Sequence of DPV Oliveros virus
Oliveros virus glycoprotein precursor and nucleocapsid protein genes, complete cds.
ACC No: U34248
Dated: 2000-03-04 | Length: 3535 | CRC: 2112576025
ID U34248; SV 1; linear; genomic RNA; STD; VRL; 3535 BP.
XX
AC U34248;
XX
DT 27-MAY-1996 (Rel. 47, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
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DE Oliveros virus glycoprotein precursor and nucleocapsid protein genes,
DE complete cds.
XX
KW .
XX
OS Oliveros virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-3535
RX DOI; 10.1006/viro.1996.0124.
RX PUBMED; 8599223.
RA Bowen M.D., Peters C.J., Mills J.N., Nichol S.T.;
RT "Oliveros virus: a novel arenavirus from Argentina";
RL Virology 217(1):362-366(1996).
XX
RN [2]
RP 1-3535
RA Bowen M.D., Peters C.J., Mills J.N., Nichol S.T.;
RT ;
RL Submitted (17-AUG-1995) to the EMBL/GenBank/DDBJ databases.
RL Michael D. Bowen, Special Pathogens Branch, DVRD/NCID, Centers for Disease
RL Control and Prevention, 1600 Clifton Rd. N.E., Atlanta, GA 30333, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3535
FT /organism="Oliveros virus"
FT /chromosome="small RNA"
FT /strain="3229-1"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:42764"
FT CDS 117. .1673
FT /codon_start=1
FT /product="glycoprotein precursor"
FT /note="processed to yield G1 and G2 glycoproteins"
FT /db_xref="GOA:Q84168"
FT /db_xref="InterPro:IPR001535"
FT /db_xref="UniProtKB/TrEMBL:Q84168"
FT /protein_id="AAC54654.1"
FT /translation="MGQVIGFFQSLPNIINEALNIALICVALIAILKGIVNIWKSGLIQ
FT LFIFLILAGRSCSHTFQIGRNHEFQSITLNFTQFLGYAPSSCSVNNTHHYFRGPGNVSW
FT GIELTLTNNSVINASNSLKVFTNIHHNITNCVQNIDEQDHLMKWLIETMHLQIMKPGKR
FT LPPILCEKDKGLLIEYNLTNIASREEKHSEYWSQLLYGLSKLLGSSKSLWFDYCQRADC
FT MMQEHSSHLKCNYSECSGHTTFKYLILQNTTWENHCEFNHLNTIHLLMSSTGQSFITRR
FT LQAFLTWTLSDATGNDLPGGYCLEQWAIVWAGIKCFGNTAVAKCNQNHDSEFCDMLRLF
FT DYNRNAIKSLNDQSQSRLNLLTNTINSLISDNLLMKNKLAEIMNIPYCNYTKFWYINDT
FT RTGRHTLPQCWLISNGSYLNETKFRTQWLSESNALYTEMLTEDYDKRQGSTPLSLVDLC
FT FWSTLFYVTTLFAHLVGFPTHRHILDGPCPKPHRLTKKGICSCGHFGIPGKPVRWVKRS
FT R"
FT misc_structure 1685. .1723
FT /note="intergenic region hairpin structure 1"
FT misc_structure 1727. .1763
FT /note="intergenic region hairpin structure 2"
FT CDS complement(1771. .3447)
FT /codon_start=1
FT /product="nucleocapsid protein"
FT /db_xref="GOA:Q84169"
FT /db_xref="InterPro:IPR000229"
FT /db_xref="InterPro:IPR001998"
FT /db_xref="UniProtKB/TrEMBL:Q84169"
FT /protein_id="AAC54655.1"
