Sequence of DPV Rice stripe virus

Rice stripe virus isolate Goseong nucleocapsid protein gene, complete cds.

ACC No: KC756858

Dated: 2013-06-27 | Length: 969 | CRC: 320471225

                
ID   KC756858; SV 1; linear; genomic RNA; STD; VRL; 969 BP.
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AC   KC756858;
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DT   27-JUN-2013 (Rel. 117, Created)
DT   27-JUN-2013 (Rel. 117, Last updated, Version 1)
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DE   Rice stripe virus isolate Goseong nucleocapsid protein gene, complete cds.
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KW   .
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-969
RA   Cho S.-Y., Yoon Y.-N., Kang I.J., Shin D.B., Kang H.-W., Lee B.C.;
RT   ;
RL   Submitted (08-MAR-2013) to the INSDC.
RL   Crop Environment Research, National Institute of Crop Science, Rural
RL   Development Administration, 125, Seodun-Dong Gwonseon-Gu Suwon Gyeonggi-Do,
RL   Suwon 441-857, Republic of Korea
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FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /organism="Rice stripe virus"
FT                   /segment="RNA3"
FT                   /host="rice"
FT                   /isolate="Goseong"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12331"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AGO05934.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
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SQ   Sequence 969 BP; 228 A; 253 C; 197 G; 291 T; 0 other;

kc756858 Length: 969  27-JUN-2013  Type: N  Check: 7667  ..

       1  ctagtcatct gcaccttctg cctcgtcctc gaagaactcc ttcaccaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttggtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtctcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgtccccact gaggacacta
     651  tcccatacct cgacaccaaa gtcgaagcct ctgtgcttcc agccgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtacctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcccgc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcagatca gctagagtgg
     951  ctggcttgtt ggtgcccat