Sequence of DPV Southern bean mosaic virus
Southern bean mosaic virus p11.5 protein gene, complete cds, p96 protein gene, complete cds, coat protein gene, complete cds.
ACC No: L34672
Dated: 2005-04-17 | Length: 4109 | CRC: 869511537
!!NA_SEQUENCE 1.0
ID MSBP5P standard; genomic RNA; VRL; 4109 BP.
XX
AC L34672;
XX
SV L34672.1
XX
DT 23-JUL-1994 (Rel. 40, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Southern bean mosaic virus p11.5 protein gene, complete cds, p96 protein
DE gene, complete cds, coat protein gene, complete cds.
XX
KW coat protein; p11.5 protein; p96 protein; polymerase; protease.
XX
OS Southern bean mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN [1]
RP 1-4109
RX MEDLINE; 95133162.
RX PUBMED; 7831784.
RA Othman Y., Hull R.;
RT "Nucleotide sequence of the bean strain of southern bean mosaic virus";
RL Virology 206(1):287-297(1995).
XX
FH Key Location/Qualifiers
FH
FT source 1. .4109
FT /db_xref="taxon:12139"
FT /mol_type="genomic RNA"
FT /organism="Southern bean mosaic virus"
FT /strain="Bean"
FT 5'UTR 1. .92
FT CDS 93. .416
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q83471"
FT /product="p11.5 protein"
FT /protein_id="AAA66949.1"
FT /translation="MSYRFLTVRAFGFTGFHCDATRLLSETEVIDVPTSMTLLARPNSD
FT LKLLGPSVKRIVTRFSLDSTFKLTSSITLCVSRLCAESALHPYLSFSASGTSTVVGEAI
FT LFL"
FT CDS 505. .3090
FT /codon_start=1
FT /db_xref="GOA:Q83472"
FT /db_xref="InterPro:IPR001795"
FT /db_xref="UniProt/TrEMBL:Q83472"
FT /note="putative"
FT /function="polymerase, protease"
FT /product="p96 protein"
FT /protein_id="AAA66950.1"
FT /translation="MYHPGRSPSFLITLANVICAAILFDIHRGVTNPAHYPIVAWIPRS
FT LLCLVERVIRDIPYKYVRTRLLQRRRLPGYIAQSAVFVPLVYTDLIARMSETAWTTGTG
FT YQLMSTGIRNADIVDTSTGSFTESADGYQQSRSVLCRHWPEERLRLAVYSDSEPRSIGP
FT PRTVMMRLMVILLFTGHHVWNNSMAAPTALAKAGKQVADSTDWQTPLSCDHRCLICSGA
FT CAKTVWSKLGVKATQLVCPSDKDAVTCYGGSSSDNLLSGTGVCSKVDFSSKLTHSCPTA
FT AWSEWNTDLLCRGVVGMHVGFEDIGKLNRGVNAFYVSNYLLRSQETLPPELSVIEIPFE
FT DVETRSYEFIEVEIKGRGKAKLGKREFAWIPESGKYWADDDDDSLPPPPKVVDGKMVWS
FT SAQETVADALNYQRAAGSRPLPPFSTCRLRLQRRRSSLYKRNALRFVGQSACKFRVCRK
FT ILQMKSLELLGSSQNCQTSPGPSEAPKQSFTPCYAKQESLIPLESQGILKELVKTSLKA
FT ATPPPNPVTVSVEKLVLRQQSTRSLQEERNRRKSTRKSSPGVPPLPPRLNQQRPPLRHL
FT ELVALCVTERLFLLSEAEDLLDESPVDLVRRGLCDPVRLFVKQEPHASRKVREGRFRLI
FT SSVSLVDQLVERMLFGPQNQLEIAEWEHIPSKPGMGLSLRQQAKSLFDDLRVKHSRCPA
FT AEADISGFDWSVQDWELWADVEMIIVLGGFGHKLAKAARNRFSCFMNSVFQLSDGTLIE
FT QQLPGIMKRSLDLLTNSRIRCLMAELIGSPWCIAMGDDSVEGWVDGAKDKYMRLDTRAD
FT YKPCATTISGRLYEVEFCSHVIRKIDVGWRRGLKLCLNTCLRASGSLRT"
FT CDS 3196. .3981
FT /codon_start=1
FT /db_xref="GOA:Q83473"
FT /db_xref="HSSP:4SBV"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProt/TrEMBL:Q83473"
FT /evidence=EXPERIMENTAL
FT /product="coat protein"
FT /protein_id="AAA66951.1"
FT /translation="MATRLTKKQLAQAIQNTLPNPPRRKRRAKRRAAQVPKPTQAGVSM
FT APIAQGTMVRLREPSLRTAGGVTVLTHSELSTELSVTNAIVITSELVMPYTMGTWLRGV
FT AANWSKYSLLSVTYTYLPSCPSTTSGSIHMGFQYDMADTLPVSVNQLSNLRGYVSGQVW
FT SGSSGLCYINGTRCLDTANAITTTLDVGQLGKKWYPFKTSTDFTTAVGVNVNIATPLVP
FT ARLIIAMLDGSSSTAVSTGRLYVSYTIQLIEPTALALNN"
FT 3'UTR 3982. .4109
XX
SQ Sequence 4109 BP; 976 A; 1011 C; 1054 G; 1068 T; 0 other;
L34672 Length: 4109 May 10, 2005 10:09 Type: N Check: 9686 ..
