Sequence of DPV Influenza C virus

Influenza C/JJ/50 polymerase 1 (PB1, segment 2) RNA, complete cds.

ACC No: M28060

Dated: 2000-03-04 | Length: 2363 | CRC: 1438184399

                !!NA_SEQUENCE 1.0
ID   ORFLCPB1   standard; RNA; VRL; 2363 BP.
XX
AC   M28060;
XX
SV   M28060.1
XX
DT   02-FEB-1990 (Rel. 22, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza C/JJ/50 polymerase 1 (PB1, segment 2) RNA, complete cds.
XX
KW   polymerase.
XX
OS   Influenzavirus C
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae.
XX
RN   [1]
RP   1-2363
RX   MEDLINE; 89348004.
RA   Yamashita M., Krystal M., Palese P.;
RT   "Comparison of the three large polymerase proteins of influenza A, B, and C
RT   viruses";
RL   Virology 171:458-466(1989).
XX
DR   SWISS-PROT; P19703; RRP1_INCJJ.
XX
CC   Draft entry and computer-readable sequence for [1] kindly submitted
CC   by J.M.E.Leiter, 18-SEP-1989.  Coding region assigned by comparison
CC   with PB1 proteins of Influenza types A and B.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2363
FT                   /db_xref="taxon:11552"
FT                   /organism="Influenzavirus C"
FT   CDS             18. .2282
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P19703"
FT                   /note="polymerase 1"
FT                   /protein_id="AAA43814.1"
FT                   /translation="MEINPYLMFLNNDVTSLISTTYPYTGPPPMSHGSSTKYTLETIKR
FT                   TYDYSRTSVEKTSKVFNIPRRKFCNCLEDKDDLVKPTGNVDISSLLGLAEMMEKRMGEG
FT                   FFKHCVMEAETEILKMHFSRLTEGRQTYDWTSERNMPAATALQLTVDAIKETEGPFKGT
FT                   TMLEYCNKMIEMLDWKEVKFRKVKTMVRREKDKRSGKEIKTKVPVMGIDSIKHDEFLIR
FT                   ALTINTMAKDGERGKLQRRAIATPGMIVRPFSKIVETVAQKICEKLKESGLPVGGNEKK
FT                   AKLKTTVTSLNARMNSDQFAVNITGDNSKWNECQQPEAYLALLAYITKDSSDLMKDLCS
FT                   VAPVLFCNKFVKLGQGIRLSNKRKTKEVIIKAEKMGKYKNLMREEYKNLFEPLEKYIQK
FT                   DVCFLPGGMLMGMFNMLSTVLGVSTLCYMDEELKAKGCFWTGLQSSDDFVLFAVASNWS
FT                   NIHWTIRRFNAVCKLIGINMSLEKSYGSLPELFEFTSMFFDGEFVSNLAMELPAFTTAG
FT                   VNEGVDFTAAMSIIKTNMINNSLSPSTALMALRICLQEFRATYRVHPWDSKVKGGRMKI
FT                   INEFIKTIESKDGLLIADGGKLMNNISTLHIPEEVLKFEKMDEQYRNRVFNPKNPFTNF
FT                   DKTIDIFRAHGPIRVEENEAVVSTHSFRTRANRTLLNTDMRAMMAEEKRYQMVCDIFKS
FT                   VFESADINPPIGAMSIGEAIEEKLLERAKMKRDIGAIEDSEYEEIKDIIRDAKKARIES
FT                   R"
XX
SQ   Sequence 2363 BP; 893 A; 356 C; 488 G; 626 T; 0 other;

M28060  Length: 2363  September 18, 2002 10:52  Type: N  Check: 4999  ..

