Sequence of DPV Lymphocytic choriomeningitis virus
Lymphocytic choriomeningitis virus envelope glycoprotein (GP-C) and nucleoprotein (NP) genes, complete cds.
ACC No: M20869
Dated: 2000-03-04 | Length: 3376 | CRC: -1060566969
!!NA_SEQUENCE 1.0
ID LCVGPNP standard; RNA; VRL; 3376 BP.
XX
AC M20869;
XX
SV M20869.1
XX
DT 20-FEB-1989 (Rel. 18, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE Lymphocytic choriomeningitis virus envelope glycoprotein (GP-C) and
DE nucleoprotein (NP) genes, complete cds.
XX
KW envelope protein; nucleoprotein.
XX
OS Lymphocytic choriomeningitis virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC 1-LCMV-LASV complex.
XX
RN [1]
RP 1-3376
RX MEDLINE; 88219540.
RA Salvato M., Shimomaye E., Southern P., Oldstone M.B.A.;
RT "Virus-lymphocyte interactions: IV. Molecular characterization of LCMV
RT Armstrong (CTL+) small genomic segment and that of its variant, clone 13
RT (CTL-)";
RL Virology 164:517-522(1988).
XX
DR SWISS-PROT; P09991; VGLY_LYCVA.
DR SWISS-PROT; P09992; NCAP_LYCVA.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3376
FT /db_xref="taxon:11623"
FT /organism="Lymphocytic choriomeningitis virus"
FT CDS 78. .1574
FT /codon_start=1
FT /db_xref="SWISS-PROT:P09991"
FT /note="envelope glycoprotein"
FT /protein_id="AAA46256.1"
FT /translation="MGQIVTMFEALPHIIDEVINIVIIVLIVITGIKAVYNFATCGIFA
FT LISFLLLAGRSCGMYGLKGPDIYKGVYQFKSVEFDMSHLNLTMPNACSANNSHHYISMG
FT TSGLELTFTNDSIISHNFCNLTSAFNKKTFDHTLMSIVSSLHLSIRGNSNYKAVSCDFN
FT NGITIQYNLTFSDRQSAQSQCRTFRGRVLDMFRTAFGGKYMRSGWGWTGSDGKTTWCSQ
FT TSYQYLIIQNRTWENHCTYAGPFGMSRILLSQEKTKFFTRRLAGTFTWTLSDSSGVENP
FT GGYCLTKWMILAAELKCFGNTAVAKCNVNHDAEFCDMLRLIDYNKAALSKFKEDVESAL
FT HLFKTTVNSLISDQLLMRNHLRDLMGVPYCNYSKFWYLEHAKTGETSVPKCWLVTNGSY
FT LNETHFSDQIEQEADNMITEMLRKDYIKRQGSTPLALMDLLMFSTSAYLVSIFLHLVKI
FT PTHRHIKGGSCPKPHRLTNKGICSCGAFKVPGVKTVWKRR"
FT variation 856
FT /note="t in ARM 53b; c in ARM 53b Clone 13"
FT variation 1298
FT /note="t in ARM 53b; c in ARM 53b Clone 13"
FT CDS complement(1639. .3315)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P09992"
FT /note="nucleoprotein"
FT /protein_id="AAA46257.1"
FT /translation="MSLSKEVKSFQWTQALRRELQSFTSDVKAAVIKDATNLLNGLDFS
FT EVSNVQRIMRKEKRDDKDLQRLRSLNQTVHSLVDLKSTSKKNVLKVGRLSAEELMSLAA
FT DLEKLKAKIMRSERPQASGVYMGNLTTQQLDQRSQILQIVGMRKPQQGASGVVRVWDVK
FT DSSLLNNQFGTMPSLTMACMAKQSQTPLNDVVQALTDLGLLYTVKYPNLNDLERLKDKH
FT PVLGVITEQQSSINISGYNFSLGAAVKAGAALLDGGNMLESILIKPSNSEDLLKAVLGA
FT KRKLNMFVSDQVGDRNPYENILYKVCLSGEGWPYIACRTSIVGRAWENTTIDLTSEKPA
FT VNSPRPAPGAAGPPQVGLSYSQTMLLKDLMGGIDPNAPTWIDIEGRFNDPVEIAIFQPQ
FT NGQFIHFYREPVDQKQFKQDSKYSHGMDLADLFNAQPGLTSSVIGALPQGMVLSCQGSD
FT DIRKLLDSQNRKDIKLIDVEMTREASREYEDKVWDKYGWLCKMHTGIVRDKKKKEITPH
FT CALMDCIIFESASKARLPDLKTVHNILPHDLIFRGPNVVTL"
XX
SQ Sequence 3376 BP; 868 A; 809 C; 748 G; 951 T; 0 other;
M20869 Length: 3376 September 18, 2002 10:52 Type: N Check: 8995 ..
