Sequence of DPV Influenza C virus

Influenza C/JJ/50 polymerase 2 (PB2, segment 1) RNA, complete cds.

ACC No: M28061

Dated: 2000-03-04 | Length: 2365 | CRC: 1141837613

                !!NA_SEQUENCE 1.0
ID   ORFLCPB2   standard; RNA; VRL; 2365 BP.
XX
AC   M28061;
XX
SV   M28061.1
XX
DT   02-FEB-1990 (Rel. 22, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza C/JJ/50 polymerase 2 (PB2, segment 1) RNA, complete cds.
XX
KW   polymerase.
XX
OS   Influenzavirus C
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae.
XX
RN   [1]
RP   1-2365
RX   MEDLINE; 89348004.
RA   Yamashita M., Krystal M., Palese P.;
RT   "Comparison of the three large polymerase proteins of influenza A, B, and C
RT   viruses";
RL   Virology 171:458-466(1989).
XX
DR   SWISS-PROT; P13877; RRP3_INCJJ.
XX
CC   Draft entry and computer-readable  sequence [1] kindly submitted by
CC   J.M.E.Leiter., 18-SEP-1989. Coding region assigned by comparison
CC   with PB2 proteins of Influenza types A and B.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2365
FT                   /db_xref="taxon:11552"
FT                   /organism="Influenzavirus C"
FT   CDS             22. .2346
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P13877"
FT                   /note="polymerase 2"
FT                   /protein_id="AAA43815.1"
FT                   /translation="MSLLLTIAKEYKRLCQDAKAAQMMTVGTVSNYTTFKKWTTSRKEK
FT                   NPSLRMRWAMSSKFPIIANKRMLEEAQIPKEHNNVALWEDTEDVSKRDHVLASTSCINY
FT                   WNFCGPCANNSEVIKEVYKSRFGRLERRKEIMWKELRFTLVDRQRRRVDTQPVEQRLRT
FT                   GEIKDLQMWTLFEDEAPLASKFILDNYGLVKEMRSKFANKPLNKEVVAHMLEKQFNPES
FT                   RFLPVFGAIRPERMELIHALGGETWIQEANTAGISNVDQRKNDMRAVCRKVCLAANASI
FT                   MNAKSKLVEYIKSTSMRIGETERKLEELILETDDVSPEVTLCKSALGGPLGKTLSFGPM
FT                   LLKKISGSGVKVKDTVYIQGVRAVQFEYWSEQEEFYGEYKSATALFSRKERSLEWITIG
FT                   GGINEDRKRLLAMCMIFCRDGDYFKDAPATITMADLSTKLGREIPYQYVMMNWIQKSED
FT                   NLEALLYSRGIVETNPGKMGSSMGIDGSKRAIKSLRAVTIQSGKIDMPESKEKIHLELS
FT                   DNLEAFDSSGRIVATILDLPSDKKVTFQDVSFQHPDLAVLRDEKTAITKGYEALIKRLG
FT                   TGDNDIPSLIAKKDYLSLYNLPEVKLMAPLIRPNRKGVYSRVARKLVSTQVTTGHYSLH
FT                   ELIKVLPFTYFAPKQGMFEGRLFFSNDSFVEPGVNNNVFSWSKADSSKIYCHGIAIRVP
FT                   LVVGDEHMDTSLALLEGFSVCENDPRAPMVTRQDLIDVGFGQKVRLFIGQGSVRTFKRT
FT                   ASQRAASSDVNKNVKKIKMSN"
XX
SQ   Sequence 2365 BP; 887 A; 363 C; 509 G; 606 T; 0 other;

M28061  Length: 2365  September 18, 2002 10:52  Type: N  Check: 1404  ..

