Sequence of DPV Echinochloa hoja blanca virus
Echinochloa hoja blanca tenuivirus (clone 3B) pv3 and nucleoprotein genes, complete cds.
ACC No: L75930
Dated: 2000-03-04 | Length: 2336 | CRC: -1293198124
!!NA_SEQUENCE 1.0
ID EHPV3G standard; RNA; VRL; 2336 BP.
XX
AC L75930;
XX
SV L75930.1
XX
DT 24-JAN-1996 (Rel. 46, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE Echinochloa hoja blanca tenuivirus (clone 3B) pv3 and nucleoprotein genes,
DE complete cds.
XX
KW nucleoprotein.
XX
OS Echinochloa hoja blanca virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2336
RA de Miranda J., Munoz M., Madriz J., Wu R., Espinoza A.M.;
RT "Sequence of Echinochloa hoja blanca tenuivirus RNA-3";
RL Virus Genes 13:66-68(1996).
XX
RN [2]
RP 1-2336
RA Madriz J., de Miranda J., Munoz M., Bonilla J.A., Wu R., Espinoza A.M.;
RT "Characterisation of Echinochloa hoja blanca virus";
RL Unpublished.
XX
RN [3]
RP 1-2336
RA de Miranda J.;
RT ;
RL Submitted (10-JAN-1996) to the EMBL/GenBank/DDBJ databases.
RL Joachim de Miranda, CIBCM, University of Costa Rica, San Jose, Costa Rica
XX
DR SPTREMBL; Q66605; Q66605.
DR SPTREMBL; Q66606; Q66606.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2336
FT /db_xref="taxon:42630"
FT /organism="Echinochloa hoja blanca virus"
FT /strain="Costa Rica"
FT /clone="3B"
FT CDS 97. .696
FT /citation=[1]
FT /codon_start=1
FT /db_xref="SPTREMBL:Q66605"
FT /note="putative"
FT /gene="pv3"
FT /protein_id="AAB07226.1"
FT /translation="MNVSLYYSGAPVSDHSLLSKNGLSNIVLTCRDLPIPIDLLSLFFD
FT ILNERHPSFDEHMFLQMIRKPDDPENLSVFLKSAIWMLSHKRDLPGHYRLPLTCLVSTY
FT SEYFVELKPRQPSTKCWFCKIAKDGLPFRVEGVHGFPSEAELYIVPSKEHTIERFEVLS
FT GKKLYRSPSKKKHGYLIASNKPPLTTKYIEYDPSKP"
FT misc_feature 697. .1262
FT /citation=[1]
FT /note="putative"
FT /function="intergenic region, possible subgenomic RNA
FT terminators"
FT CDS complement(1262. .2215)
FT /citation=[1]
FT /codon_start=1
FT /db_xref="SPTREMBL:Q66606"
FT /evidence=EXPERIMENTAL
FT /function="nucleic acid encapsidation"
FT /product="viral nucleoprotein"
FT /protein_id="AAB07227.1"
FT /translation="MSVADIQTEIERVTALALKYIADHKDTLVTFVGQIEYNGYDAGKL
FT LQILKKKAEGRDFGKDLGFLLVVRYTRGTGFVRDVRKKIKTAAGGDTAHEIVTHYGVVQ
FT SVGDNADAITLGRLASLFPAVSMSIVKNVSSGAKLAVDSSDLGTSGLDILLWDFVPQFI
FT TLDSVTAPYCTGKGMNVILFSLHVLHGALTTRKTMPDLKKKARSLVTDFELVKYTTELL
FT VITCNAKNLKAERKTAYRKSLMSSFQEGAGGDLGFKESFWTSLAKVSTGCVKKMKKDAQ
FT AYLSERTSLLKLFVENCNKTEAEVTEAIKSYFVTDA"
XX
SQ Sequence 2336 BP; 679 A; 502 C; 425 G; 730 T; 0 other;
L75930 Length: 2336 December 21, 2001 15:47 Type: N Check: 5063 ..
