Sequence of DPV Cucumber mosaic virus satellite RNA

Cucumber mosaic virus CARNA 5 gene with ORFs I, IIA, and IIB, 5' end, clone X7.

ACC No: M20355

Dated: 2000-03-04 | Length: 334 | CRC: 643218136

                !!NA_SEQUENCE 1.0
ID   CUMCVC04   standard; DNA; VRL; 334 BP.
XX
AC   M20355;
XX
SV   M20355.1
XX
DT   20-FEB-1989 (Rel. 18, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Cucumber mosaic virus CARNA 5 gene with ORFs I, IIA, and IIB, 5' end, clone
DE   X7.
XX
KW   .
XX
OS   cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-334
RX   MEDLINE; 88179532.
RA   Kaper J.M., Tousignant M.E., Steen M.T.;
RT   "Cucumber mosaic virus-associated RNA 5: XI. Comparison of 14 CARNA 5
RT   variants relates ability to induce tomato necrosis to a conserved
RT   nucleotide sequence";
RL   Virology 163:284-292(1988).
XX
DR   SPTREMBL; Q89492; Q89492.
DR   SPTREMBL; Q89720; Q89720.
DR   SPTREMBL; Q89918; Q89918.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .334
FT                   /db_xref="taxon:12305"
FT                   /organism="cucumber mosaic virus"
FT   CDS             11. .94
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89492"
FT                   /note="ORF I"
FT                   /protein_id="AAA46397.1"
FT                   /translation="MENCAEGLYLREDLSLGGVGYLPAKAG"
FT   CDS             98. .169
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89720"
FT                   /note="ORF IIA"
FT                   /protein_id="AAA46398.1"
FT                   /translation="MLPRTGDRWLASYVRYSQYYTLI"
FT   CDS             135. .299
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q89918"
FT                   /note="ORF IIB"
FT                   /protein_id="AAA46399.1"
FT                   /translation="MSATLSTTLSFEPPLSLLAEPGTWFADTMDFERNTLLGGMSHDAH
FT                   RERLRLMLC"
XX
SQ   Sequence 334 BP; 67 A; 83 C; 95 G; 89 T; 0 other;

 M20355  Length: 334  December 21, 2001 15:54  Type: N  Check: 4072  ..

       1  gttttgtttg atggagaatt gcgcagaggg gttatatctg cgtgaggatc
      51  tgtcactcgg cggtgtggga tacctccctg ctaaggcggg ttgagtgatg
     101  ctccctcgga ctggggaccg ctggcttgcg agctatgtcc gctactctca
     151  gtactacact ctcatttgag cccccgctca gtttgctagc agaacccggc
     201  acatggttcg ccgataccat ggatttcgaa agaaacactc tgttaggtgg
     251  tatgagtcat gacgcacaca gggagaggct aaggcttatg ctatgctgat
     301  ctccgtgaat gtctatcatt cctctgcagg accc