Sequence of DPV Bean golden mosaic virus
Bean golden mosaic virus-[Brazil] coat protein (AR1), AL3 protein (AL3), AL2 protein (AL2), and putative replicative protein (AL1) genes, complete cds.
ACC No: M88686
Dated: 2005-04-17 | Length: 2617 | CRC: -1156665436
!!NA_SEQUENCE 1.0
ID GEMBGARAL standard; circular genomic DNA; VRL; 2617 BP.
XX
AC M88686;
XX
SV M88686.1
XX
DT 20-MAY-1992 (Rel. 31, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 9)
XX
DE Bean golden mosaic virus-[Brazil] coat protein (AR1), AL3 protein (AL3),
DE AL2 protein (AL2), and putative replicative protein (AL1) genes, complete
DE cds.
XX
KW .
XX
OS Bean golden mosaic virus-[Brazil]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2617
RA Gilbertson R.L., Faria J.C., Ahlquist P.G., Maxwell D.P.;
RT "Genetic diversity in geminiviruses causing bean golden mosaic disease: The
RT nucleotide sequence of the infectious cloned DNA components of a Brazilian
RT isolate of bean golden mosaic geminivirus";
RL Unpublished.
XX
RN [2]
RP 1-2617
RA Gilbertson R.L., Faria J.C., Hanson S.F., Morales F.J., Ahlquist P.G.,
RA Maxwell D.P., Russell D.R.;
RT "Cloning of the complete DNA genomes of four bean-infecting geminiviruses
RT and determining their infectivity by electric discharge particle
RT acceleration";
RL Phytopathology 81:980-985(1991).
XX
RN [3]
RP 1-2617
RA Gilbertson R.L., Hidayat S.H., Martinez R.T., Leong S.A., Faria J.C.,
RA Morales F.J., Maxwell D.P.;
RT "Differentiation of bean-infecting geminiviruses by nucleic acid
RT hybridization probes and aspects of bean golden mosaic in Brazil";
RL Plant Dis. 75:336-342(1991).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2617
FT /db_xref="taxon:222444"
FT /mol_type="genomic DNA"
FT /note="ICTV7 type accession"
FT /organism="Bean golden mosaic virus-[Brazil]"
FT /strain="Type I"
FT /isolate="Brazil"
FT /dev_stage="replicative form"
FT /segment="A"
FT CDS join(complement(1556. .2617),complement(1. .24))
FT /codon_start=1
FT /db_xref="GOA:Q67574"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q67574"
FT /function="viral replication"
FT /gene="AL1"
FT /product="putative replicative protein"
FT /protein_id="AAA46312.1"
FT /translation="MPPPKRFKINAKNYFLTYPQCSITKESAIEQLQNLQTPVNKKYIR
FT ICREIHENGEPHLHALIQFEGKFQCTNCRVFDLKHPTTSSVSHANIQSAKSSSDVKSYI
FT EKDGDYIEWGHFQVDGRSARGGQQTANDAASEALNASSKEEAMQIIKEKLPEKFLFQYH
FT NLSSNLDRIFTKAPDPWSPPYHLSSFTNVPREMQEWADDYFGRGAAARPERPISIIIEG
FT DSRTGKTMWARALGTHNYLSGHLDFNSKVFSNHAEYNVIDDIAPHYLKLKHWKELMGAQ
FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKCFLDKEENAALKNWTIHNAKFIFLN
FT SPLYQSSTQSCEETSNQTTSR"
FT misc_feature 1. .181
FT /note="putative common region"
FT /function="putative origin of replication"
FT CDS 358. .1113
FT /codon_start=1
FT /db_xref="GOA:Q67575"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q67575"
FT /note="putative"
FT /gene="AR1"
FT /product="coat protein"
FT /protein_id="AAA46313.1"
FT /translation="MPKRDAQWRHMGGTSKISRSANFSPRGGNGPKYNKAAEWVNRPMY
FT RKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(1110. .1508)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q67576"
FT /note="putative"
FT /gene="AL3"
FT /product="AL3 protein"
FT /protein_id="AAA46314.1"
FT /translation="MDSRTGERITARQAENGVYIWEISNPLYFKMYNVEDLQYTTTRVY
FT HLQIRFNHNLRNKLGLHKAFLNFQVWTISLQASGTTYLNRFKYLVLLYLDRIGVISLNN
FT VIRAVRFATDKSYVNYVLENHEIKYKFY"
FT CDS complement(1255. .1644)
FT /codon_start=1
FT /db_xref="GOA:Q67577"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q67577"
FT /note="putative"
FT /gene="AL2"
FT /product="AL2 protein"
FT /protein_id="AAA46315.1"
FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRVDLECGCTIYVHINCSG
FT HGFTHRGTHHCTSSGEWRVYLGDIKSPLFQDVQRRGSTIHNDQSIPPPNTVQPQPQEQT
FT GSTQGFPEFPSLDDISSSFWDDIFK"
XX
SQ Sequence 2617 BP; 677 A; 491 C; 592 G; 857 T; 0 other;
M88686 Length: 2617 May 10, 2005 10:09 Type: N Check: 2237 ..
