Sequence of DPV Cauliflower mosaic virus

Cauliflower mosaic virus (CAMV) BstEII/XhoI aphid transmissibility fragment DNA.

ACC No: M17415

Dated: 2000-03-04 | Length: 1556 | CRC: -2129743257

                !!NA_SEQUENCE 1.0
ID   MCAATFA    standard; DNA; VRL; 1556 BP.
XX
AC   M17415;
XX
SV   M17415.1
XX
DT   16-JUL-1988 (Rel. 16, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Cauliflower mosaic virus (CAMV) BstEII/XhoI aphid transmissibility fragment
DE   DNA.
XX
KW   open reading frame.
XX
OS   Cauliflower mosaic virus
OC   Viruses; Retroid viruses; Caulimovirus.
XX
RN   [1]
RP   1-1556
RA   Woolston C.J., Czaplewski L.G., Markham P.G., Goad A.S., Hull R.,
RA   Davies J.W.;
RT   "Location and sequence of a region of Cauliflower mosaic virus gene 2
RT   responsible for aphid transmissibility";
RL   Virology 160:246-251(1987).
XX
DR   SPTREMBL; Q83161; Q83161.
DR   SPTREMBL; Q83162; Q83162.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1556
FT                   /db_xref="taxon:10641"
FT                   /organism="Cauliflower mosaic virus"
FT                   /clone="pCa33."
FT                   /isolate="aphid nontransmissible Campbell isolate"
FT   CDS             <1. .212
FT                   /codon_start=3
FT                   /db_xref="SPTREMBL:Q83161"
FT                   /note="ORF VII; putative"
FT                   /product="unknown protein"
FT                   /protein_id="AAA66602.1"
FT                   /translation="SFKIKTSSLTPVTDRFTTVRFQNNIECVYANFDSQLKSSYDGRSK
FT                   KIKNLSLKNLRCYEAFLRKYLLEQ"
FT   CDS             273. .1256
FT                   /codon_start=1
FT                   /note="ORF I; putative"
FT                   /product="unknown protein"
FT                   /protein_id="AAA66603.1"
FT                   /translation="MDLYPEENTQSEQSQNSENNMQIFKSENSDGFSSDLMISNDQLKN
FT                   ISKTQLTLEKEKIFKMPNVLSQVMKKAFSRKNEILYCVSTKELSVDIHDATGKVYLPLI
FT                   TREEINKRLSSLKPEVRKIMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSRRDC
FT                   LLGAAKGNLAYGKFMFTVYPKFGISLNTQRLNQTLSLIHDFENKNLMNKGDKVMTITYI
FT                   VGYALTNSHHSIDYQSNATIELEDVFQEIGNVQQSDFCTIQNDECNWAIDIAQNKALLG
FT                   AKTQSQIGNSLQIGNSASSSNTENELARVSQNIDLLKNKLKEICGE"
FT   CDS             1258. .>1556
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q83162"
FT                   /note="ORF II; putative"
FT                   /product="unknown protein"
FT                   /protein_id="AAA66604.1"
FT                   /translation="MSITGQPHVYKKDTIIRLKPLSLNSNNRSYVFNSSKGNIQNIINH
FT                   LNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSRGVDYS"
XX
SQ   Sequence 1556 BP; 583 A; 278 C; 264 G; 431 T; 0 other;

M17415  Length: 1556  December 21, 2001 15:54  Type: N  Check: 8204  ..

       1  gatctttcaa gatcaaaact agttccctca caccggtgac cgacaggttt
      51  accaccgtaa ggtttcagaa caacatcgaa tgcgtttacg ccaacttcga
     101  ctctcagctc aagtcgtcgt acgatggtag atctaaaaag atcaaaaatc
     151  taagccttaa aaatcttaga tgttatgaag ccttcctcag gaagtacctt
     201  ctggaacaat aaatctctct gagaatagta ctctaacgag tatccacagg
     251  aaaaataatc ttctgtgttg agatggattt gtatccagaa gaaaataccc
     301  aaagcgagca atcgcagaat tctgaaaata atatgcaaat atttaagtca
     351  gaaaattcgg atggattctc ctccgattta atgatctcaa acgatcaatt
     401  aaaaaatatc tctaagaccc aattaacttt ggagaaagaa aagatattta
     451  aaatgcctaa cgttttatct caagttatga aaaaagcgtt tagcaggaaa
     501  aacgagattc tttactgcgt ctcgacaaaa gaattatcag tggacattca
     551  cgatgccaca ggtaaggtat atctcccttt aatcactaga gaggagataa
     601  ataaaagact ttctagctta aaacctgaag tcagaaagat catgtccatg
     651  gttcatcttg gagcggtcaa aatattgctt aaagctcaat ttcgaaatgg
     701  gattgatacc ccaatcaaaa ttgctttaat cgatgataga attaattcta
     751  gaagagattg ccttctcggt gcagccaaag gtaatctagc atacggtaag
     801  tttatgttta ctgtataccc caagtttgga ataagcctta atacccaaag
     851  acttaaccaa accttaagcc ttattcatga ttttgagaat aaaaatctta
     901  tgaataaagg tgataaagtt atgaccataa cctatatcgt aggatatgca
     951  ttaactaata gtcatcatag catagattat caatcgaatg ctacaattga
    1001  actagaagac gtatttcaag aaattggaaa tgtccagcaa tctgactttt
    1051  gtacaataca aaatgacgaa tgcaattggg ccattgatat agcccaaaac
    1101  aaagccttat taggagctaa aacccaatcc caaattggta atagtcttca
    1151  aataggaaac agtgcttcat cctctaatac tgaaaatgaa ttagctaggg
    1201  taagccaaaa catagatctt ttaaaaaaca aattaaaaga gatctgtgga
    1251  gaataaaatg agcattacgg gtcaaccgca tgtttataaa aaggatacta
    1301  ttattagact aaaaccattg tctcttaata gtaataatag aagttatgtt
    1351  tttaattcct caaaagggaa cattcaaaat ataattaatc atcttaacaa
    1401  cctcaatgag attgtaggaa gaagcttact cggaatatgg aagatcaact
    1451  catacttcgg actaagcaaa gacccttcgg agtccaaatc aaaaaacccg
    1501  tcagttttta atactgcaaa aaccattttt aagagtaggg gggttgatta
    1551  ctcgag