Sequence of DPV Echinochloa hoja blanca virus

Echinochloa hoja blanca virus inclusion body protein (pv4) gene and NS4 gene, complete cds.

ACC No: L48441

Dated: 2000-03-04 | Length: 1874 | CRC: 472793946

                !!NA_SEQUENCE 1.0
ID   EHPC44NCP  standard; RNA; VRL; 1874 BP.
XX
AC   L48441;
XX
SV   L48441.1
XX
DT   24-OCT-1995 (Rel. 45, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Echinochloa hoja blanca virus inclusion body protein (pv4) gene and NS4
DE   gene, complete cds.
XX
KW   inclusion body protein; NS4.
XX
OS   Echinochloa hoja blanca virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-1874
RX   MEDLINE; 97093418.
RA   de Miranda J.R., Munoz M., Wu R., Espinoza A.M.;
RT   "Sequence of Echinochloa hoja blanca tenuivirus RNA-4";
RL   Virus Genes 13(1):61-64(1996).
XX
RN   [2]
RP   1-1874
RA   de Miranda J.;
RT   ;
RL   Submitted (21-SEP-1995) to the EMBL/GenBank/DDBJ databases.
RL   Joachim de Miranda, CIBCM, University of Costa Rica, San Jose, Costa Rica
XX
DR   SPTREMBL; Q66602; Q66602.
DR   SPTREMBL; Q66603; Q66603.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1874
FT                   /db_xref="taxon:42630"
FT                   /organism="Echinochloa hoja blanca virus"
FT                   /strain="ESEJN"
FT                   /clone="EHBV-4a"
FT   CDS             55. .579
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q66602"
FT                   /evidence=EXPERIMENTAL
FT                   /gene="pV4"
FT                   /standard_name="NCP"
FT                   /product="inclusion body protein"
FT                   /protein_id="AAC37999.1"
FT                   /translation="MDFLKTDVAVGPIAGLNYRRLYDILPNKVSDNITLPDLKNPDKVT
FT                   EDNKKLILCGFIYVAYHHPIETDLDFTSVHKHMPGISESSLEHLLGTDESNETINLGKL
FT                   FDILQERLGDWITMNFLKHNNRMSKDQIKTLCETIVDLAKAEGGDTETYETVWKKMPAY
FT                   YSNLLQQILHK"
FT   CDS             complement(987. .1838)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q66603"
FT                   /note="putative"
FT                   /gene="NS4"
FT                   /standard_name="pc44"
FT                   /protein_id="AAC38000.1"
FT                   /translation="MSPARYNPFKKSTLLTDDLSEKAEKKYEQKNKKKLALKTRPLTKG
FT                   RLTIDTAATVLGLEPFSFADVRANSYDMFVAKQDYSVCANRRTHFTIDSSPLFFRKPLQ
FT                   TFPFFRIATFAIIWLGIKGRANGTVTFRIIDRSYKDPVKQVEVGICYPMAKTFAVLGSL
FT                   PNFMSYEDSEKMQVEIVVKDDSVENCVISRSLWFWGIERTDFPVHMEPQKTVMFEFEPL
FT                   PDRTINHLSKFKNFTTDVVQRAVTTAFTTKQALEEEPGIEFGVMKQPGVPLVQNKRVMI
FT                   EA"
XX
SQ   Sequence 1874 BP; 563 A; 420 C; 377 G; 514 T; 0 other;

L48441  Length: 1874  December 21, 2001 15:47  Type: N  Check: 5572  ..

       1  acacaaagtc cagggcaaaa aaccataatc taaacattct agcaataaac
      51  actcatggac tttctcaaga ctgatgtggc tgtaggacct attgcaggat
     101  tgaactatag acgtttatat gatattcttc ctaacaaagt tagtgacaat
     151  atcaccctcc cagaccttaa gaatccagac aaagttactg aggacaacaa
     201  gaagctcatt ctgtgtggct tcatctatgt tgcgtaccat caccccattg
     251  agactgacct agatttcaca tctgttcaca agcatatgcc tgggatcagt
     301  gagtcttccc tggaacatct cttaggcacg gatgaatcaa acgaaactat
     351  aaatctcggc aagctatttg atattctgca ggagaggcta ggagactgga
     401  tcaccatgaa ctttctgaag cataataata gaatgtctaa agaccagatc
     451  aagactcttt gcgagactat tgttgacttg gcaaaagcag aggggggtga
     501  cacagagacc tatgaaacag tctggaagaa gatgccagca tactattcaa
     551  atttactcca acagatcctt cacaaatgat taagattaag gttgtacaga
     601  ttagtgaatc attcactttt aataataccc ctatgcatga tagacctcac
     651  aaactccaca atctcaaata cgatagcaaa gctgactaag ctctttacac
     701  actaagcgct gcacaatgat gcgccaaata cataaaaaca cacaaatgag
     751  tgaatcaaag actcacactc catatgaaac aggaacactg ttcacttaac
     801  ggtgctatgc acctcatccg gatgtgttat cggatagggt gcttagcacc
     851  cattaaaaca ttggttccta aatatgtgat gcatgcatag catgtcaact
     901  atccctagca ccccaaagag gagttatgag acttagtctc gtgaaactag
     951  agaacctcta agaatcaggc cataggcctc agagagttaa gcctcgatca
    1001  tcaccctctt gttctgcact agaggaacac cgggctgctt catcacacca
    1051  aattcaatgc caggctcttc ttcgagggcc tgtttggtgg tgaatgctgt
    1101  tgtcactgct ctctggacaa catcagtggt gaagtttttg aatttgctga
    1151  gatgattaat ggttctatct ggaagaggtt caaactcgaa catcacagtt
    1201  ttctgaggtt ccatgtggac cggaaagtca gttctctcga ttccccagaa
    1251  ccataatgat cttgatatga cacagttctc cactgagtca tctttgacta
    1301  ctatctccac ctgcatcttc tctgaatctt catatgacat gaagttcggt
    1351  agagatccaa ggacggcaaa agtcttggcc attggatagc aaatccccac
    1401  ctccacctgt ttgacagggt ccttataaga cctatcaatt atcctaaaag
    1451  taacagttcc gttagccctt cctttgattc ccaaccagat aattgcaaaa
    1501  gttgcaattc ggaagaaagg gaaagtttgc agaggctttc gaaagaaaag
    1551  aggagaagaa tcaatagtga agtgagtcct cctattagca cagacagagt
    1601  aatcttgttt tgcaacaaac atgtcatagc tgttggctct cacatctgca
    1651  aagctgaagg gttccagacc aagaacagtt gcagctgtgt ctatggttag
    1701  gcgtcctttg gtgagaggtc tggtcttcag agccagcttt ttcttgttct
    1751  tctgctcata tttcttttcc gccttctcag acaagtcatc ggtcaagaga
    1801  gtgcttttct tgaacggatt gtaccttgct ggagacatgt ttgttcacaa
    1851  gatttgattg ccctgacttt gtgt