Sequence of DPV Chrysanthemum stunt viroid

Chrysanthemum stunt viroid, Petunia isolate, complete genome.

ACC No: U82445

Dated: 2000-03-04 | Length: 355 | CRC: 1736316917

                !!NA_SEQUENCE 1.0
ID   CSU82445   standard; RNA; VRL; 355 BP.
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AC   U82445;
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SV   U82445.1
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DT   22-JAN-1997 (Rel. 50, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 5)
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DE   Chrysanthemum stunt viroid, Petunia isolate, complete genome.
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KW   .
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OS   Chrysanthemum stunt viroid
OC   Viroids.
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RN   [1]
RP   1-355
RA   Verhoeven J.T.H.J., Arts M.-J., Owens R.A., Roenhurst J.W.;
RT   "Natural infection of petunia by chrysanthemum stunt viroid";
RL   Eur. J. Plant Pathol. 0:0-0(1996).
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RN   [2]
RP   1-355
RA   Owens R.A., Verhoeven J.T.H.J., Arts M.-J., Roenhurst J.W.;
RT   ;
RL   Submitted (17-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Plant Pathology Laboratory, Beltsville Agricultural Research
RL   Center, 10300 Baltimore Avenue, Beltsville, MD 20705, USA
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RN   [3]
RC   Sequence update by submitter
RP   1-355
RA   Owens R.A., Verhoeven J.T.H.J., Arts M.-J., Roenhurst J.W.;
RT   ;
RL   Submitted (27-JAN-1998) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Plant Pathology Laboratory, Beltsville Agricultural Research
RL   Center, 10300 Baltimore Avenue, Beltsville, MD 20705, USA
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CC   On Jan 27, 1998 this sequence version replaced gi:1773356.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .355
FT                   /db_xref="taxon:12897"
FT                   /note="sequence was determined by direct sequencing of
FT                   uncloned PCR products; the primer binding sites were not
FT                   directly determined"
FT                   /organism="Chrysanthemum stunt viroid"
FT                   /strain="Petunia isolate"
FT                   /specific_host="Petunia X hybrida cv. Surfinia purple"
FT   primer_bind     66. .110
FT   misc_difference 128
FT                   /note="this isolate appears to contain two predominant
FT                   sequence variants, one having a chain length of
FT                   355~nucleotides (sequence shown below); in less than half
FT                   the molecules in this isolate, the oligo(G) sequence
FT                   between positions 128-132 appears to contain only four G
FT                   residues; these shorter molecules contain only 354
FT                   nucleotides"
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SQ   Sequence 355 BP; 72 A; 96 C; 91 G; 96 T; 0 other;

 U82445  Length: 355  December 21, 2001 16:00  Type: N  Check: 6364  ..

       1  cgggacttac ttgtggttcc tgtggtgcac tcctgaccct gctgctttga
      51  aagaaaaaga aatagggcga agaagtcctt cagggatccc cggggaaacc
     101  tggaggaagt ccgacgagat cgcggttggg ggcttaggac cccactcctg
     151  cgagacagga gtaatcctaa acagggtttt cacccttcct ttagtttcct
     201  tcctctcctg gagaggtctt ctgccctagc ccggtcttcg aagcttcctt
     251  tggctactac ccggtggaaa caactgaagc ttcaacgcct ttttttccta
     301  tcttctttag caccgggcta gggagtaagc ccgtggaacc ttagttttgt
     351  tccct