Sequence of DPV Influenza A virus

Influenza A virus H3N2 strain A/Akita/1/94 M1 protein and M2 protein genes, complete cds.

ACC No: U65564

Dated: 2000-03-04 | Length: 982 | CRC: -1526102092

                !!NA_SEQUENCE 1.0
ID   U65564     standard; genomic RNA; VRL; 982 BP.
XX
AC   U65564;
XX
SV   U65564.1
XX
DT   01-DEC-1998 (Rel. 57, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza A virus H3N2 strain A/Akita/1/94 M1 protein and M2 protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Influenza A virus H3N2
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC   Influenza A viruses; Influenzavirus A; Influenza A virus; H3N2 subtype.
XX
RN   [1]
RP   1-982
RX   MEDLINE; 98406205.
RX   PUBMED; 9733841.
RA   Lindstrom S.E., Hiromoto Y., Nerome R., Omoe K., Sugita S., Yamazaki Y.,
RA   Takahashi T., Nerome K.;
RT   "Phylogenetic analysis of the entire genome of influenza A (H3N2) viruses
RT   from Japan: evidence for genetic reassortment of the six internal genes";
RL   J. Virol. 72(10):8021-8031(1998).
XX
RN   [2]
RP   1-982
RA   Lindstrom S.E.;
RT   ;
RL   Submitted (30-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL   Virology 1, National Institute of Health, 1-23-1 Toyama Shinjuku-ku, Tokyo
RL   162, Japan
XX
DR   GOA; Q89519.
DR   GOA; Q89886.
DR   SPTREMBL; Q89519; Q89519.
DR   SPTREMBL; Q89886; Q89886.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .982
FT                   /chromosome="segment 7"
FT                   /db_xref="taxon:41857"
FT                   /mol_type="genomic RNA"
FT                   /organism="Influenza A virus H3N2"
FT                   /strain="A/Akita/1/94"
FT   CDS             join(1. .26,715. .982)
FT                   /codon_start=1
FT                   /db_xref="GOA:Q89519"
FT                   /db_xref="SPTREMBL:Q89519"
FT                   /function="transmembrane ion channel"
FT                   /product="M2 protein"
FT                   /protein_id="AAC80160.1"
FT                   /translation="MSLLTEVETPIRNEWGCRCNDSSDPLVVAASIIGILHLILWILDR
FT                   LFFKCIYRLFKHGLKRGPSTEGVPESMREEYRKEQQNAVDADDSHFVSIELE"
FT   CDS             1. .759
FT                   /codon_start=1
FT                   /db_xref="GOA:Q89886"
FT                   /db_xref="SPTREMBL:Q89886"
FT                   /note="matrix protein"
FT                   /product="M1 protein"
FT                   /protein_id="AAC80159.1"
FT                   /translation="MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEW
FT                   LKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYRKLK
FT                   REITFHGAKEIALSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSHR
FT                   QMVATTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEIASQARQMVQAMRAIGTH
FT                   PSSSAGLKDDLLENLQTYQKRMGVQMQRFK"
XX
SQ   Sequence 982 BP; 279 A; 209 C; 259 G; 235 T; 0 other;

  U65564  Length: 982  January 8, 2004 16:01  Type: N  Check: 3881  ..

       1  atgagccttc taaccgaggt cgaaacgtat gttctctcta tcgttccatc
      51  aggccccctc aaagccgaaa tcgcgcagag acttgaagat gtctttgctg
     101  ggaaaaacac agatcttgag gctctcatgg aatggctaaa gacaagacca
     151  atcctgtcac ctctaactaa ggggattttg gggtttgtgt tcacgctcac
     201  cgtgcccagt gagcgaggac tgcagcgtag acgctttgtc caaaatgccc
     251  tcaatgggaa tggggatcca aataacatgg acagagcagt taaactatat
     301  agaaaactta agagggagat tacattccat ggggccaaag aaatagcact
     351  cagttattct gctggtgcac ttgccagttg catgggcctc atatacaaca
     401  ggatgggggc tgtgaccact gaagtggcct ttggcctggt atgtgcaaca
     451  tgtgaacaga ttgctgactc ccagcacagg tctcataggc aaatggtggc
     501  aacaaccaat ccattaataa ggcatgagaa cagaatggtt ttggccagca
     551  ctacagctaa ggctatggag caaatggctg gatcaagtga gcaggcagcg
     601  gaggccatgg aaattgctag tcaggccagg caaatggtgc aggcaatgag
     651  agccattggg actcacccca gctccagtgc tggtctaaaa gatgatcttc
     701  ttgaaaattt gcagacctat cagaaacgaa tgggggtgca gatgcaacga
     751  ttcaagtgac ccgcttgttg ttgctgcgag tatcattggg atcttgcact
     801  tgatattgtg gattcttgat cgtctttttt tcaaatgcat ctatcgactc
     851  ttcaaacacg gcttgaaaag agggccttct acggaaggag tacctgagtc
     901  tatgagggaa gaatatcgaa aggaacagca gaatgctgtg gatgctgacg
     951  acagtcattt tgtcagcata gagctggagt aa