1 acacaaagtc ctgggtataa aaaaaacaaa caaagatata agaagagtga
51 aacttcagtg acttcatctc ttattgcagt gataactcag gacaatatga
101 atgtatcctt gtactatagt ggagctcctg tttctgatca cagcttgctt
151 agcaaaaatg ggctctcaaa cattgtcttg acatgcaggg atcttcccat
201 acctatagat ctcttgtcac tattctttga tattttgaat gagcgacacc
251 ctagttttga tgagcacatg tttttgcaaa tgataaggaa gcctgatgat
301 cctgaaaact tgtcagtttt ccttaagagt gccatctgga tgctgtctca
351 caaaagagac ttacctggac actacaggct tcctctaact tgcttagtgt
401 ctacatacag tgaatatttt gtggaattga agcctaggca gccttctacc
451 aagtgctggt tttgcaagat tgcgaaagat gggttgcctt tccgtgttga
501 aggtgtgcat ggcttccctt ctgaagcaga gttatatata gtgccttcca
551 aagagcatac tatagagcgg tttgaagtgc taagtggcaa gaaattgtac
601 cggtcaccta gtaagaagaa gcatggttat ttgatagcat caaataaacc
651 accattgaca actaagtaca tagaatatga tccaagtaag ccttgagcag
701 cattttaatg agataggtgt ttttgctttg gttggtgtct ctgctgctca
751 ggttagctac agccatgctg cgtcacaatc actcaagagt tagtctaaga
801 ttaattccaa actaaaatta ggctacgcct acttttccca aaaaaacttt
851 ctgtgctatg cacagcatcc ggatactgta tcggataggt tttacctaac
901 ctaatttttt tgtatttcag tgttttttaa tttttttgtt ttttcatatt
951 tatgattttt tttgcatttt tcatttttcc atttttttga tttttttaat
1001 aatgtttatc ataaatctaa gagatatatt acttattgtt acaataatat
1051 tataatacac acagcacaca tatttaacac agagtacatt aagaatacat
1101 gagtaacaat ataacaacta gattataaac atactaatga gaaaattaat
1151 taacaattaa aacatcactc ataaatccac atattattta tttgcatata
1201 tacagatccc ttcagctgtc tcaaacctct ccatcctcat cttgcttctg
1251 ctcctctctg attacgcatc agtgacaaag taggacttga tggcctcagt
1301 cacttctgct tctgttttgt tgcagttctc tacaaatagt ttcagtagag
1351 aagtcctctc tgataagtag gcttgtgcat ccttcttcat tttcttgaca
1401 cagcctgtcg agaccttggc tagagaggtc cagaaagact ccttaaagcc
1451 aaggtcacca ccagcacctt cttggaaaga actcatcaaa gacttcctgt
1501 aggcagtctt cctctctgct ttgagatttt tggcattaca ggtaatgacc
1551 aacaattcgg tcgtgtactt aaccaactca aagtcagtca cgaggcttct
1601 agccttcttc ttcagatcag gcatggtttt ccttgtggtg agagcaccat
1651 gaagaacatg cagggagaag agtattacgt tcataccttt tcctgtgcag
1701 tatggtgctg tgacagaatc cagagtaata aactgaggaa caaagtccca
1751 cagaaggata tcaagaccag atgttcccag gtctgaggaa tccacagcaa
1801 gtttagctcc tgaagaaaca ttcttcacaa tgctcattga tacagccggg
1851 aacaatgagg caagtctgcc tagagtgata gcatcagcat tgtcaccaac
1901 agactgcaca acaccataat gagttactat ctcatgggct gtgtctccac
1951 cagcagcggt cttgatcttc ttcctgacat ccctaacaaa gccagtccct
2001 cttgtgtacc tcaccaccaa gagaaagccg agatcttttc caaaatctct
2051 tccttcagcc ttcttcttca aaatctgaag aagctttcca gcatcatatc
2101 cattgtactc tatctgacca acaaaggtca caagtgtgtc tttgtggtca
2151 gctatgtact tcaaagctag agcggtgacc ctctctatct cagtctggat
2201 atcagctaca gacattgcca tcgtctcaac tgcagatgtg tcttctcaaa
2251 tgggagcaat tgtacgattg agcaaaagtt cgtttcagaa aacactcttg
2301 cttgatgatc tttacaatgc tacccagact ttgtgt