Sequence of DPV Potato leafroll virus

Potato leaf roll virus coat protein and 17kD protein RNA, complete cds's.

ACC No: M89926

Dated: 2000-03-04 | Length: 1127 | CRC: 1250221044

                !!NA_SEQUENCE 1.0
ID   PLVCOAPRO  standard; RNA; VRL; 1127 BP.
XX
AC   M89926;
XX
SV   M89926.1
XX
DT   29-MAR-1992 (Rel. 31, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Potato leaf roll virus coat protein and 17kD protein RNA, complete cds's.
XX
KW   17 kDa protein; coat protein.
XX
OS   Potato leaf roll virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
XX
RN   [1]
RP   1-1127
RA   Griffin J.D., Gunasinghe U.B., Berger P.H.;
RT   "Sequence of a cDNA clone of potato leafroll virus isolate Prosser LR7
RT   containing the coat protein gene";
RL   Unpublished.
XX
DR   SPTREMBL; Q84827; Q84827.
DR   SPTREMBL; Q84828; Q84828.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1127
FT                   /db_xref="taxon:12045"
FT                   /organism="Potato leaf roll virus"
FT                   /isolate="LR7"
FT   misc_feature    247. .443
FT                   /note="intergenic region; putative"
FT   CDS             444. .1070
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q84827"
FT                   /note="putative"
FT                   /product="coat protein"
FT                   /gene="coat protein"
FT                   /protein_id="AAA46870.1"
FT                   /translation="MSTVVVKGNVNGGVQQPRRRRRQSLARRANRVQPVVMVTAPGQPR
FT                   RRRRRRGGNRRSRKTGVPRGRGSSETFVFTKDNLVGNSQGSFTFGPSLSDCPAFKDGIL
FT                   KAYHEYKITSILLQFVSEASSTSAGSIAYELDPHCKISSLQSYVNKFQITKGGAKTYQA
FT                   RMINGVEWHDSSEDQCRILWKGNGKSSDPAGSFRVTIRVALQNPK"
FT   CDS             469. .939
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q84828"
FT                   /note="putative"
FT                   /product="17 kD protein"
FT                   /gene="17 kD protein"
FT                   /protein_id="AAA46871.1"
FT                   /translation="MSMVVYNNQEGEEGNPLPGALTEYSQWLWSRPLGNPGAEDAEEEA
FT                   IAAQEKLEFPEDEAQARHSCLQRTTSWATPKEVSPSGRVYQTVRHSRMEYSRPTMSIRS
FT                   QVSYFSSSARPLPPPPAPSLMSWTPIAKYHPSSPTSTSSKLRRAALKPIKRG"
XX
SQ   Sequence 1127 BP; 323 A; 297 C; 259 G; 248 T; 0 other;

M89926  Length: 1127  December 21, 2001 15:56  Type: N  Check: 9140  ..

       1  gtaggtcgag aactcgaatt ctgttcacac atcttcagaa atccgaccct
      51  cgccgttccg gtcaacacca acaaaatgct ttacaagttg atccatggtt
     101  ataatccgga atgtggcaac ccagaagtga ttcaaaacta tctggctgca
     151  gtattctctg tgctgcagga actccgacac gatcgtgagc tcgttgccaa
     201  gctccaccag tggttggttc cgagtgccac cacaaaagaa cactgaagga
     251  gctcactata actagccaag catacgcgag ttgcaagcat tggaagttta
     301  agcctcgtta catcaaccgg acaaaataga ttataaattc ttagcaggat
     351  ttgctttagg attctcatcc gcaatcccat tttcagtagc cggtttatat
     401  ttagtttacc taaagatttc ctcccacgtg cgatcaattg ttaatgagta
     451  cggtcgtggt taaaggaaat gtcaatggtg gtgtacaaca accaagaagg
     501  cgaagaaggc aatcccttgc caggcgcgct aacagagtac agccagtggt
     551  tatggtcacg gcccctgggc aacccaggcg ccgaagacgc agaagaggag
     601  gcaatcgccg ctcaagaaaa actggagttc cccgaggacg aggctcaagc
     651  gagacattcg tgtttacaaa ggacaacctc gtgggcaact cccaaggaag
     701  tttcaccttc gggccgagtc tatcagactg tccggcattc aaggatggaa
     751  tactcaaggc ctaccatgag tataagatca caagtatctt acttcagttc
     801  gtcagcgagg cctcttccac ctccgccggc tccatcgctt atgagttgga
     851  cccccattgc aaaatatcat ccctccagtc ctacgtcaac aagttccaaa
     901  ttacgaaggg cggcgctaaa acctatcaag cgcggatgat aaacggggta
     951  gaatggcacg attcgtctga ggatcagtgc cggatactgt ggaaaggaaa
    1001  tggaaaatct tcagaccccg caggatcttt tagagtcacc atcagagtgg
    1051  ctctgcaaaa ccccaaatag gtagactccg gatcagagcc tggtccaagc
    1101  ccacaaccaa cacccactcc aactccc