1 tttaaaacgc tttggtggtg gcatacttgt aaataagagg gtgtaccccg
51 attgagctct cgttcaaaag tctctatgaa tcggtgtaat ggtgccaata
101 tatagtaaga agttctttaa ggatctgtag acacgtggcg gccatccgct
151 ataatattac cggatggccg cgcgattttt tttaaggccc attcttgttg
201 ggccgcttgg gcctttcttt atttgaatta aagtaaagtc atttattgtg
251 accaataact tttgtgctga cgggtttagt taattttgaa cttgtcgccc
301 aagttcttta ctaaactata aatttaatgt tgaattgacc atatgcttta
351 attcaaaatg cctaagcgtg atgctcaatg gcgccatatg ggaggtacgt
401 caaaaattag ccgttctgct aatttttctc ctcgtggggg taatgggcct
451 aaatacaaca aggccgccga atgggtaaat aggcctatgt acaggaagcc
501 caggatatat cgaacgttac gaggccctga cgttccacgg ggctgtgaag
551 gcccgtgtaa ggtacagtcc tatgaacaac gacatgatgt ctctcatgtt
601 gggaaggtta tgtgtgtatc tgatgtgacg agaggtaatg gtattaccca
651 tcgtgtagga aaacgttttt gtgttaagtc tgtttatatt ttaggtaaga
701 tatggatgga cgaaaatatc aagttgaaga atcacacgaa cagtgtgatg
751 ttttggttag tgagagatcg tagaccgtat ggtactccta tggactttgg
801 tcaagttttt aatatgtttg acaatgaacc cagtactgct actgttaaga
851 acgatcttcg tgatcgtttt caagttatgc ataagttcta tggaaaggta
901 acaggtggac aatatgctag caacgagcag gcattggtca agcgtttttg
951 gaaggtgaat aactatgtag tttacaatca tcaagaagca gggaagtacg
1001 agaatcatac ggagaacgct ttattattgt atatggcatg tactcatgcc
1051 tcaaatcccg tgtatgctac tctaaaaatt cggatctatt tttatgattc
1101 gatcaccaat taataaaatt tatattttat ttcatgattc tcaagtacat
1151 aatttacata tgatttatct gttgcgaaac gtacagctct gattacattg
1201 ttaagcgaaa tgacacctat tctatctaaa tacaatagca ctaaatattt
1251 aaatctattt aaatatgtcg tcccagaagc ttgaagagat atcgtccaga
1301 cttggaaatt caggaaagcc ttgtgtagac ccagtttgtt cctgaggttg
1351 tggttgaacc gtatttggag gtggtatact ctggtcgttg tgtattgtag
1401 atcctctacg ttgtacatct tgaaataaag gggatttgat atctcccaga
1451 tatacacgcc attctccgct tgacgtgcag tgatgcgttc ccctgtgcgt
1501 gaatccatgt cctgagcaat ttatgtgtac gtaaattgtg cagccgcact
1551 ctaaatcaac gcgacgtcgt ctgattgctc gtttcttcgc agctctgtgt
1601 tgaactttga tagagggggg agttgaggaa gatgaatttc gcattatgga
1651 ttgtccagtt tttaagagct gcgttttcct ctttgtcgag gaaacattta
1701 taactggctc cttcacctgg attgcaaagc acgattgatg ggattccacc
1751 tttaatttga acgggtttcc cgtatttgca gtttgattgc cagtcctttt
1801 gagctcccat caattccttc cagtgcttta actttagata gtgcggtgcg
1851 atgtcatcaa tgacgttata ctcagcatga tttgaaaaca cctttgagtt
1901 gaaatccagg tgaccactta aataattgtg ggtccctaat gcacgtgccc
1951 acattgtctt ccccgttcgt gaatcacctt cgatgatgat actaataggt
2001 ctctccggcc gcgcagcggc acctctcccg aaataatcat ctgcccattc
2051 ttgcatctct ctcggtacgt tagtaaaaga ggagaggtga tacggaggtg
2101 accacggatc cggagctttt gtgaatattc tatccaggtt actggataaa
2151 ttgtgatatt ggaagagaaa cttttccggt agtttctctt tgattatttg
2201 catggcttct tcctttgaag aagcattcaa tgcttcggat gccgcatcat
2251 tagctgtctg ttgacctcct ctagcagatc ttccgtcgac ttgaaaatga
2301 ccccattcga tgtaatcacc gtctttctcg atgtaggact tgacatcaga
2351 ggatgatttt gcactctgta tattggcatg ggagacggaa gatgttgttg
2401 ggtgtttgag gtcgaacact ctgcaattcg tgcactggaa cttgccttcg
2451 aattggataa gagcatgcag atgtggttcc ccattctcgt gaatttctct
2501 gcaaattctg atgtatttct tgttcaccgg tgtttgtagg ttttgaagtt
2551 gttcaattgc actctctttt gtaattgaac attgtgggta tgtgaggaaa
2601 taattctttg cgtttat