Sequence of DPV Cauliflower mosaic virus
Cauliflower mosaic virus major inclusion body protein (VI) gene, complete cds.
ACC No: L09053
Dated: 2000-03-04 | Length: 3036 | CRC: -2086589890
!!NA_SEQUENCE 1.0
ID MCAMIBP standard; DNA; VRL; 3036 BP.
XX
AC L09053;
XX
SV L09053.1
XX
DT 26-JAN-1993 (Rel. 34, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE Cauliflower mosaic virus major inclusion body protein (VI) gene, complete
DE cds.
XX
KW major inclusion body protein.
XX
OS Cauliflower mosaic virus
OC Viruses; Retroid viruses; Caulimovirus.
XX
RN [1]
RP 1-3036
RX MEDLINE; 93383405.
RA Wintermantel W.M., Anderson E.J., Schoelz J.E.;
RT "Identification of domains within gene VI of cauliflower mosaic virus that
RT influnece systemic infection of Nicotiana bigelovii in a light-dependent
RT manner";
RL Virology 196:789-798(1993).
XX
DR SWISS-PROT; Q05651; IBMP_CAMVW.
DR TRANSFAC; R01914; CAMV$35SR_02.
DR TRANSFAC; R01915; CAMV$35SR_03.
DR TRANSFAC; R01918; CAMV$35SR_04.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3036
FT /db_xref="taxon:10641"
FT /organism="Cauliflower mosaic virus"
FT /strain="W260"
FT TATA_signal 753. .760
FT /evidence=EXPERIMENTAL
FT /note="TATA Box of 19S promoter"
FT mRNA 786. .2660
FT /evidence=EXPERIMENTAL
FT /standard_name="19S RNA"
FT /gene="VI"
FT CDS 798. .2360
FT /codon_start=1
FT /db_xref="SWISS-PROT:Q05651"
FT /evidence=EXPERIMENTAL
FT /function="post-transcriptional transactivation/host
FT specificity"
FT /product="major inclusion body protein"
FT /gene="VI"
FT /protein_id="AAA46360.1"
FT /translation="MENIEKLLMQEKILMLELDLVRAKISLARANGSSQQGDLPLHRET
FT PVKEEAVHSALATFTPSQVKAIPEQTAPGKESTNPLMASILPKDMNPVQTGMRLTVPGD
FT FLRPHQGIPIPRKSELSSTVAPLRAESGIQHPHINYYVVYNGPHAGIYDDWGCTKAATN
FT GVPGVAHKKFATITEARAAADAYTTSQQTDRLNFIPKGEAQLKPKSFAKALTSPPKQKA
FT HWLTLGTKKPSSDPAPKEISFDPEITMDDFLYLYDLVRKFDGEGDDTMFTTDNEKISLF
FT NFRKNANPQMVREAYAAGLIKTIYPSNNLQEIKYLPKKVKDAVKRFRTNCIKNTEKDIF
FT LKIRSTIPVWTIQGLLHKPRQVIEIGVSKKLVPTESKAMESKIQIEDLTELAVKTGEQF
FT IQSLLRLNDKKKIFVNMVEHDTLIYSKNIKETVSEDQRAIETFQQRVISGNLLGFHCPA
FT ICHFIVKIVEKEGGTYQCHHCDKGKAIVKDASADSGPKDGPPPTRSIVEKEDVPTTSSK
FT QVD"
FT TATA_signal 2426. .2432
FT /evidence=EXPERIMENTAL
FT /note="TATA Box of 35S promoter"
FT /gene="VI"
FT mRNA 2457. .2660
FT /evidence=EXPERIMENTAL
FT /function="viral replication and transcript for genes I
FT through V"
FT /standard_name="35S RNA"
FT /gene="VI"
XX
SQ Sequence 3036 BP; 1053 A; 676 C; 613 G; 694 T; 0 other;
L09053 Length: 3036 December 21, 2001 15:46 Type: N Check: 6102 ..
