Sequence of DPV Turnip yellow mosaic virus

Turnip yellow mosaic virus variant P1, virion protein (VP) gene, complete cds.

ACC No: U88849

Dated: 2005-04-18 | Length: 676 | CRC: -31465685

                !!NA_SEQUENCE 1.0
ID   TYU88849   standard; genomic RNA; VRL; 676 BP.
XX
AC   U88849;
XX
SV   U88849.1
XX
DT   13-MAR-1997 (Rel. 51, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Turnip yellow mosaic virus variant P1, virion protein (VP) gene, complete
DE   cds.
XX
KW   .
XX
OS   Turnip yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC   Tymovirus.
XX
RN   [1]
RP   1-676
RA   Hayden C.M., Mackenzie A.M., Gibbs A.J.;
RT   ;
RL   Submitted (07-FEB-1997) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Evolution and Systematics Group, Research School of Biological
RL   Sciences, The Australian National University, Canberra, A.C.T. 0200,
RL   Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .676
FT                   /db_xref="taxon:12154"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip yellow mosaic virus"
FT                   /strain="variant P1"
FT   CDS             1. .570
FT                   /codon_start=1
FT                   /db_xref="GOA:Q6LC39"
FT                   /db_xref="HSSP:1AUY"
FT                   /db_xref="InterPro:IPR000574"
FT                   /db_xref="InterPro:IPR008975"
FT                   /db_xref="UniProt/TrEMBL:Q6LC39"
FT                   /gene="VP"
FT                   /product="virion protein"
FT                   /protein_id="AAB49374.1"
FT                   /translation="MEIDKELAPQDRTVTVATVLPTVPGPSPFTIKQPFQSEVLFAGTK
FT                   DAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPAFPTTVGVCWVPANSPVTP
FT                   TQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPKLLISITAQPTA
FT                   PPASTCIITVSGTLSMHSPLITDTST"
XX
SQ   Sequence 676 BP; 153 A; 257 C; 117 G; 149 T; 0 other;

   U88849  Length: 676  May 10, 2005 10:09  Type: N  Check: 2676  ..

       1  atggaaatcg ataaagaact cgccccccaa gaccgcactg tcaccgtcgc
      51  caccgtttta ccaactgtcc ccggcccctc acctttcacc atcaaacaac
     101  cgttccagtc tgaagttctg tttgctggga ccaaagatgc cgaggcctct
     151  ctcaccatcg ccaacatcga cagcgtttcc acccttacca ccttctaccg
     201  tcatgcctct ctggaatcac tctgggttac catccatccc accttgcaag
     251  ccccggcttt cccgaccacg gtcggcgttt gctgggtacc cgccaactcc
     301  ccagtcactc ccacccagat caccaagacc tacggcggcc agatcttctg
     351  cattggaggc gccatcaaca ctctctcacc cctcatcgtc aagtgcccac
     401  ttgaaatgat gaacccccgg gtcaaagatt caattcaata ccttgactcg
     451  cccaaactcc tcatctccat caccgctcaa cccaccgctc cccccgcatc
     501  gacctgcata ataactgtat caggaactct ctcgatgcac tctccgctca
     551  tcacggacac ttccacctaa gttctcgatc tttaaaatcg ttagctcgcc
     601  agttagcgag gtctgtcccc acacgacaga taatcgggtg caactcccgc
     651  cccttttccg agggtcatcg gaacca