       1  agcagaagca ggggattgga aatgtctctt ctattgacaa tagcaaagga
      51  atacaaaaga ctatgccaag atgctaaggc agctcaaatg atgacagtag
     101  gaactgtatc aaactacact acgttcaaga aatggactac atcaaggaag
     151  gaaaagaatc cttcactaag aatgagatgg gcaatgagca gcaaattccc
     201  aataatagct aacaagagaa tgctggaaga agctcaaatt cctaaagaac
     251  acaacaatgt agccctttgg gaagacacag aagatgtttc aaaaagggat
     301  catgttcttg caagcacctc ttgtataaat tattggaatt tttgtggacc
     351  ttgtgccaac aattcagaag tgatcaaaga agtttataaa tctagatttg
     401  gaagattaga aagaaggaaa gaaataatgt ggaaagaact tagatttaca
     451  ttagttgata gacaacgaag aagagttgac actcagcctg tagaacaaag
     501  attgagaact ggagaaatta aagacttgca aatgtggact ttgttcgaag
     551  atgaagctcc tcttgctagc aaatttattt tagacaatta tggtctagtc
     601  aaagaaatga gatcaaagtt tgcaaacaaa cctctgaata aagaagtagt
     651  tgcacacatg ttagaaaaac aattcaatcc ggaaagtaga ttcttgcctg
     701  ttttcggagc tataaggcca gaaagaatgg aattgatcca tgcattagga
     751  ggagaaactt ggatacaaga agctaacact gcagggattt ccaatgttga
     801  tcaaaggaaa aatgatatga gagcagtatg taggaaagtt tgtcttgcag
     851  caaatgcaag tataatgaac gccaaaagca aactggttga gtatataaaa
     901  agtacaagta tgagaattgg agaaacagaa agaaagcttg aagaacttat
     951  acttgaaacc gatgatgtct cacctgaagt aacattatgt aaatctgctt
    1001  taggaggacc attaggaaaa actctatctt ttgggcccat gctactcaag
    1051  aaaatttctg gttccggagt aaaagttaaa gatacagtat atatccaagg
    1101  tgtcagagca gtacaatttg aatactggag tgagcaagaa gaattctatg
    1151  gagaatataa gtcagccacc gctttattca gcagaaagga aagatcacta
    1201  gaatggatta caataggagg aggaataaat gaagacagaa agagacttct
    1251  agctatgtgc atgatatttt gcagagatgg agattatttt aaagacgccc
    1301  ctgcaacaat aacaatggca gatttaagta cgaagttagg aagagaaatt
    1351  ccatatcaat atgtgatgat gaattggata caaaaatcag aagataatct
    1401  cgaagcctta ttatacagta ggggaattgt agaaaccaat ccaggaaaaa
    1451  tggggagctc aatgggaatt gatggttcca aaagagcaat taaatcttta
    1501  agggctgtca caatacaatc aggaaagatt gacatgccag aatcaaaaga
    1551  aaaaattcac cttgagctct ctgataatct tgaagcattt gattcatcag
    1601  gaagaattgt tgcaacaatt ttagaccttc ctagtgacaa aaaggtaaca
    1651  tttcaggatg taagctttca acatcctgat ctggcagtat tgagagatga
    1701  gaaaacggcc ataacaaaag ggtatgaagc gctaatcaaa aggctaggaa
    1751  caggggacaa tgatattcct tccttaattg caaagaagga ttatttgtct
    1801  ctttataatt taccagaagt aaaattaatg gctcccttaa tcagacccaa
    1851  tagaaaagga gtctattcca gagttgctag aaaattagtg tctacacaag
    1901  ttactactgg acattattca ttacatgaat tgataaaggt cttacccttt
    1951  acttatttcg ccccaaaaca gggaatgttt gaaggaaggc ttttctttag
    2001  caacgatagc tttgttgagc ctggagtaaa taacaatgta ttttcttgga
    2051  gtaaggctga cagttctaaa atatattgtc atggaatagc gataagggta
    2101  cctttagttg ttggagatga acacatggac acttcgttag cactattaga
    2151  agggtttagt gtttgtgaaa acgaccccag agcaccaatg gtaacaagac
    2201  aagatttaat tgatgtggga tttgggcaaa aagttagact cttcataggc
    2251  caagggagcg ttagaacctt caagcgaact gcctcacaaa gggctgcatc
    2301  aagcgatgta aataagaatg tgaaaaagat aaagatgtct aactaaaaat
    2351  cctcttgcta ctgct