Sequence of DPV Chino del tomate virus
Chino del tomate virus, component B, complete sequence.
ACC No: U57458
Dated: 2000-03-04 | Length: 2576 | CRC: -990516650
!!NA_SEQUENCE 1.0
ID CD57458 standard; DNA; VRL; 2576 BP.
XX
AC U57458;
XX
SV U57458.1
XX
DT 12-JUN-1996 (Rel. 48, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 6)
XX
DE Chino del tomate virus, component B, complete sequence.
XX
KW .
XX
OS Chino del tomate virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2576
RA Torres-Pacheco I., Garzon-Tiznado J.A., Brown J.K., Becerra-Flora A.,
RA Rivera-Bustamante R.F.;
RT "Detection and distribution of geminiviruses in Mexico and the Southern
RT United States";
RL Phytopathology 86:1186-1192(1996).
XX
RN [2]
RP 1-2576
RA Brown J.K., Torres-Pacheco I., Rivera-Bustamante R.F.;
RT ;
RL Submitted (02-MAY-1996) to the EMBL/GenBank/DDBJ databases.
RL R.F. Rivera-Bustamante, Ingenieria Genetica, CINVESTAV Irapuato, Apdo
RL Postal 629, Irapuato, GTO 36500, Mexico
XX
DR SPTREMBL; Q65985; Q65985.
DR SPTREMBL; Q65986; Q65986.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2576
FT /db_xref="taxon:47838"
FT /organism="Chino del tomate virus"
FT CDS 452. .1222
FT /codon_start=1
FT /db_xref="SPTREMBL:Q65985"
FT /note="BR1, BV1; nuclear shuttle protein"
FT /gene="BR1"
FT /product="BR1"
FT /protein_id="AAB66662.1"
FT /translation="MYPFRSKRGATFVARRSYSRNNLFKRSTISKRDDGRRRSVNATKP
FT NDEPKMTAQRMHENQFGPDFVMAHNSALETFISFPCLGKTQPNRSRSYIKLKRLRFKGT
FT VKIERVTSDMNMDGSTPKVEGVFSLVVVVDRKPHLGASGSLHTFDELFGARIHSHGNLS
FT IPPSLKDRFYIRHVFKRVLSVEKDSMMVDVEGSTALSNRRFNCWSTFKDLDRDSCNGVY
FT GNISKNALLVYYCWMSDTMSRVSSFVSFDLDYIG"
FT CDS complement(1241. .1972)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q65986"
FT /note="BL1, BC1; cell-to-cell movement protein"
FT /gene="BL1"
FT /product="BL1"
FT /protein_id="AAB66663.1"
FT /translation="MKIDHCVIEYRQQVPINATGTVIVEIHDKRMTENESLQASWTFPI
FT RCNIDLHYFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPF
FT RAPTVKILSKQFTDKDVDFFHVDYGRWERKHIRCASMSRVGLRGPIEIKPGESWASRSA
FT IVTGQSDADSEVENERHPYRHLNRLGTNILDPGESASIVGARRAESNITMSMGQLNELV
FT RTTVQECINSNCKLLSPKSLQ"
XX
SQ Sequence 2576 BP; 639 A; 547 C; 586 G; 804 T; 0 other;
U57458 Length: 2576 December 21, 2001 15:59 Type: N Check: 826 ..