       1  agcagaagca ggggattatg gaaatcaacc catatttgat gtttctaaac
      51  aacgacgtta catcgctgat atcaacaaca tacccctata cagggccacc
     101  tccaatgtca catggatcat caaccaaata cactttggaa actattaaaa
     151  gaacatatga ctactcaaga acatcagttg aaaaaacatc gaaggttttc
     201  aatataccaa gaagaaagtt ttgcaattgt cttgaagaca aagatgattt
     251  ggtaaaacca acaggaaacg ttgatatcag ttccttgttg ggccttgcag
     301  agatgatgga gaaaagaatg ggagaaggat tttttaagca ttgtgtaatg
     351  gaggcagaaa cagaaatact taaaatgcac ttctctagac ttacggaagg
     401  aagacaaaca tatgattgga cttctgaaag aaacatgcca gcggccactg
     451  ctttgcaact gacagttgat gccataaaag aaacagaagg accatttaaa
     501  gggacaacaa tgcttgaata ttgcaataaa atgatagaaa tgcttgattg
     551  gaaagaagtt aaattcagaa aagtcaaaac aatggtgaga agggagaaag
     601  ataaaagaag tgggaaggag ataaaaacta aagtacctgt aatgggaatt
     651  gactcaatta aacatgatga gtttttaatt agagcattaa ctattaatac
     701  catggccaaa gatggggaaa gagggaaatt gcaaagaaga gcaattgcaa
     751  cacccggtat gatagtaaga ccattttcaa aaattgttga aactgtagca
     801  cagaaaatat gtgagaaatt gaaagaaagc ggtctacctg ttggtggtaa
     851  tgagaagaaa gcaaaactta agaccactgt tacttctctc aatgccagga
     901  tgaacagtga tcagtttgca gttaatataa ctggagacaa tagtaaatgg
     951  aatgaatgcc aacaacctga ggcttattta gcacttttgg cttacatcac
    1001  caaagactcc tctgatttaa tgaaagactt atgcagtgtt gctccagtgc
    1051  ttttctgtaa taagtttgtg aaacttggac aaggaataag actttcaaat
    1101  aaaagaaaaa caaaggaagt cataataaaa gctgagaaaa tgggaaaata
    1151  caagaatcta atgagagaag aatataaaaa cctttttgaa cccttagaaa
    1201  aatatattca gaaggatgtc tgttttttac ctggaggaat gcttatggga
    1251  atgttcaaca tgctgtcaac agttcttgga gtaagtacat tatgttatat
    1301  ggatgaagaa ctaaaagcca aaggatgttt ttggactgga ctccaatctt
    1351  ctgatgactt tgttcttttt gcagttgctt caaactggtc aaatatacat
    1401  tggacaataa gacggtttaa tgctgtatgc aagttaattg gtataaacat
    1451  gtctcttgaa aaatcgtatg gttctctccc agaactcttt gaatttacaa
    1501  gtatgttctt tgatggagaa tttgtgtcca atcttgctat ggaattgcca
    1551  gctttcacta ctgcaggagt taatgaagga gttgatttta cagctgcaat
    1601  gtcaattatt aagacaaata tgataaataa cagcttatca ccttctactg
    1651  ctttaatggc cttaaggata tgtctccaag aatttagagc gacttataga
    1701  gtccatcctt gggattcaaa agtgaaaggt gggagaatga aaataataaa
    1751  tgagttcata aaaaccatag aaagtaaaga tggattatta attgctgatg
    1801  gtgggaaact gatgaacaac attagcaccc ttcatattcc tgaggaagta
    1851  ctgaagtttg aaaaaatgga tgaacaatat agaaataggg tattcaaccc
    1901  caaaaatccc tttactaact ttgacaaaac tatcgatata tttagagcac
    1951  atggcccaat aagggttgaa gaaaatgaag cagtagtttc aactcatagc
    2001  ttcagaacca gagcaaacag aaccctattg aatacagata tgagagcaat
    2051  gatggcagaa gagaaaagat atcaaatggt ttgcgacata tttaaaagcg
    2101  tgtttgaatc agcggacata aatcctccaa ttggggctat gagcattgga
    2151  gaggccatag aagagaaact attagagaga gctaaaatga aaagagacat
    2201  tggggcaata gaagattcag aatatgaaga aataaaagac attataaggg
    2251  atgcaaagaa agctagaatt gaaagtagat gaggaggggc tgttaaaccc
    2301  tttcctccta cttgcacata tttttgttat tccattaaat gaaaaaatcc
    2351  ccttgctact gct