Sequence of DPV Cowpea chlorotic mottle virus
Cowpea chlorotic mottle virus (CCMV) 1a protein gene, complete cds.
ACC No: M65139
Dated: 2000-03-04 | Length: 3171 | CRC: 2129604103
!!NA_SEQUENCE 1.0
ID MCCP1A standard; RNA; VRL; 3171 BP.
XX
AC M65139;
XX
SV M65139.1
XX
DT 01-AUG-1991 (Rel. 28, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 5)
XX
DE Cowpea chlorotic mottle virus (CCMV) 1a protein gene, complete cds.
XX
KW 1a protein; 3A gene; coat protein.
XX
OS Cowpea chlorotic mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Bromovirus.
XX
RN [1]
RP 1-3171
RX MEDLINE; 92074218.
RA Dzianott A.M., Bujarski J.J.;
RT "The nucleotide sequence and genome organization of the RNA-1 segment in
RT two bromoviruses: Broad bean bottle virus and cowpea chlorotic mottle
RT virus";
RL Virology 185:553-562(1991).
XX
DR SWISS-PROT; P27752; V1A_CCMV.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3171
FT /db_xref="taxon:12303"
FT /organism="Cowpea chlorotic mottle virus"
FT CDS 71. .2947
FT /codon_start=1
FT /db_xref="SWISS-PROT:P27752"
FT /product="1a protein"
FT /protein_id="AAA46369.1"
FT /translation="MASSLDLLKLISERGADSRGASDIVEQQAVKQLLEQVDYSKRSKK
FT INIRNKLTPDEENAFRARYGGAFDLNLTQQYNAPHSLAGALRIAEHYDCLSSFPPLDPI
FT IDFGGSWWHHYSRKDTRIHSCCPVLGVRDAARHEERLCRMRKLLQECDDREDLPDFCID
FT RAESCSVQADWAICIHGGYDMGYTGLCEAMHSHGVRILRGTIMFDGAMLFDNEGVLPLL
FT KCRWMKSGKGKSEVIKFDFMNESTLSYIHSWTNLGSFLTESVHVIGGTTYLLERELLKC
FT NIMTYKIVATNLKCPKETLRHCVWFENISQYVAVNIPEDWNLTHWKPVRVAKTTVREVE
FT EIAFRCFKENKEWTENMKAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMN
FT LYQKYENIRNFYSEMEWKGWVNHFKTRFWWGGSTATSSTGKIREFLAGKFPWLRLDSYK
FT DSFVFLSKISDVKEFENDSVPISRLRSFFSSEDLMERIELELESAQKRRREKKKKEVEK
FT IDEEEFQDAIDIPNDAVRDDAKPEKEPKPEVTVGAEPTGPEEASRHFAIKEFSDYCRRL
FT DCNAVSNLRRLWAIAGCDGRTARNKSILETYHRVDDMINLHYPGGQWLYPKKYDYEVGF
FT NDSGLGPKFDDELYVVDKSCICANYQVLSKNTDSLKAPSCKISLCDGVAGCGKTTAIKS
FT ASNIAEHLVVTANKKSAEDVREALFPHNPSSEIAFKVIRTADSALMHGLPRCKRLLVDE
FT AGLLHYGQLLAVAALCKCQSVLAFGDTEQISFKSRDATFRLKYGDLQFDSRDIVTETWR
FT CPQDVISAVQTLKRGGNRTSKYLGWKSHSKVSRSISHKEIASPLQVTLSREKFYLTMTQ
FT ADKAALVSRAKDFPELDKAWIEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKTEEYCL
FT VALTRHKITFEYLYVGMLSGDLIFRSIS"
XX
SQ Sequence 3171 BP; 878 A; 604 C; 776 G; 913 T; 0 other;
M65139 Length: 3171 December 21, 2001 15:56 Type: N Check: 6870 ..
