Sequence of DPV Squash leaf curl virus
Squash leaf curl virus circular viral A component DNA.
ACC No: M38183
Dated: 2005-04-17 | Length: 2634 | CRC: -829055662
!!NA_SEQUENCE 1.0
ID GESQLCVEA standard; circular genomic DNA; VRL; 2634 BP.
XX
AC M38183;
XX
SV M38183.1
XX
DT 08-MAY-1991 (Rel. 28, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE Squash leaf curl virus circular viral A component DNA.
XX
KW .
XX
OS Squash leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2634
RX MEDLINE; 91082449.
RX PUBMED; 1984668.
RA Lazarowitz S.G., Lazdins I.B.;
RT "Infectivity and complete nucleotide sequence of the cloned genomic
RT components of a bipartite squash leaf curl geminivirus with a broad host
RT range phenotype.";
RL Virology 180(1):58-69(1991).
XX
CC Draft entry and computer-readable sequence for [Virology (1990) In
CC press] kindly submitted
CC by S.G.Lazarowitz, 27-AUG-1990.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2634
FT /db_xref="taxon:10829"
FT /mol_type="genomic DNA"
FT /note="A component"
FT /organism="Squash leaf curl virus"
FT CDS 385. .1140
FT /codon_start=1
FT /db_xref="GOA:P27444"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/Swiss-Prot:P27444"
FT /note="AR1 capsid; putative"
FT /protein_id="AAC32411.1"
FT /translation="MVKRDAPWRLMAGTSKVSRSANFSPREGMGPKFNKAAAWVNRPMY
FT RKPRIYRTMRGPDIPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATI
FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(1137. .1541)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="InterPro:IPR008973"
FT /db_xref="UniProt/Swiss-Prot:P29049"
FT /note="AL3; putative"
FT /protein_id="AAC32412.1"
FT /translation="MVMDLRTWDDITVHQAENSVFIWEVPNPLYFKMYXVEDPLYTHTR
FT IYHIQIRFNHNLRRALNLHKAFLNFQVWTESIRASGTTYLNRFRHLVMLYLDRLGVIGL
FT NNVIRAVSWATDRSYVNYVLENHEIKFKIY"
FT CDS complement(1282. .1677)
FT /codon_start=1
FT /db_xref="GOA:P27445"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/Swiss-Prot:P27445"
FT /note="AL2; putative"
FT /protein_id="AAC32413.1"
FT /translation="MPNSSSSKVPSIKAQHRIAKKRAVRRRRIDLDCGCSIYIHINCAK
FT DGNGFTHMGRHHCASGREFRFYLGGSKSPLFQDVQXGGSTLHAHKDIPHTNPVQPQPEE
FT STKSSQSVPELPSLDGIDSSFWDDIFE"
FT CDS join(complement(1619. .2634),complement(1. .>31))
FT /codon_start=1
FT /db_xref="GOA:P29048"
FT /db_xref="HSSP:1L5I"
FT /db_xref="UniProt/Swiss-Prot:P29048"
FT /note="AL1; putative"
FT /protein_id="AAC32410.1"
FT /translation="NMPRNPNSFRLTARNIFLTYPRCDVPKEEVLEMLLHLSWSVVKPN
FT YVRVAREEHSDGSPHLHCLIQLSGKSNIKDAGFFDLTHPRRSARFHPNIQAAKDTNAVK
FT NYITKEGDYCESGQYKVSGGSKSNKDDVYHNAVNAGSAGEALDIIKAGDPKTFIVNYHN
FT LLANVERLFQKPPEPWVPPFELSSFTSVPEELQDWADDYFNECSAAARPTSIIIEGGSR
FT TGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKHWKELIGAQRDW
FT QSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENSALREWTEKNAKFIFLEGPL
FT YQSTAQDC"
XX
SQ Sequence 2634 BP; 703 A; 587 C; 592 G; 751 T; 1 other;
M38183 Length: 2634 May 10, 2005 10:09 Type: N Check: 4537 ..
