccga
1251 caggttttgg tcagtttgga gtttcaacaa tgctacaaga cgtagccaat
1301 ttagtttcga cgtggtcaac aagctcggtc acagaaattg ggaaaacatt
1351 tggagccatt tcacagatta aaaatggaat tttagcttta agggatatgg
1401 tgtactttgt gtttgaaaaa ttgagtgaat tggctcatag agtgcttgga
1451 tttgaatctc aagtattggc tgatttgtca attttgcttg gagagaatgt
1501 ggcagattgg ttatgtgaat gtgattgtat ggtggcttac atgcttgagt
1551 ttaactccag aaatagagag atttttgata gattgtctca gctgatagag
1601 aaaggcagaa tgataagaac aggagttttg cgctcaagtc atcgtgggtc
1651 atcacaggtc atgtcacttg ttactaaggc tttggagaag ttgatagagt
1701 tgcataactc agttgtgatg gcaggttcga atacaaccag aaagtctccc
1751 tttatggttt ttttcacagg tgcctctggc acagggaaaa cttcagttgt
1801 tcaaagagtt gccataaatt ggctgcagga agaacagctt gggacgagtg
1851 aaatatacgc tcgcaatggg caggatcctt tttggtctgg ctacaaaaga
1901 catgcggttg tcacgtatga tgatttcggg gccgttccag gcgcaacttc
1951 aaatgaggct gaaattatca acgtcatttc aagaaaccca tatgcaacag
2001 tgatggcagg cttggcggaa aaagggatgt atttcgactc aagattggtt
2051 ttggctagca gcaattttct tgcagccaac ccagagtcag gagttcatga
2101 ttcagaggcg tatgagagac gaaggcacgc agtggtaaga gtttcattga
2151 aaccaggagt tccttacaat gccaatgatc cgtgcgccaa tcaaacttac
2201 accttattag agtccaaaac gcctttcaat gaaattcaag tctttgagac
2251 atatgcggaa ctttggtctt ttttgtacac gaggtttaag gagcatgaag
2301 agcaagagga gttgtatcta aagtccttgc caatattgga ctcagataaa
2351 aaggaagctt tggagggctt agtgggtctc acggtcatag ccacttcatt
2401 tgctccaaaa gcagttatgc aatttggagc agagaagttt ccgggatacc
2451 actttctcat ctcggatggt gagtattgct atttttggca tggagatggg
2501 tcggtggagt ttgttagtgt agaaaagatg aaattgggca agcaagatat
2551 aattcagttg aagcagcaag gattgtccac ggctatgatg tataaggatc
2601 tggctaaggc ttttcccact ttgaattcat tagctgtatt gtatgccaaa
2651 aacattgtgg taaagcgctg gattggtgca gatttggagc ccacaaagag
2701 ctgtgaagat gtatacatgc gagagcaaat aggcaatttg cccaaatggc
2751 agagggcgta tttgcacgtg cttagcaagt atttgacagt tcagagccct
2801 cgaggatggt ttatggagtg cttagaagaa gcaaagagga atttgcgagc
2851 tacatacttg tgggaataca aacaatggcc attgcctttg aaattggcat
2901 tgggctcatt aattgccatc atggcgggtg gagctatttg gtactcacta
2951 cagtctttat ggtgtgtgtc tggggacgct tcttttatag cgggagcagc
3001 gacggttttt tctgtttctt cttttgctgg gcaaagtgat gtgcctaacc
3051 gggacaattc agaaaggtca tttagaaaca ggaagatccg tgctagaaca
3101 tggcaaggcc agagttcgtg ctttggagac tcggcacttt ggattgcaga
3151 aacttgtatg gcaacattga ccttttcaaa tgtgagaaca caagtgtgct
3201 tggcacctgg gagaggtttc tttggagtga accattgcct tgctgctatt
3251 cccgcaggtg tgatggtcaa gctggattcg agcataggag taacttattt
3301 tgtgtgggag aaggaaaaat tgacacagtt tgagggcaat gaaatagcat
3351 tgtatatgac gagcacaatg cccaaaaccg tggattctct ttcgagtaga
3401 attcattttg atgctgaaac tctgcccaag actttcaatg cagtttcctt
3451 ttcctacaag tatgatccag tcatccagca aatggtgcct gaattgggaa
3501 gcatcacgtg taagattcac aacaaagctt tcacattggc acatggagag
3551 tataggcggg aaattcccca gagcctcacg tacgaggcaa gcactgtggc