1 tctagaaata gatgaaggaa cacataagcc tcaaggacat atcttggaac
51 acatcaacaa attcccagat acccttgaag acaagaagca acttcagaga
101 ttcttaggca tactaacata tgcctcggat tatatcccga agctagctca
151 aatcagaaag cctctgcaag ccaagcttaa ggagaacgtt ccatggaaat
201 ggacgaaaga ggacaccctc tacatgcaaa aggtgaagaa aaatctgcaa
251 ggatttcctc cactacatca tcccttacca gaagagaagc tgatcatcga
301 gaccgacgca tcagacgact actggggagg tatgttaaaa gctatcaaaa
351 ttaacgaagg tactaatact gagttaattt gcagatacgc atctggaagc
401 tttaaagctg cagaaaagaa ttaccacagc aatgacaaag aaacattggc
451 ggtaataaat actataaaga aattcagtat ttatctaact cctgttcatt
501 tcttaatcag gacagataat acgcatttca agagttttgt taaccttaat
551 tacaaaggtg attcaaaact tggaagaaac atcagatggc aagcatggct
601 tagccactat tcatttgatg ttgaacacat taaaggaacc gacaaccact
651 ttgcggactt cctttcaaga gaattcaata aggttaattc ctaattgaaa
701 tccgaagata agattcccac acacttgtgg ctgatatcaa aaggctactg
751 cctatataaa cacatctctg gagactgaga aaatcagacc tccaagcatg
801 gagaacatag aaaaactcct catgcaagag aaaatactaa tgctagagct
851 cgatctagta agagcaaaaa taagcttagc aagagctaac ggctcttcgc
901 aacaaggaga cctccctctc caccgtgaaa caccggtaaa agaagaagca
951 gttcactctg cactggctac ttttacgcca tctcaagtaa aagctattcc
1001 agagcaaacg gctcctggta aagaatcaac aaatccgttg atggctagta
1051 tcttgccaaa agatatgaac ccagttcaga ctgggatgag gcttacagtg
1101 ccaggggact ttttacgtcc tcatcaggga attccaatcc cacgaaaatc
1151 tgagcttagc agcacagttg ctcctctcag ggcagaatcg ggtattcaac
1201 accctcatat caactactac gttgtgtata acggtccaca cgccggtata
1251 tacgatgact ggggttgtac aaaggcggca acaaacggtg ttcccggagt
1301 tgcacataag aagtttgcca ctattacaga ggcaagagca gcagctgacg
1351 catatacaac aagtcagcaa acagataggt tgaacttcat ccccaaagga
1401 gaagctcaac tcaagcccaa aagctttgcc aaggctctca ccagcccacc
1451 aaagcaaaaa gcccactggc tcacgctagg aaccaaaaag cccagcagtg
1501 atccagcccc aaaagagatc tccttcgacc cggagatcac aatggacgac
1551 ttcctctatc tctatgatct agtcaggaag ttcgacggag aaggtgacga
1601 taccatgttc accactgata atgagaagat tagcctcttc aatttcagaa
1651 agaacgctaa cccacagatg gttagagagg cctacgcagc aggtctcatc
1701 aagacgatct acccgagcaa taatctccag gagatcaaat accttcccaa
1751 gaaggttaaa gatgcagtca aaagattcag gactaactgc atcaagaaca
1801 cagagaaaga tatatttctc aagatcagaa gtactattcc agtatggacg
1851 attcaaggct tgcttcataa accaagacaa gtaatagaga tcggagtctc
1901 taagaaatta gttcctacag agtctaaggc catggagtca aagattcaaa
1951 ttgaggacct aacagaactc gccgtgaaga ctggcgaaca gttcatacag
2001 agtctcttaa gactcaatga caagaagaaa atcttcgtca acatggtgga
2051 gcacgacact ctgatctact ccaaaaatat caaagaaaca gtctcagaag
2101 accaaagggc aattgagact ttccaacaaa gggtaatatc gggaaacctc
2151 ctcggattcc attgcccagc tatctgtcac tttattgtga agatagtgga
2201 aaaggaaggt ggcacctacc aatgccatca ttgcgataaa ggaaaggcta
2251 tcgttaaaga tgcctctgcc gacagtggtc ctaaagatgg acccccaccc
2301 acgaggagca tcgtggaaaa agaagacgtt ccaaccacgt cttcaaagca
2351 agtggattga tgtgacatct ccactgacgt aagggatgac gcacaatccc
2401 actatccttc gcaagaccct tcctctatat aaggaagttc atttcatttg
2451 gagaggacac acaaaaaaaa aaaaaaaaac acaaaaaaat caccagtctc
2501 tctctacaaa tctatctctc tctattttct ccataataat gtgtgagtag
2551 ttcccagata agggaattag ggttcttata gggtttcgct catgtgttga
2601 gcatataaga aacccttagt atgtatttgt atttgtaaaa tacttctatc
2651 aataaaattt ctaattccta aaaccaaaat ccagtactaa aatccagatc
2701 tcctaaagtc cctatagatc tttgtggtga atataaacca gacacgagac
2751 gactaaacct ggagcccaga cgccgtttga agctagaagt accgcttagg
2801 caggaggcgt taggaaaaga tgctaaggca gggttggtta cgttgactcc
2851 cccgtaggtt tggtttaaat atcatgaagt ggacggaagg aaggaggaag
2901 acaaggaagg ataaggttgc aggccctgtg caaggtaaga agatggaaat
2951 ttgatagagg tacgttacta tactcatact atacgctaag ggaatgcttg
3001 tatttaccct atatacccta ataacccctt atcgat