1 aacgaaagga attagggttt cgtggcatat ttcgtaaata tgcatcggga
51 caccaggagg tgtcctctca actttctcat attgctggtg tcctggtgtc
101 ctatatatac ctcaagacac ataaagcctc taggggacac caaggggcaa
151 aatcggccat ccgcaataat attaccggat ggccgcccgt ttttggtgtc
201 ctctacttta gcccacgggg caggcccagg cccaaatcaa ccacaacctt
251 tttttatttt atgggaccac tttaattatt ccaaccaacc acgttccgcc
301 tgacgagtct aataataatg ccttggtgac taagtgtggt ccctataaat
351 aaagctgaca tatcccatac ctctttaatt caaaatggtt aagagagatg
401 ccccatggcg tttaatggcg gggacctcaa aggtctcacg ctctgctaac
451 ttttcgcctc gtgaaggtat gggcccaaaa ttcaacaagg ccgctgcatg
501 ggttaacagg cccatgtaca ggaagcccag gatctatcgc acaatgagag
551 gcccagacat ccccaaggga tgtgaggggc catgcaaggt tcagtcttac
601 gagcagcggc atgatatctc tcatcttggc aaggtaatgt gtatttctga
651 cgtgacgcgt ggtaatggca ttactcaccg cgtcggcaag cgcttttgtg
701 ttaagtctgt atatatttta ggcaagatat ggatggacga aaatatcaag
751 ttgaagaatc acacgaacag tgtgatgttt tggttagttc gagaccgtag
801 accatatggc actcctatgg atttcggcca ggtgttcaat atgttcgaca
851 acgagcccag tacggcaact atcaagaacg atctacgtga tcgttatcaa
901 gtcatgcaca ggttctacgc gaaggtcact ggtggtcagt atgcgagcaa
951 cgaacaagcc ttggttaggc gtttctggaa ggtcaacaac catgttgtgt
1001 ataaccacca ggaagccggg aaatacgaga atcatacgga gaacgctctg
1051 ttattgtata tggcatgtac tcatgcctct aaccctgtat atgcgacatt
1101 gaaaattcgg atctattttt atgattcgat aacaaattaa taaattttga
1151 attttatttc atgattctcg agtacataat ttacatatga acggtctgtt
1201 gcccaagata cagctcgtat aacgttattg agaccaataa ctcctaacct
1251 atctaagtac aacataacta aatgcctaaa tctattcaaa tatgtcgtcc
1301 cagaagctcg aatcgattcc gtccagactt ggaagttcag gaacgctttg
1351 tgaagattta gtgctctcct caggttgtgg ttgaaccgga tttgtatgtg
1401 gtatatcctt gtgtgcgtgt agagtggatc ctccacnttg tacatcttga
1451 aatagagggg atttggaacc tcccaaataa aaacggaatt ctctgcctga
1501 tgcacagtga tgtcgtccca tgtgcgtaaa tccattacca tctttggcgc
1551 agttgatatg aatgtatatg gaacagccac agtctaagtc gattcttcga
1601 cgacgaacag ctctcttttt agcaatcctg tgctgtgctt tgatagaggg
1651 gaccttcgag gaagatgaat ttggcatttt tttcagtcca ctctcttaga
1701 gccgagttct cggctttgtc gaggaaatct ttataactgg acccctctcc
1751 aggattgcac agcacgattg atgggattcc acctttaatt tgaaccggct
1801 ttccatattt acagttggac tgccagtccc tttgggcccc aatcaattcc
1851 ttccagtgct ttagctttag gtaatgcgga gcgacgtcat caatgacgtt
1901 atacttgacg tcatttgaga aaaccctaga attgaaatca agatggccgc
1951 tcaagtaatt atgtgggcct aacgacctag cccacattgt cttgcccgtt
2001 cttgaaccac cttctatgat tatactagtt ggccttgccg cagcggaaca
2051 ctcattaaaa taatcatcag cccaatcttg taactcttct ggaactgacg
2101 tgaacgaaga gagctcaaac ggaggaaccc acggttccgg aggtttctga
2151 aataatctct cgacgttagc taataaattg tgataattaa cgataaacgt
2201 ctttggatca ccagctttta taatgtcgag agcttctccc gcactacctg
2251 cattaacggc attgtgatat acgtcgtctt tgtttgactt tgaaccccca
2301 gacactttat attgcccgga ttcacaataa tcaccttctt tggtgatgta
2351 gttcttgacg gcgttggtgt ctttggcagc ctgaatgttt gggtgaaatc
2401 gggcagaccg tctggggtga gtgaggtcga aaaatccagc atccttgatg
2451 ttggattttc cagataattg aatgaggcag tgtaagtgcg gagacccgtc
2501 ggaatgttcc tctctggcga ctctaacgta attcggtttg acgaccgacc
2551 acgagagatg cagaagcatc tcaagaactt cttctttggg aacatcgcac
2601 cttggataag ttaagaatat gtttctggca gtta