1 cacaaaatat aagaaggaaa gctggatttc ctacctttgt gtttccattg
51 tcgaagcatt ggtcaacgat tacaaaacgg tgcattttct gcatgagcta
101 tcgtttccta acagttagag cattcggctt taccggtttc cattgcgacg
151 ctacgcgctt gctaagtgaa acagaagtca tagacgttcc tacgtccatg
201 actttgttgg cgagaccgaa ctcagacttg aaactgcttg gccccagtgt
251 gaagagaatt gttacacgat tctccctcga ttcaacgttc aagttgactt
301 cgagtatcac cctgtgcgtg tcgagattgt gtgccgagtc tgcgctacat
351 ccctatctgt cattttcagc aagtgggact tctactgtag taggagaggc
401 cattttgttc ctgtagatca gaacggggat ctgtttagga ttggaacgct
451 ccgggagacg ggagagaaat acttctactt ctgtgataaa tctatctgta
501 gacaatgtat catccaggcc gctcaccatc attcctgata acgttggcaa
551 acgttatctg cgcggcgatt ttgttcgaca tccatcgggg ggttaccaac
601 ccggctcact atccaatagt ggcctggata ccccgttcgt tactctgcct
651 ggttgagcgc gtcattcgcg acatacctta taagtatgta agaactcggc
701 tgctccagag gagaaggttg ccaggctata tcgcgcagtc tgccgtattt
751 gtcccgctgg tgtatacaga cttgatcgct cgaatgtcgg agaccgcatg
801 gaccaccggg accgggtatc aactgatgag cactggtatc cgcaacgctg
851 acattgttga tacgagtaca ggcagcttca ccgagtctgc ggacggttac
901 caacagtcac ggtcagtcct gtgcagacat tggcctgaag agcgtcttcg
951 acttgccgtg tattccgata gcgaaccacg aagcattggt cctcctcgga
1001 ctgtcatgat gagattgatg gtgatacttc ttttcactgg tcaccatgtt
1051 tggaataatt ccatggcggc tcctaccgct ctagctaaag ctggcaagca
1101 ggtcgctgac tcgacggatt ggcaaacccc actctcttgc gaccatagat
1151 gcttgatttg tagtggtgcg tgtgccaaaa cagtgtggtc caagctagga
1201 gtgaaagcga ctcaattggt ttgtccatca gataaggatg ccgtaacctg
1251 ttacggtgga tctagttcag acaacttact gtcggggacg ggcgtttgta
1301 gtaaggtcga tttctcatcc aagttaaccc actcatgccc cacggcagct
1351 tggtcggagt ggaacaccga tctactctgc agaggtgtgg taggaatgca
1401 cgttgggttt gaagatatcg gaaaactcaa tcgtggcgtg aacgctttct
1451 atgtgtcaaa ttacttattg aggtctcaag agactcttcc tccagagttg
1501 tccgtgatcg aaattccttt cgaagacgtt gagactcgga gttatgagtt
1551 cattgaggtt gagatcaaag gcagaggtaa ggccaaactt ggtaagcgtg
1601 agttcgcttg gattccagaa tcaggaaaat actgggctga tgatgacgac
1651 gattccttgc ccccaccccc taaggtggta gacggcaaga tggtttggag
1701 ttctgctcag gaaactgttg cggacgcttt aaactaccag cgggcggcag
1751 ggtcaaggcc cttgccgccc ttctcaactt gcaggctacg acttcaaaga
1801 aggagaagca gcctctacaa gaggaatgcc cttagatttg ttgggcagtc
1851 ggcttgcaag tttagagtgt gtagaaagat actccagatg aagtccttag
1901 agctactagg gtcttcccag aattgtcaga cttctcctgg cccgagcgag
1951 gctccaaagc agagcttcac tccctgctac gccaagcagg aaagtttaat
2001 cccactggaa tcccaaggaa tcttgaagga gcttgtcaaa acctccttga