1 cgcaccgggg atcctaggct ttttggattg cgctttcctc tagatcaact
51 gggtgtcagg ccctatccta cagaaggatg ggtcagattg tgacaatgtt
101 tgaggctctg cctcacatca tcgatgaggt gatcaacatt gtcattattg
151 tgcttatcgt gatcacgggt atcaaggctg tctacaattt tgccacctgt
201 gggatattcg cattgatcag tttcctactt ctggctggca ggtcctgtgg
251 catgtacggt cttaagggac ccgacattta caaaggagtt taccaattta
301 agtcagtgga gtttgatatg tcacatctga acctgaccat gcccaacgca
351 tgttcagcca acaactccca ccattacatc agtatgggga cttctggact
401 agaattgacc ttcaccaatg attccatcat cagtcacaac ttttgcaatc
451 tgacctctgc cttcaacaaa aagacctttg accacacact catgagtata
501 gtttcgagcc tacacctcag tatcagaggg aactccaact ataaggcagt
551 atcctgcgac ttcaacaatg gcataaccat ccaatacaac ttgacattct
601 cagatcgaca aagtgctcag agccagtgta gaaccttcag aggtagagtc
651 ctagatatgt ttagaactgc cttcgggggg aaatacatga ggagtggctg
701 gggctggaca ggctcagatg gcaagaccac ctggtgtagc cagacgagtt
751 accaatacct gattatacaa aatagaacct gggaaaacca ctgcacatat
801 gcaggtcctt ttgggatgtc caggattctc ctttcccaag agaagactaa
851 gttcttcact aggagactag cgggcacatt cacctggact ttgtcagact
901 cttcaggggt ggagaatcca ggtggttatt gcctgaccaa atggatgatt
951 cttgctgcag agcttaagtg tttcgggaac acagcagttg cgaaatgcaa
1001 tgtaaatcat gatgccgaat tctgtgacat gctgcgacta attgactaca
1051 acaaggctgc tttgagtaag ttcaaagagg acgtagaatc tgccttgcac
1101 ttattcaaaa caacagtgaa ttctttgatt tcagatcaac tactgatgag
1151 gaaccacttg agagatctga tgggggtgcc atattgcaat tactcaaagt
1201 tttggtacct agaacatgca aagaccggcg aaactagtgt ccccaagtgc
1251 tggcttgtca ccaatggttc ttacttaaat gagacccact tcagtgatca
1301 aatcgaacag gaagccgata acatgattac agagatgttg aggaaggatt
1351 acataaagag gcaggggagt acccccctag cattgatgga ccttctgatg
1401 ttttccacat ctgcatatct agtcagcatc ttcctgcacc ttgtcaaaat
1451 accaacacac aggcacataa aaggtggctc atgtccaaag ccacaccgat
1501 taaccaacaa aggaatttgt agttgtggtg catttaaggt gcctggtgta
1551 aaaaccgtct ggaaaagacg ctgaagaaca gcgcctccct gactctccac
1601 ctcgaaagag gtggagagtc agggaggccc agagggtctt agagtgtcac
1651 aacatttggg cctctaaaaa ttaggtcatg tggcagaatg ttgtgaacag
1701 ttttcagatc tgggagcctt gctttggagg cgctttcaaa aatgatgcag
1751 tccatgagtg cacagtgcgg ggtgatctct ttcttctttt tgtcccttac
1801 tattccagta tgcatcttac acaaccagcc atatttgtcc cacactttgt
1851 cttcatactc cctcgaagct tccctggtca tttcaacatc gataagctta
1901 atgtccttcc tattctgtga gtccagaagc tttctgatgt catcggagcc
1951 ttgacagctt agaaccatcc cctgcggaag agcacctata actgacgagg
2001 tcaacccggg ttgcgcattg aagaggtcgg caagatccat gccgtgtgag
2051 tacttggaat cttgcttgaa ttgtttttga tcaacgggtt ccctgtaaaa
2101 gtgtatgaac tgcccgttct gtggttggaa aattgctatt tccactggat
2151 cattaaatct accctcaatg tcaatccatg taggagcgtt ggggtcaatt
2201 cctcccatga ggtcttttaa aagcattgtc tggctgtagc ttaagcccac
2251 ctgaggtgga cctgctgctc caggcgctgg cctgggtgaa ttgactgcag
2301 gtttctcgct tgtgagatca attgttgtgt tttcccatgc tctccccaca
2351 atcgatgttc tacaagctat gtatggccat ccttcacctg aaaggcaaac
2401 tttatagagg atgttttcat aagggttcct gtccccaact tggtctgaaa
2451 caaacatgtt gagttttctc ttggccccga gaactgcctt caagaggtcc
2501 tcgctgttgc ttggcttgat caaaattgac tctaacatgt tacccccatc
2551 caacagggct gcccctgcct tcacggcagc accaagacta aagttatagc
2601 cagaaatgtt gatgctggac tgctgttcag tgatgacccc cagaactggg
2651 tgcttgtctt tcagcctttc aagatcatta agatttggat acttgactgt
2701 gtaaagcaag ccaaggtctg tgagcgcttg tacaacgtca ttgagcggag
2751 tctgtgactg tttggccata caagccatag ttagacttgg cattgtgcca
2801 aattgattgt tcaaaagtga tgagtctttc acatcccaaa ctcttaccac
2851 accacttgca ccctgctgag gctttctcat cccaactatc tgtaggatct
2901 gagatctttg gtctagttgc tgtgttgtta agttccccat atatacccct
2951 gaagcctggg gcctttcaga cctcatgatc ttggccttca gcttctcaag
3001 gtcagccgca agagacatca gttcttctgc actgagcctc cccactttca
3051 aaacattctt ctttgatgtt gactttaaat ccacaagaga atgtacagtc
3101 tggttgagac ttctgagtct ctgtaggtct ttgtcatctc tcttttcctt
3151 cctcatgatc ctctgaacat tgctgacctc agagaagtcc aacccattca
3201 gaaggttggt tgcatcctta atgacagcag ccttcacatc tgatgtgaag
3251 ctctgcaatt ctcttctcaa tgcttgcgtc cattggaagc tcttaacttc
3301 cttagacaag gacatcttgt tgctcaatgg tttctcaaga caaatgcgca
3351 atcaaatgcc taggatccac tgtgcg