3601 tggagattgc ggctctttaa tattggcgga aatcgaaggg aaattcaagc
3651 ttgtgggtat gcatgtggca tttaatggcg aggaaggaag tgcaagtttt
3701 atgccgtacc atgcttcttt ggatcaaaaa gtgggtcaag gagactttgt
3751 gttgaagtac caagaatggg ctgagccaaa gattttgggt ccgggttgca
3801 gggcaatggg actaatagat ccagaacacg ctttggcagc tagcgggaag
3851 acaacatttg ttgaaacccc tgaggaatgg catttgaact acccatgcga
3901 caaacttcct agtattttgg caaggggtga tcctagattg gcaggcacag
3951 ttcatgctga ctatgatcca tttgccgcag gcatgagcaa atatgcaaaa
4001 gaggcaggac cttttgatgc tagcagcttg aaacaggtgt gcttgggaat
4051 aaccgaagta tgggaggatg cttctgctga ttttccaatg gatgaagttg
4101 atttggatac tgctatcaat ggcttggaaa acgtcgagtt ttttgatgcc
4151 ttggttttag gaacttctga gggatttcct tatcgcctag atcgtggtcc
4201 tggtgagaag ggaaagagca gatatgtgtc tggtgagagt ggaaatttta
4251 aaatcactga tgaaggcgtg ctctcggaca ttaattggtt cgaggagaca
4301 agtaagacac aggtgcctga cctctattgc attgaatgcg tcaaggatga
4351 acgcttgcca attaggaaag tgctgcatga gcccaaaagt cggttgttca
4401 ctgtgcttcc aatgtcatac aacatagcca ttaggaaaaa gtttttgaac
4451 tttgtcagat ttttcatgaa aaggagggat gttttaccag ctcaagttgg
4501 tgtcaatccc tattctcggg agtggactcg aatagccaat aagttgttga
4551 ataaaggtaa caacattttg tgttgtgatt acagcaggtt tgacggcttt
4601 ttgcccaagt gtatcatgaa tgagattggg gatatgatag ccagggttat
4651 gcgggcaaat gatgagtcca aaactcaaat caagaacctc atgcttgcat
4701 gcaccagtcg gtatgccatg tgcaaccgaa ttttgtacag agttgagaat
4751 ggtattcctt ctggctttcc gcttactgtc attgtgaatt ccatcttgaa
4801 tgagatcttg gttaaatatg cgtattggca ttgctttgcg gacaatccaa
4851 ccgttcagag taattttgat gcgcatgtct ccatggtggt atacggtgat
4901 gacaatttaa tatcagtgtc ggatgcaata agctcaaagt ttgatggaaa
4951 tttccttgtg aaatttatgg aagaacttgg aattaaggtg actgatggaa
5001 ttgacaaaac aaagattgga atagagtttc gtcgcctgga aaattgtgat
5051 tttttgaaac gccctttcaa attgaatcca gatggcacat ggcgcagccc
5101 tatgtctaag gagagcttgt ggccacagct gcactatgtg aaggcaaaaa
5151 agttggaaat ggctgaggct tacataaaca attgcaataa catcttgcgc
5201 gagctgtggt tgcatgatgt tacagaggcc aaggaattcc gcaatagagt
5251 gctgagaaat ttgaaatgga ttggccatga gcaattgctc aacatgcaac
5301 aattggcagt atttcatagt gagcaaatga atggaataag cgatttttta
5351 tccacttgtg ttacagtcga tagcatttca ttaatggacc ccctggttcc
5401 aggtttgcta ccggtcaaga cttgtgaagt gattcctcga atctttgtgg
5451 cggcggaaaa acactttgaa ggaaatttcg aggatttctt tacagtatcc
5501 ataactacaa gtcgcaaatt caaggaggat aagggttttg ttcttctgtt
5551 cccatatgga gcaggcagag gtggattgcc gacgacacaa ttcatgaaag
5601 agaatgtggt aaggaaaggg tgttccatac agaagaaatt taggcaggca
5651 tatgagagag gagagaaaat tttgtttatc tcgcagagct cagtggttcc
5701 agcttacgtg tttgctgtta tgttgcttca ctcaattggg gcaatttcca
5751 ggctgacgag caataaagca ctcacacaag caatgcaaac ttgtaaaaaa
5801 ctggagtatt tgcctaaaga gtatgaagat ttcttttgaa tttaatttta
5851 ttttgttgtg tgtgtatttt agttattaat cactacttat attgtataat
5901 atgtattatg cagggttgaa gtgcctttcc caagtaaatt tcagtagtga
5951 ggg