2051 aagcagctac cccacctcca aatcctgtta ctgtctccgt ggagaagctg
2101 gtgcttcgac agcagtctac aagaagtctg caagaagagc gcaatcggcg
2151 gaaatcaacg agaaagtcca gtccaggagt cccgcctctc ccgcctcgcc
2201 tcaaccaaca aagacctcct ttgaggcacc tagagttagt tgctctgtgt
2251 gttaccgaga gattgtttct actcagcgaa gccgaggatt tacttgacga
2301 atctcctgtg gacttggttc gcaggggttt gtgtgacccg gttcggttgt
2351 ttgttaagca ggagccccac gcctcccgaa aggtgagaga gggtcgcttc
2401 cgcttgatat catctgtttc gctggttgat cagcttgtgg agcgtatgct
2451 ctttgggcct caaaaccagc ttgaaatcgc tgagtgggag catattccct
2501 caaaacccgg catgggctta tcgctgcggc aacaggccaa aagcttgttt
2551 gacgacttga gagttaaaca ctctcgttgt cctgcagctg aagctgacat
2601 ttcaggtttt gattggtctg ttcaggactg ggagttgtgg gctgatgtag
2651 agatgataat cgttctgggg ggctttggcc acaaactggc taaagccgcc
2701 aggaataggt tttcgtgttt catgaactca gtcttccagc tctcggatgg
2751 cacactcata gaacagcaat tgcctggtat tatgaagcgg tcattagacc
2801 tcctcaccaa ctccagaatt cgctgcctta tggctgagct cattggctcc
2851 ccgtggtgta tcgccatggg tgatgattct gttgaaggtt gggttgatgg
2901 ggcaaaggac aagtacatga gactagacac acgtgcagat tataaaccct
2951 gtgcaacaac catttccggt cgcttatacg aggtagagtt ctgctctcac
3001 gttataagga agatcgatgt tggttggcgt cgtggcctaa aactctgttt
3051 aaatacttgt ctgagggcaa gtggttcttt gaggacttag agcgagagct
3101 cagttcgtca ccccactggc ccagaatcag acactatgta gtggggaata
3151 ctccatcgcc ccacaaaatt aatttagaaa atcaaagtcc gcgctatggc
3201 tacccgtctg accaaaaaac agctggctca ggctatccag aacaccctgc
3251 cgaacccgcc gcgtcgtaaa cgtcgtgcta aacgtcgtgc tgctcaggtt
3301 ccgaaaccga cccaggctgg ggtatccatg gcccctattg ctcaggggac
3351 tatggttcgc ttacgtgaac catcgcttag aacggctgga ggtgtgacag
3401 tcctaacgca ctctgagctc tcaactgagc tctcagtgac gaatgcgata
3451 gtcatcacct ctgagctcgt tatgccctac acaatgggca cctggcttcg
3501 aggcgttgcg gctaattggt cgaaatatag tttgctgtcg gtcacatata
3551 cgtatctccc ctcttgtcct tcaacgacat ctgggtccat tcacatgggc
3601 ttccaatatg atatggctga cacccttccc gtatccgtta accagttatc
3651 caaccttaga ggttatgtat cagggcaggt ctggtctgga tcctctggct
3701 tgtgctacat aaatggcacg aggtgtcttg acacggccaa tgctatcacg
3751 accacactgg acgttggaca gcttggcaag aagtggtatc ctttcaagac
3801 tagcacagac ttcacaacgg ctgttggcgt aaatgtcaac attgccactc
3851 ccctggtccc ggcgaggcta ataatagcca tgctggatgg gtcgagttct
3901 acggctgtga gtactggacg cctatacgtg tcgtatacta ttcaactgat
3951 agagcccact gctttggcct tgaacaactg aaggagttgt ataataatac
4001 ctgcacccct ctccttggcg ggagggtgtt tcgctttcac atgccacgtg
4051 tttgagggag aatgcacgtt aatcatccct ccgctagtga tggagcgtaa
4101 tccaaaagt