Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus - PAV Australia PAV coat protein and unknown protein genes, complete cds.

ACC No: M21347

Dated: 2006-02-27 | Length: 603 | CRC: 2002788262

                
ID   M21347     standard; genomic RNA; VRL; 603 BP.
XX
AC   M21347;
XX
SV   M21347.1
XX
DT   22-APR-1989 (Rel. 19, Created)
DT   27-FEB-2006 (Rel. 86, Last updated, Version 5)
XX
DE   Barley yellow dwarf virus - PAV Australia PAV coat protein and unknown
DE   protein genes, complete cds.
XX
KW   coat protein; open reading frame.
XX
OS   Barley yellow dwarf virus - PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RX   PUBMED; 3388774.
RA   Miller W.A., Waterhouse P.M., Kortt A.A., Gerlach W.L.;
RT   "Sequence and identification of the barley yellow dwarf virus coat protein
RT   gene";
RL   Virology 165(1):306-309(1988).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /db_xref="taxon:12040"
FT                   /mol_type="genomic RNA"
FT                   /organism="Barley yellow dwarf virus - PAV"
FT                   /isolate="Australia PAV"
FT                   /clone="pPA[8,259]"
FT                   /clone="G16"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /db_xref="GOA:P09510"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/Swiss-Prot:P09510"
FT                   /product="coat protein"
FT                   /protein_id="AAA87366.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANFVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASANTAGAIFIELDTACKQSALGSYINSFTISKTASKTFRSEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
FT   CDS             44. .505
FT                   /codon_start=1
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/Swiss-Prot:P09513"
FT                   /note="17kDa ORF; putative"
FT                   /product="unknown protein"
FT                   /protein_id="AAA87367.1"
FT                   /translation="MAQEGGAVEQFGQWLWSNPIEQDPDDEMVDAREEEGQILYLDQQA
FT                   GLRYSYSQLTTLKPTPPGQSNSAPVYRNAQRFQTEYSSPTIVTRSQVSELSLSHTRPPI
FT                   RQALSLLSSTPRASNQPWVATLIPSPSARPPPRPSGQRQLMGRNSRNQR"
XX
SQ   Sequence 603 BP; 179 A; 151 C; 148 G; 125 T; 0 other;

m21347 Length: 603  27-FEB-2006  Type: N  Check: 8970  ..

       1  atgaattcag taggtcgtag aggacctaga cgcgcaaatc aaaatggcac
      51  aagaaggagg cgccgtagaa cagttcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgcaaggg aagaggaggg
     151  gcaaattttg tatttagacc aacaggcggg actgaggtat tcgtattctc
     201  agttgacaac cttaaagcca actcctccgg ggcaatcaaa ttcggcccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatactcaa gtcctaccat
     301  cgttacaaga tcacaagtat ccgagttgag tttaagtcac acgcgtccgc
     351  caatacggca ggcgctatct ttattgagct cgacaccgcg tgcaagcaat
     401  cagccctggg tagctacatt aattccttca ccatcagcaa gaccgcctcc
     451  aagaccttcc ggtcagaggc aattaatggg aaggaattcc aggaatcaac
     501  gatagaccaa ttttggatgc tctacaaggc caatggaact accactgaca
     551  cggcaggaca atttatcatt acgatgagtg tcagtttgat gacggccaaa
     601  tag