Sequence of DPV Cauliflower mosaic virus

Cauliflower mosaic virus DNA sequence, ORFs I, II, and VII.

ACC No: M94887

Dated: 2006-11-14 | Length: 1692 | CRC: 943216658

                
ID   M94887; SV 1; linear; genomic DNA; STD; VRL; 1692 BP.
XX
AC   M94887;
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DT   06-JUN-1992 (Rel. 32, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 4)
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DE   Cauliflower mosaic virus DNA sequence, ORFs I, II, and VII.
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KW   .
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OS   Cauliflower mosaic virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
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RN   [1]
RP   1-1692
RX   PUBMED; 1519358.
RA   Qiu S.G., Schoelz J.E.;
RT   "Three regions of cauliflower mosaic virus strain W260 are involved in
RT   systemic infection of solanaceous hosts";
RL   Virology 190(2):773-782(1992).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1692
FT                   /organism="Cauliflower mosaic virus"
FT                   /strain="W260"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10641"
FT   CDS             58. .348
FT                   /codon_start=1
FT                   /note="ORF VII"
FT                   /db_xref="UniProtKB/TrEMBL:Q83180"
FT                   /protein_id="AAA46362.1"
FT                   /translation="MNRSMTKTQEDKTSPKYQRVLNSKDKRSFKIKNSSLTPVTDRFTT
FT                   VRFQNNIECVYANFDSQLKSSYDGRSKKIKNLSLKNLRCYEAFLRKYLLEQ"
FT   CDS             409. .1392
FT                   /codon_start=1
FT                   /note="ORF I"
FT                   /db_xref="GOA:Q01089"
FT                   /db_xref="InterPro:IPR001022"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q01089"
FT                   /protein_id="AAA46363.1"
FT                   /translation="MDLYPEENTQSEQSHNSENNMQIFKSENSDGFSSDLMISNDQLKN
FT                   ISKTQLTLEKEKIFKMPNVLSQVMKKAFSRKNEILYCVSTKELSVDIHDATGKVYLPLI
FT                   TKEEINKRLSSLKPEVRRTMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSRKDC
FT                   LLGAAKGNLAYGKFMFTVYPKFGISLNTQRLNQTLSLIHDFENKNLMNKGDKVMTITYI
FT                   VGYALTNSHHSIDYQSNATIELEDVFQEIGNVQQSEFCTIQNDECNWAIDIAQNKALLG
FT                   AKTKSQIGNSLQIGNSASSSNTENELARVSQNIDLLKNKLKEICGE"
FT   CDS             1394. .1692
FT                   /partial
FT                   /codon_start=1
FT                   /note="ORF II"
FT                   /db_xref="GOA:Q01087"
FT                   /db_xref="InterPro:IPR004917"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q01087"
FT                   /protein_id="AAA46364.1"
FT                   /translation="MSITGQPHVYKKDTIIRLKPLSLNSNNRSYVLVPQKGNIQNIINH
FT                   LNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSGGVDYS"
XX
SQ   Sequence 1692 BP; 643 A; 307 C; 286 G; 456 T; 0 other;

m94887 Length: 1692  14-NOV-2006  Type: N  Check: 6204  ..

       1  atcgatttaa agaaataatc cgcataagcc cccgcttaaa aaattggtat
      51  cagagccatg aataggtcta tgaccaaaac tcaagaggat aaaacctcac
     101  caaaatacca aagagttctt aactctaaag ataaaagatc tttcaagatc
     151  aaaaatagtt ccctcacacc ggtgaccgac aggtttacca ccgtaaggtt
     201  tcagaacaac atcgaatgcg tttacgccaa cttcgactct cagctcaagt
     251  cgtcgtacga tggtagatct aaaaagatca agaatctaag ccttaaaaat
     301  cttagatgct acgaagcctt cctcaggaag taccttctgg aacaataaat
     351  ctctctgaga atagtactct aacgagtatc cacagataaa ataatcttct
     401  gtgttgagat ggatttgtat ccagaggaaa atacccaaag cgagcaatcg
     451  cataattctg aaaataatat gcaaatattt aaatcagaaa attcggatgg
     501  attctcttcc gatctaatga tctcaaacga tcaattaaaa aatatctcta
     551  aaacccaatt gacattggag aaagaaaaga tatttaaaat gcctaacgtt
     601  ttatctcaag ttatgaaaaa agcgtttagc aggaaaaacg agatacttta
     651  ctgcgtctcg acaaaagaat tatcggtgga cattcacgat gccacaggta
     701  aggtatatct tcctttaatc actaaagagg agataaataa aagactttcc
     751  agcttaaaac ctgaagtcag aagaaccatg tccatggtcc acttgggcgc
     801  ggttaaaata ttgcttaaag ctcaatttcg aaatgggatt gataccccaa
     851  tcaaaattgc tttaatcgat gatagaatca attctagaaa agattgcctt
     901  ctcggtgcag ccaaaggtaa tctagcatac ggtaagttta tgtttactgt
     951  ataccccaag tttggaataa gccttaatac ccaaagactt aaccaaaccc
    1001  taagccttat tcatgatttt gagaataaaa atcttatgaa taaaggtgat
    1051  aaagttatga ccataaccta tattgtagga tatgcattaa ccaatagtca
    1101  tcatagcata gattatcaat cgaatgctac aattgaacta gaagacgtat
    1151  ttcaagaaat tggaaatgtc cagcaatctg agttctgtac aatacagaat
    1201  gatgaatgca attgggccat tgatatagcc caaaacaaag ccttattagg
    1251  agctaaaacc aaatcccaaa ttggtaatag tcttcaaata ggaaacagtg
    1301  cttcatcctc taatactgaa aatgaattag ctagggtaag ccagaacata
    1351  gatcttttaa agaataaatt aaaagaaatc tgtggagaat aatatgagca
    1401  ttacgggtca accgcatgtt tataaaaaag atactattat tagactaaaa
    1451  ccattgtctc ttaatagtaa taatagaagt tatgttttag ttcctcaaaa
    1501  agggaatatt caaaatataa ttaatcatct taacaacctc aatgagattg
    1551  taggaagaag cttactcgga atatggaaga tcaactcata cttcggacta
    1601  agcaaagacc cttcggagtc caaatcaaaa aacccgtcag tttttaatac
    1651  tgcaaaaacc atttttaaga gtgggggggt tgattactcg ag