FT /translation="MSGASDIPSFRWTQSLRRGLSHYTTQTKGDVLRDAKSLVDGLDFS
FT QVSQVQRVMRKERRSDDDLLKLRDLNKAVDGLMMMRNKQSNVSLKVGGLSKDELMELAT
FT DLEKLKRKINTNERSTPGVYQGNLTTAQLDRRSAILRSLGFQSRQGQNNGVVRIWDIKD
FT QKQLINQFGSMPALTIACMSVQGAEQMNDVVQGLTTLGLLYTVKYPNLDDLEKLSAEHT
FT CLQFITREESANNISGYNLSLAAAVKAGACLVDGGNMLETIYVKPDVFADIIKSLLRVK
FT HQERMFVSEKPGMRNPYENILYKICLSGEGWPYIGSRSQITGRAWDNTTIDFSKDVMYG
FT PPPPVKNGGNIRLNPLTDTQEAVIKEAISKLNPDETIWVDIEGPPTDPVELALYQPTTG
FT YYIHCFRLPHDEKGFKNGSKYSHGILLRDIENARSGLLSRILIKLPSKLVLTCQGSDDI
FT KKLMELNGRPDISTIDLSFPTDQARFYESVVWEKFGSLCTKHNGVVLSRKKKGGNSGEP
FT HCALLDCLMFQAAFEGNVPSIEPKPLLPSALVFKSESVVAM"
XX
SQ Sequence 3535 BP; 958 A; 825 C; 744 G; 1008 T; 0 other;
u34248 Length: 3535 04-MAR-2000 Type: N Check: 6430 ..
1 gcgcaccggg gatcctaggc ttttaactaa cgcattacag agggattcaa
51 ccctgtgcaa ttcaaagtca cagtttttgt gacagttagt tgtcaacccc
101 ctttttgaca accattatgg gtcaagtcat tgggttcttc caatccttac
151 ccaacatcat taatgaggca ctaaacattg ccctcatctg tgtggcatta
201 attgccatat tgaaaggtat tgttaacata tggaaatcag gtctgattca
251 gctgttcata ttcctcatcc tagcggggag gagctgttct cacacctttc
301 agattggccg aaaccatgag ttccaaagta tcactctaaa cttcacacag
351 tttttgggct acgcacccag ctcctgttct gttaacaaca ctcatcacta
401 ctttagaggt cctggcaatg tctcttgggg catcgagctc acattgacca
451 acaactccgt gatcaatgca agcaactcac tgaaggtgtt caccaacatt
501 caccacaaca tcaccaactg cgttcagaat atcgatgagc aagaccacct
551 aatgaaatgg ctcatagaaa caatgcatct acagatcatg aaaccaggaa
601 agagactacc accaatcctg tgtgagaaag acaaagggtt actaattgaa
651 tacaacctaa ccaacattgc atctcgcgaa gaaaagcact ctgagtactg
701 gagccaactt ctctatggtc tatcaaaact attaggctcc agtaagtcat
751 tgtggtttga ttactgtcag agagcagatt gcatgatgca agagcacagc
801 tcacacttga agtgcaacta ctcagagtgt tctggccata ccaccttcaa
851 atacctcatt ctacaaaaca ccacttggga gaaccattgt gagttcaacc
901 atctaaacac aattcacctg ttgatgagct ctactggtca gtctttcata
951 actagaaggt tgcaggcttt tctaacttgg actttgtcag atgctacagg
1001 caatgacctc cctgggggtt actgcctaga gcagtgggcc atagtttggg
1051 caggcatcaa gtgctttggg aacacagcag ttgcaaagtg taatcaaaat
1101 catgactctg aattctgtga catgttgagg ctctttgatt acaataggaa
1151 tgctattaag agtctgaatg atcagtctca aagtcgtcta aatcttctaa
1201 caaatacaat aaattcactg atttcggata atctgttgat gaaaaacaag
1251 ttggctgaga taatgaacat tccgtattgc aattacacaa aattctggta
1301 catcaacgac actaggactg gaaggcacac ccttccccaa tgctggttaa
1351 tctcaaatgg gtcttacttg aatgagacta aattcagaac tcagtggctg
1401 tcagagagca atgcactcta tacagaaatg ctaacagaag attatgacaa
1451 aaggcagggt agcacaccac tctccttggt tgatctatgt ttttggtcaa