1 accggatggc cgcgcgattt ttctccccct ctacgtggac ggccgcgatt
51 gtctctctcg ccagctggtg cgcattaatc cctccttctc tctctcttgg
101 tggccctctc aacgtggcgt ctctctattg gtccttttcc cgctacaatg
151 ggccattttg tcaatgagta tttatctatc gctttaattc aaattaaagc
201 ttaatacttt catgtctgac gaccggattt gaatttgaga ctatgtgtgt
251 tgtcttttga tgaggcccat tgtactatgt ggcgacgtgg ctgatttgag
301 acgcgctgct gagtcaagtt aagtcttatt ttcaattagc cctttctata
351 tattgggtcc gactgatata ttatattcgt tgtgactcag cagtcttcca
401 cgcttgattg ttaactaaac taacattttt gataaagtgt tacatctgat
451 aatgtatcct tttcggtcta agcgtggtgc cacgtttgtt gcacgtcgtt
501 cctattcacg taataatttg tttaagcgat caaccatctc caaacgagat
551 gatgggagac gtcgatctgt taatgcaact aagcccaatg acgagccgaa
601 gatgacagcc caacgcatgc acgagaatca gtttgggcct gattttgtaa
651 tggcccataa ttcagcattg gaaactttca tcagcttccc ttgtttgggt
701 aagactcaac cgaaccgaag caggtcgtat atcaagttga aacggctgcg
751 tttcaaaggt acggtgaaga tcgaacgcgt cacgtctgat atgaacatgg
801 atggttctac ccccaaggtc gaaggagttt tctccctcgt tgtcgttgtg
851 gatcgaaaac cccatctggg tgcgtccggc agtctacata ctttcgatga
901 actatttggc gctaggatcc acagccatgg aaacctcagc ataccccctt
951 ctttgaaaga ccgtttttac ataagacacg tgttcaaacg tgtactgtct
1001 gtggagaagg atagtatgat ggttgacgtt gaagggtcca cagctctctc
1051 taacaggcgt ttcaattgtt ggtccacgtt taaggatctg gatcgtgatt
1101 catgtaacgg cgtttatggt aacatcagca agaacgccct gttagtctat
1151 tattgttgga tgtcagatac tatgtctagg gtgtcaagtt ttgtatcgtt
1201 tgacctcgat tatatcgggt gattaataaa taagaatatt ttattgcaac
1251 gattttgggc tgagaagctt acaattacta ttaatacatt cttggaccgt
1301 agtccttaca agttcgttta attggcccat ggacattgta atgttcgact
1351 ccgctctccg ggctcccact attgaagcag actctccagg gtctaaaatg
1401 ttggtcccca gcctatttag atgtctgtat gggtgacgct cgttctcgac
1451 ctctgagtcc gcatctgatt gacccgttac tattgcactc ctggaagccc
1501 aagactcacc aggctttatc tcaattgggc ctcggagccc aactcttgac
1551 atggacgcac atctgatgtg cttcctttcc catcttccgt agtctacatg
1601 aaaaaagtcg acgtctttgt ctgtgaactg tttggatagg atcttgaccg
1651 tcggtgccct aaacggaata tccactgaat gtttcgccgt cgacaatttc
1701 agtttccctt tgaatttcgc gaagtgggtc ctctgatgaa cgttcgtatc
1751 gcaaactctg taatagagtt tccatggaat tgggtctttg agcgaaaaga
1801 aggatgccga gaagtagtgg agatctatgt tgcatctgat cggaaaagtc
1851 catgacgcct gtaacgattc gttttccgtc attctcttgt cgtgaatctc
1901 cacaattacc gtcccggtgg cgttaatcgg aacctgctgc ctgtattcta
1951 tgacgcagtg gtcgatcttc atacagctcc gacttatcct ggccgtgaac
2001 tgcgacgccg ttgacggaaa ttgcagaacg atctcagtca gatcatgtga
2051 cagctgatat tcgtcctgtg actttctatg taattgaaag cgttaggagg
2101 aaatgcaagc tgagattcca ttagaaaatt aaaggccgcg caaccgaagg
2151 ctgaagttga actgttgatg aacaaattaa gatttgtttg ggaagacact
2201 cgacgaagaa ccttgtgaag aagaagaagg ttttctgggt tttccagaaa
2251 ttaactgaag aactgaagaa tatctgtatg tttatttctt ttaaatatgt
2301 gtattgtttt tgagaaagag gagaaatctg gtaaagattt tcattttgat
2351 tatcgattag atctgatggt ctttatatag aaaacccgca ttctctgttt
2401 tgagagcttt cgggagaagt tagagacatt taaccgatgg catttttgta
2451 ataagagggg tgtactccga ttgagctctc aaacttctgt gctatgtttt
2501 ggggtaaagg ggacaatata tactagaact cttagtagca ctttagcgac
2551 acgtggcggc catccgatat aatatt