Sequence of DPV Barley yellow dwarf virus-GPV
Barley yellow dwarf virus Chinese field isolate RNA dependent RNA polymerase gene, partial cds; and coat protein and movement protein genes, complete cds.
ACC No: L10356
Dated: 2006-02-27 | Length: 1202 | CRC: 420841160
ID L10356 standard; genomic RNA; VRL; 1202 BP.
XX
AC L10356;
XX
SV L10356.1
XX
DT 12-FEB-1993 (Rel. 34, Created)
DT 27-FEB-2006 (Rel. 86, Last updated, Version 7)
XX
DE Barley yellow dwarf virus Chinese field isolate RNA dependent RNA
DE polymerase gene, partial cds; and coat protein and movement protein genes,
DE complete cds.
XX
KW .
XX
OS Barley yellow dwarf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Luteovirus.
XX
RN [1]
RP 1-1202
RA Cheng Z., Keese P., He X., Waterhouse P., Zhou G., Graham M., Chen J.;
RT "Nucleotide sequence of the coat protein gene of GPV, a Chinese BYDV
RT isolate, indicates it is a novel BYDV species";
RL Unpublished.
XX
CC On Aug 15, 1997 this sequence version replaced gi:323231.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1202
FT /db_xref="taxon:12037"
FT /mol_type="genomic RNA"
FT /organism="Barley yellow dwarf virus"
FT /isolate="Chinese field isolate"
FT /serotype="GPV"
FT CDS <1. .405
FT /codon_start=1
FT /db_xref="GOA:O39518"
FT /db_xref="InterPro:IPR001795"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:O39518"
FT /product="RNA dependent RNA polymerase"
FT /protein_id="AAB67363.1"
FT /translation="KEGSYNTSSTNSRIRVMAAYHCGASWAIAMGDDALEAPDSDLSKY
FT KSLGFKVEVSGELEFCSHILKSPTLAIPVNANKMLYRLIHGYNPECGNAEVISNYLNAA
FT CSVLHELRHDQELCAQLQKWLISDVTTKLT"
FT CDS 597. .1202
FT /codon_start=1
FT /db_xref="GOA:Q65865"
FT /db_xref="InterPro:IPR001517"
FT /db_xref="UniProtKB/TrEMBL:Q65865"
FT /product="coat protein"
FT /protein_id="AAB67361.1"
FT /translation="MSTVALRNGNGPRRRRVSRRRVVARTQPMVMVATNGQPRRRRRRR
FT PAGRGRRRVPRSTGGSHGETFVFAKDSLKGNSSGSLTFGPSLSEYPAFKDGILKAYHEY
FT KITNCVLQFITEASSTAAGSISYELGPHCKSSSLTSTINKFSITKTGARSFPAKMINGL
FT EWVANDTDQFRILYKGNGDANTAGSFRITMKVLFQNPK"
FT CDS 619. .1074
FT /codon_start=1
FT /db_xref="InterPro:IPR001964"
FT /db_xref="UniProtKB/TrEMBL:Q65866"
FT /note="putative"
FT /product="movement protein"
FT /protein_id="AAB67362.1"
FT /translation="MAMVRVDDESLGGGLLQERSQWLWSLPTASPGEEDADDQLVVGEE
FT EFQDQQEEAMARHSFSQRIHSRATPLEVSPSGRLYQSIRHSKMEYSRPTMNIRSQIVSY
FT SSSPRPLQPQPAPSLMSWAPIASHLHSRQRSISSQSPKLVRGASQRR"
XX
SQ Sequence 1202 BP; 332 A; 305 C; 280 G; 285 T; 0 other;
l10356 Length: 1202 27-FEB-2006 Type: N Check: 7482 ..
1 aaagagggat cgtataacac gtcctcaact aattcacgga ttcgggtcat
51 ggctgcctat cattgtggcg cctcatgggc gattgctatg ggcgatgatg
101 cccttgaagc tccagactca gatttgtcga aatacaaaag tttgggcttc
151 aaagtcgagg taagtggaga gttggaattt tgctctcata ttctgaaaag
201 ccccaccctc gccattccgg tcaatgcaaa caaaatgttg taccgcctga
251 tccacggata caacccggaa tgtggtaacg cagaggtaat ctcgaattac
301 cttaatgcag cttgctcagt gctgcatgag ctccgacacg atcaggagct
351 ttgcgctcaa cttcaaaagt ggttgatatc tgacgtcacc acaaaattaa
401 cctgagcaca aaactagccg gacacacgta agttgcgagt accggaagtt
451 cagccttaca cataagccca acattgattt ccatttgtta gcgggattgc
501 aatcggattt atatcctcaa tccccatctc aatttgttgg agtttattta
551 agtctacctt aaaggtttcc gacccacatt ccgtgaaata agttaaatga
601 gtacggtcgc ccttagaaat ggcaatggtc cgcgtagacg acgagtctct
651 cggaggcggg ttgttgcaag aacgcagcca atggttatgg tcgctaccaa
701 cggccagccc aggcgaagaa gacgccgacg accagctggt cgtgggcgaa
751 gaagagttcc aagatcaaca ggaggaagcc atggcgagac attcgttttc
801 gcaaaggatt cactcaaggg caactcctct ggaagtctca ccttcgggcc
851 gtctttatca gagtatccgg cattcaaaga tggaatactc aaggcctacc
901 atgaatataa gatcacaaat tgtgtcttac agttcatcac cgaggcctct
951 tcaaccgcag ccggctccat ctcttatgag ttgggccccc attgcaagtc
1001 atcttcactc acgtcaacga tcaataagtt ctcaatcacc aaaactggtg
1051 cgaggagctt cccagcgaag atgattaacg ggttagagtg ggtcgccaac
1101 gacacggatc aattccgcat cctttacaaa ggtaacggcg acgccaacac
1151 cgcaggttcc ttccgcatca cgatgaaggt cctgtttcaa aacccgaaat
1201 ag