1501 ccttattcta tgtgaccaca ttgtttgctc atcttgttgg tttcccaaca
1551 cacagacaca tcttagatgg tccttgccct aaaccccaca gattaacaaa
1601 gaaaggaatt tgttcctgtg gacattttgg aataccgggc aaacctgttc
1651 gatgggtgaa acgatcacgg tgagtcttca ggctccccat cactctgggc
1701 ccattgggcc cagggtgatg gggcggcccc ctcgacccac ggcaaaaccg
1751 tgggccgagg gggggtgcat ttacattgca accactgatt cagacttaaa
1801 cactagagca cttggaagta gaggcttggg ctctatgctt ggcacattgc
1851 cctcaaatgc tgcttgaaac atgagacagt caagcagtgc acaatgaggt
1901 tcacctgaat tgccaccttt cttctttctt gaaagcacaa caccattgtg
1951 tttagtgcaa agtgatccaa atttctccca aacaacactc tcatagaatc
2001 ttgcttggtc tgttgggaag ctgagatcaa ttgtggagat gtcaggtctt
2051 ccattcagtt ccattagttt tttgatgtca tcagaacctt gacatgtcaa
2101 aactaatttt gaaggcagct tgattagaat tctgctcagc aggcctgatc
2151 ttgcgttctc gatgtctctc agtaaaattc catgagagta tttgcttcca
2201 tttttgaagc ccttctcatc atgtgggagt ctgaagcaat gtatgtagta
2251 accagttgtg ggctgataca aagcaagctc aacagggtct gttggtgggc
2301 cctcaatatc cacccagatg gtttcatctg gattcagctt tgagattgct
2351 tctttgatca ctgcttcctg tgtgtctgtc aaaggattaa gtcttatgtt
2401 gccaccattt ttgacaggtg ggggaggacc atacatgaca tcttttgaga
2451 agtcaatagt ggtgttatcc caagctctgc ctgtgatctg ggatcttgag
2501 ccaatgtatg gccaaccttc accagagagg caaatcttgt aaaggatgtt
2551 ctcataggga ttcctcatcc ctggtttttc tgagacaaac attctttctt
2601 gatgcttcac cctaaggagg gatttgatga tgtcagcaaa cacatctggc
2651 ttaacataga ttgtttccaa catgtttccc ccatcaacca gacatgcacc
2701 ggctttcact gcagcagcaa gactcagatt gtacccagag atgttgttag
2751 cactttcctc tcttgtgatg aattggagac aagtgtgttc agcagacagc
2801 ttttcaagat catcaaggtt ggggtatttg actgtgtaaa ggagcccaag
2851 tgtggtcaaa ccttgtacca catcattcat ctgttcagct ccttgcactg
2901 acatgcaagc aattgtcaaa gcaggcattg atccaaactg attgatcaat
2951 tgcttctgat ccttaatgtc ccagatcctt accacaccgt tgttttgacc
3001 ttgtctggac tgaaacccaa gggatctcag tatagctgag cgcctgtcca
3051 gttgagcagt tgtgagattc ccttggtaaa caccaggggt gctcctttca
3101 ttcgtgttga tcttcctctt cagtttttcc agatcagttg ctaactccat
3151 gagttcatcc ttggaaagac ctccaacctt cagtgaaaca ttgctttgtt
3201 tgtttctcat catcatcaaa ccatcaactg ctttgttaag atctctgagc
3251 ttcaggagat catcatcaga cctccgttct ttcctcatca ctcgctgaac
3301 ttgcgagact tgactgaagt caagtccgtc caccagagac tttgcatcac
3351 gcaagacatc tcctttggtt tgagtggtgt agtgactcag gcctcgcctc
3401 agtgactgag tccatctgaa gctgggtatg tcacttgcac cagacattgt
3451 gcgagacaat ggtgagaggt gtcgtgtgac aaaaggtttg taaaagagca
3501 aagcgttatc ctatatgcct aggatccact gtgcg