1 gtaatccacg agaacgaggt tcaatccctt gtcgactcac ggagtatcga
51 acttttctta attttattta atggcaagtt ctttagatct tttgaaattg
101 atttctgaga gaggcgctga cagccgaggc gcttcggaca tagttgaaca
151 acaagctgta aagcaattgc ttgagcaagt tgactactcg aaaaggtcca
201 agaaaatcaa tattagaaat aaactcacgc ccgatgaaga gaatgctttc
251 cgggcgcgct atggaggagc ttttgatttg aacttaactc aacaatataa
301 tgctccccat agtttggctg gagctctgcg aatagcggag cattatgact
351 gtctttcaag cttcccccct cttgatccca tcattgattt tggtggttct
401 tggtggcatc attattccag gaaggacaca cgtattcaca gttgttgtcc
451 cgtgttgggc gtcagagatg ctgctcgaca tgaagaacga ctatgtagaa
501 tgcgtaagtt gttacaagag tgtgacgaca gagaagatct accagatttc
551 tgtattgata gagctgaatc ctgcagtgtc caggctgatt gggccatatg
601 tattcatggt ggttatgaca tgggttacac aggtctatgt gaagctatgc
651 attcccacgg ggtgcgtatt ttgcggggta ctattatgtt cgacggtgct
701 atgttgtttg acaacgaagg cgttttacct ttgttgaagt gccgttggat
751 gaagtctggg aaaggtaaat ctgaggtcat taaatttgat ttcatgaatg
801 agagcacact ttcttatatt cattcttgga ccaatcttgg ttcatttttg
851 actgagtctg tgcatgtgat aggaggtact acttatctcc tagaacgtga
901 gctcttaaaa tgcaatatta tgacctataa aatcgttgcc acaaatctga
951 agtgtcctaa ggaaacgttg cgacattgtg tttggtttga gaatatttcc
1001 caatatgtcg ccgttaacat tcctgaagac tggaatctga ctcattggaa
1051 acccgtacgt gtggcaaaaa ccaccgtaag agaggttgaa gagattgctt
1101 ttcgatgttt taaggagaat aaagagtgga cggagaatat gaaagcgata
1151 gcatctattc tgtccgctaa atcttctaca gtcattatca acggtcaagc
1201 tatcatggcc ggagagaggc tgaacattga tgagtatcat ctcgtcgcct
1251 ttgctctcac tatgaatttg tatcagaaat atgaaaatat tcggaatttt
1301 tatagtgaga tggaatggaa gggctgggtc aaccacttta aaactagatt
1351 ttggtgggga ggaagtacgg ctacctcaag cactggtaag attcgagagt
1401 ttctggctgg taaattccct tggctgaggt tagattcgta caaagacagt
1451 tttgtttttc tgtcgaagat ctctgatgtc aaagagtttg agaacgattc
1501 tgttcccatc tccagactga ggagtttctt cagcagtgag gacctcatgg
1551 agcgcattga attagagctt gaatctgcgc aaaagcgtcg tcgggaaaag
1601 aaaaagaaag aggtcgaaaa aatcgatgag gaggaatttc aagatgccat
1651 cgatatcccg aatgatgccg tcagagatga cgctaaacct gaaaaggagc
1701 ctaaaccgga agtgaccgtt ggagctgaac caacaggccc cgaagaggca
1751 tcgagacact ttgccatcaa ggaattctct gattattgtc gtcgccttga
1801 ctgtaacgct gtgtcaaatc ttcgtcgttt atgggccatt gctggctgcg
1851 atgggaggac tgcgagaaat aagtcgatcc ttgaaactta tcatagggtt
1901 gacgatatga tcaatttgca ctatcctggg ggtcaatggt tgtaccccaa
1951 gaaatacgac tatgaagtgg gtttcaatga ctcgggctta ggtccgaagt
2001 ttgatgatga gctttatgtc gttgacaaat catgtatatg tgcgaattat
2051 caggtgctga gcaaaaatac agatagctta aaagcacctt cttgcaaaat
2101 ctcgttgtgt gacggagttg ctggatgcgg gaagaccaca gcaattaaat
2151 ccgcgtccaa catagctgag cacctagtgg taactgctaa caagaagtcc
2201 gctgaagacg tcagggaggc tctattccct cataatccat cgtctgagat
2251 agcgttcaag gttataagga cggcagactc tgctttaatg catggtttac
2301 cgcgatgtaa gcgcttattg gtcgatgaag ctgggctact acactatggt
2351 cagctgctcg ctgtggctgc tctctgtaag tgtcagtctg ttcttgcatt
2401 cggagacacg gagcaaattt cttttaaatc gcgagatgca actttccgcc
2451 tgaaatatgg tgatttgcag tttgacagtc gcgatattgt tacggagaca
2501 tggagatgtc cgcaagatgt tatttccgca gttcagactc tgaaaagagg
2551 cgggaacagg acctccaaat atttgggttg gaaatcccat tctaaagtat
2601 ccaggagcat tagtcataaa gaaatagcat cacctttaca ggtgacgctt
2651 tcaagggaaa aattctattt gacaatgact caggctgata aagccgccct
2701 tgtttccagg gctaaggatt tcccagagct tgataaggcc tggattgaga
2751 aacatataaa aaccgttcat gaggctcaag gtgtgtcagt agatcacgct
2801 gtattggtaa gacttaaatc taccaagtgt gatctattta aaactgaaga
2851 atattgcttg gtggctttga ctcgacataa gattaccttt gagtatcttt
2901 atgttggtat gctatcaggt gatttaatat ttagaagtat atcttgatcc
2951 tgagtgtgat tcacttacga atcagttcta acggtttcta taaaccgtag
3001 tcgtcgttgc gacgccgacc gtcttacaag acgttcgagc tgcctttggg
3051 ttttactcct tgaacccttc agaagaattc ttcggagttc gtaccagtat
3101 ctcacatagt gaggtgataa gactggtggg cagtgcctag tcgaaagact
3151 aggtgatctc taaggagacc a