Sequence of DPV Maize stripe virus
RNA4: NCP=non-capsid protein, NS4=non-structural protein NS4 [maize stripe virus MStV, Genomic RNA Complete, 2227 nt].
ACC No: S40180
Dated: 2004-09-01 | Length: 2227 | CRC: 880417881
!!NA_SEQUENCE 1.0
ID S40180 standard; genomic RNA; VRL; 2227 BP.
XX
AC S40180;
XX
SV S40180.1
XX
DT 16-FEB-1993 (Rel. 34, Created)
DT 01-SEP-2004 (Rel. 81, Last updated, Version 5)
XX
DE RNA4: NCP=non-capsid protein, NS4=non-structural protein NS4 [maize stripe
DE virus MStV, Genomic RNA Complete, 2227 nt].
XX
KW .
XX
OS Maize stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RC GenBank staff at the National Library of Medicine created this entry [NCBI
RC gibbsq 108785] from the original journal article.
RP 1-2227
RX MEDLINE; 92333241.
RX PUBMED; 1629690.
RA Huiet L., Tsai J.H., Falk B.W.;
RT "Complete sequence of maize stripe virus RNA4 and mapping of its subgenomic
RT RNAs";
RL J. Gen. Virol. 73(Pt 7):1603-1607(1992).
XX
CC Region: RNA4.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2227
FT /db_xref="taxon:12330"
FT /mol_type="genomic RNA"
FT /organism="Maize stripe virus"
FT gene 63. .593
FT /gene="NCP"
FT CDS 63. .593
FT /codon_start=1
FT /db_xref="UniProt/Swiss-Prot:P22175"
FT /note="non-capsid protein"
FT /product="NCP"
FT /gene="NCP"
FT /protein_id="AAB22541.1"
FT /translation="MQRSADVSIGPITGLNYTDLYDSLPSSVSDNITLLDLKEPERVTE
FT ATKKLILKGCVETAYHHPLETDPLFASVHKHLPDFCHSFLEHLLGGEQDENSLIDIGEF
FT FKLLQPSLGDWITKYYLKHPNKMSGIQIKTLLNQIINMAKAESSDTETYEKVWKKMPSY
FT FSIVLTPLLHKVV"
FT gene complement(1326. .2177)
FT /gene="NS4"
FT CDS complement(1326. .2177)
FT /codon_start=1
FT /db_xref="GOA:P33521"
FT /db_xref="UniProt/Swiss-Prot:P33521"
FT /note="non-structural protein NS4;
FT mismatches(7,8,9,10,12,14,15,16,17,18,19,20,21,22,23,24,
FT 25)"
FT /product="NS4"
FT /gene="NS4"
FT /protein_id="AAB22542.2"
FT /translation="MALMKLFSRSNGKVLVDDLSEEGQKRLDLANNKKKLLSARPLTKG
FT RMSIDQAATVLGLEPFSFADIKVNKYDMFTAKQDYSIKANRVATFCIAVDPFWFHKPLT
FT YYPFFRIATFAMVWIGVKGRAAGTTTLKIIDKSYVDPQDQVEVEVTYPICKNFAVLGSL
FT PNFLALEDKTNLRVSVSIQGATVQNCVISRALWFWGIERTDLPVSMKTTDTVMFEFEPL
FT EDFNVNHLSSFSKFTTNVVQKAVGGAFVTKSFPELDSQKEFGVVKQPKKIPIMKPKRSI
FT FD"
XX
SQ Sequence 2227 BP; 740 A; 431 C; 372 G; 684 T; 0 other;
S40180 Length: 2227 September 7, 2004 08:32 Type: N Check: 2848 ..
1 acacaaagtc cagggcattt tacaatattc tattcaatcc actatcatcg
51 aaggtacaag atatgcagcg ctcagcagat gtttccattg gccctattac
101 aggcctgaat tatacagatc tatatgattc actccctagt agtgttagtg
151 acaatatcac tcttctagat ctgaaggaac cagagagagt cacagaggca
201 acaaagaagc taattctaaa aggatgtgtt gagactgctt atcatcatcc
251 tctagagact gatcctttat ttgcttctgt gcacaagcat ttaccagatt
301 tttgtcattc atttctggag caccttcttg gaggagaaca agatgaaaat
351 tcacttattg acattggaga gttcttcaaa ctcttacaac catcccttgg
401 agattggatc acaaaatatt atttgaagca tccaaacaag atgtctggaa
451 ttcaaataaa aactctgtta aatcaaatca ttaatatggc aaaggcagag
501 agttcagaca ctgaaactta tgagaaggtg tggaagaaaa tgccatctta
551 cttttccatt gtcttgactc cgctacttca caaagtagta tagctgagaa
601 ggagaaaaat cttgtgcaaa gacaaattct actttgtcat atgtacacat
651 tagagtatat ataagataaa gtatatatgt gtataagggt atgtttacac
701 atgcttgtct acatatatat atatatatat atatacatat atatgttcac
751 atatatatat atatatatat atatatatat atatatatat atacatgtat
801 aaatatgcac atatggtcct gtgggtgtgt ttacatattt ataaactcat
851 ttatgtaagt acctacgcac acaccattac attaatgtga atgtgtgagt
901 tagtgtgctt gttgtgttta catttctgtt cttctactac cagaagaaga
951 tgagaaaaga aaagagagaa gcacttacag tggtcaacca ccagaacata
1001 agcgcactta tacttattac atgcataaaa aaacaaaaac aatcaaactg
1051 tgctaggcac aacatccgga tgtggtgcgt agattttttc tacatagata
1101 tatagatata tatatatata tatatatata tatacacata catatccata
1151 ttatctaaga ctaaaactct agtctctgag aatggcactt agtaccatga
1201 taatagaaca aatcaaaatg aacaaagaca acaaaccaat taagattaat
1251 catagattaa tcttccttga cctagcacag gccagtataa ttccacaaca
1301 atctttcacc aagagatatc ttgacttagt caaagatgga tctcttaggt
1351 ttcattattg ggattttctt cggttgcttg acaaccccga attccttctg
1401 gctgtctagc tcagggaagc tctttgtaac aaaagcacca ccaacagctt
1451 tctgtaccac attagtggta aatttgctaa aacttgacag atggttcaca
1501 ttgaaatctt ctaatggttc aaactcgaac attacagtat ccgttgtttt
1551 cattgacact ggaagatctg tcctctcaat tccccagaac cacaatgctc
1601 tggagataac acaattctgt acagtcgctc cttgaataga gactgatact
1651 ctcagattcg ttttatcctc taaagctagg aaattcggaa gagatcctaa
1701 gaccgcaaag tttttgcaaa tgggataagt cacctctacc tccacttggt
1751 cttgtgggtc tacataagat ttatcaataa tctttagagt tgtagtccca
1801 gcagcccttc ctttcacacc tatccaaacc attgcaaatg tggcaatcct
1851 gaagaatgga taataagtga gaggcttgtg aaaccaaaat ggatcaacag
1901 ctatgcagaa agttgctact ctattagctt tgatagagta gtcctgcttt
1951 gcagtaaaca tgtcatactt gtttaccttt atatcagcaa aactaaatgg
2001 ctccaaacca aggacagttg ctgcttggtc tattgacatc ctcccttttg
2051 tgagaggacg agcagatagt agcttcttct tgttgttagc aagatctagc
2101 ctcttctgtc cctcctcaga taaatcatcc accaaaacct taccattcga
2151 tctggagaaa agtttcatca gagccatagt tgagtcgaaa atatacgata
2201 tcacaatgat atgccctgac tttgtgt